BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00038965
         (479 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008345098.1| PREDICTED: uncharacterized protein LOC103408...    61   4e-07
ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein A...    60   5e-07
ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein A...    60   6e-07
ref|XP_010507125.1| PREDICTED: uncharacterized protein LOC104783...    60   8e-07
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    59   2e-06
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    59   2e-06
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    59   2e-06
ref|XP_008364397.1| PREDICTED: putative ribonuclease H protein A...    58   2e-06
ref|XP_010430818.1| PREDICTED: uncharacterized protein LOC104715...    58   3e-06
ref|XP_010431104.1| PREDICTED: uncharacterized protein LOC104715...    57   7e-06

>ref|XP_008345098.1| PREDICTED: uncharacterized protein LOC103408003 [Malus domestica]
          Length = 313

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
 Frame = -1

Query: 455 SFGI-QIWKHRNSLIFNDCNKSISTVINEIQNQMWDLHVVLTQNNSTRISRTDQVAQTHV 279
           +FG+ ++WK+RN ++FN  ++    V+   +  +++    L    S  +   DQ+   ++
Sbjct: 97  AFGLWRLWKNRNDVVFNGVHRQHLEVMMLWRKNIYEFREAL----SLSLKCEDQLISNNL 152

Query: 278 TLNLGNK--WNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAGIPAVLIS 105
                 +  W  P+   IK N DAA+  +S+     +GW+ R++ G  Q+A G    +  
Sbjct: 153 KTEQSPRLHWTKPKFGTIKVNTDAAWCCSSLR--TGVGWVGRDFAGLLQFAGGSGTSICH 210

Query: 104 SPFATEAAALMDAMKHALLSNIIKATFEFDCLSL 3
           S  A EA A+  A+  ++ +   K   E D L +
Sbjct: 211 SAAAAEACAIRSALVSSIENGCDKVIIESDALGI 244


>ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 883

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
 Frame = -1

Query: 455  SFGI-QIWKHRNSLIFNDCNKSISTVINEIQNQMWDLHVVLTQNNSTRISRTDQVAQTHV 279
            +FG+ ++WK+RN ++FN  ++    V+   +  +++    L    S  +   DQ+   ++
Sbjct: 654  AFGLWRLWKNRNDVVFNGVHRQHLEVMMLWRKNIYEFREAL----SLSLKCEDQLISNNL 709

Query: 278  TLNLGNK--WNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAGIPAVLIS 105
                  +  W  P+   IK N DAA+  +S+     +GW+ R++ G  Q+A G    +  
Sbjct: 710  KTEQSPRLHWTKPKFGTIKVNTDAAWCSSSLR--TGVGWVGRDFAGLLQFAGGSGTSICH 767

Query: 104  SPFATEAAALMDAMKHALLSNIIKATFEFDCLSL 3
            S  A EA A+  A+  ++ +   K   E D L +
Sbjct: 768  SAAAAEACAIRSALVSSIENGCDKVIIESDALGI 801


>ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 806

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
 Frame = -1

Query: 455  SFGI-QIWKHRNSLIFNDCNKSISTVINEIQNQMWDLHVVLTQNNSTRISRTDQVAQTHV 279
            +FG+ ++WK+RN ++FN  ++    V+   +  +++    L    S  +   DQ+   ++
Sbjct: 626  AFGLWRLWKNRNDVVFNGVHRQHLEVMMLWRKNIYEFREAL----SLSLKCEDQLISNNL 681

Query: 278  TLNLGNK--WNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAGIPAVLIS 105
                  +  W  P+   IK N DAA+  +S+     +GW+ R++ G  Q+A G    +  
Sbjct: 682  KTEQSPRLHWTKPKFGTIKVNTDAAWCXSSLR--TGVGWVGRDFAGLLQFAGGSGTSICH 739

Query: 104  SPFATEAAALMDAMKHALLSNIIKATFEFDCLSL 3
            S  A EA A+  A+   + +   K   E D L +
Sbjct: 740  SAAAAEACAIRSALVSXIENGCDKVIIESDALGI 773


>ref|XP_010507125.1| PREDICTED: uncharacterized protein LOC104783701 [Camelina sativa]
          Length = 222

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
 Frame = -1

Query: 443 QIWKHRNSLIFNDCNKS-ISTVINEIQN-QMWDLHVVLTQNNSTRISRTDQVAQTHVTLN 270
           ++W  RN L+F   + S +ST++   Q+ + W       Q+ S  I     + +T  T  
Sbjct: 26  RLWTSRNYLVFQQRSYSWLSTLVKARQDAEEWIQVQEYIQSLSCEIVPPGPINRTATTTT 85

Query: 269 LGNKWNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAGIPAVLISSPFAT 90
              +W  P +  IK+N D  +  N++T+    GWI  N  G    A     ++ +SP  +
Sbjct: 86  ---RWQQPPIGWIKFNYDGYY--NTVTRQSKAGWILGNERGVFIDAGQATGIMTTSPLDS 140

Query: 89  EAAALMDAMKHALLSNIIKATFEFDCLSL 3
           E  A + AM+H+      K  FE DC S+
Sbjct: 141 ELQAFLIAMQHSWCKGFRKVIFEGDCKSI 169


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 39/147 (26%), Positives = 67/147 (45%)
 Frame = -1

Query: 443 QIWKHRNSLIFNDCNKSISTVINEIQNQMWDLHVVLTQNNSTRISRTDQVAQTHVTLNLG 264
           +IWK RN+++FN   +S S  +   + +  D  +  TQ++    S T Q+A+  +     
Sbjct: 271 RIWKARNNVVFNKFRESPSKTVLSAKAETHDW-LNATQSHKKTPSPTRQIAENKI----- 324

Query: 263 NKWNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAGIPAVLISSPFATEA 84
            +W  P    +K N DA F +  +    + GWI RN+ G       +     S+P   E 
Sbjct: 325 -EWRNPPATYVKCNFDAGFDVQKLE--ATGGWIIRNHYGTPISWGSMKLAHTSNPLEAET 381

Query: 83  AALMDAMKHALLSNIIKATFEFDCLSL 3
            AL+ A++   +    +   E DC +L
Sbjct: 382 KALLAALQQTWIRGYTQVFMEGDCQTL 408


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 39/147 (26%), Positives = 67/147 (45%)
 Frame = -1

Query: 443  QIWKHRNSLIFNDCNKSISTVINEIQNQMWDLHVVLTQNNSTRISRTDQVAQTHVTLNLG 264
            +IWK RN+++FN   +S S  +   + +  D  +  TQ++    S T Q+A+  +     
Sbjct: 1311 RIWKARNNVVFNKFRESPSKTVLSAKAETHDW-LNATQSHKKTPSPTRQIAENKI----- 1364

Query: 263  NKWNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAGIPAVLISSPFATEA 84
             +W  P    +K N DA F +  +    + GWI RN+ G       +     S+P   E 
Sbjct: 1365 -EWRNPPATYVKCNFDAGFDVQKLE--ATGGWIIRNHYGTPISWGSMKLAHTSNPLEAET 1421

Query: 83   AALMDAMKHALLSNIIKATFEFDCLSL 3
             AL+ A++   +    +   E DC +L
Sbjct: 1422 KALLAALQQTWIRGYTQVFMEGDCQTL 1448


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 39/147 (26%), Positives = 67/147 (45%)
 Frame = -1

Query: 443  QIWKHRNSLIFNDCNKSISTVINEIQNQMWDLHVVLTQNNSTRISRTDQVAQTHVTLNLG 264
            +IWK RN+++FN   +S S  +   + +  D  +  TQ++    S T Q+A+  +     
Sbjct: 1537 RIWKARNNVVFNKFRESPSKTVLSAKAETHDW-LNATQSHKKTPSPTRQIAENKI----- 1590

Query: 263  NKWNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAGIPAVLISSPFATEA 84
             +W  P    +K N DA F +  +    + GWI RN+ G       +     S+P   E 
Sbjct: 1591 -EWRNPPATYVKCNFDAGFDVQKLE--ATGGWIIRNHYGTPISWGSMKLAHTSNPLEAET 1647

Query: 83   AALMDAMKHALLSNIIKATFEFDCLSL 3
             AL+ A++   +    +   E DC +L
Sbjct: 1648 KALLAALQQTWIRGYTQVFMEGDCQTL 1674


>ref|XP_008364397.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 342

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
 Frame = -1

Query: 455 SFGI-QIWKHRNSLIFNDCNKSISTVINEIQNQMWDLHVVLTQNNSTRISRTDQVAQTHV 279
           +FG+ ++WK+RN  +FN   +    V+N     +W   +   +  +TR +  D++ +   
Sbjct: 197 AFGLWRLWKNRNETVFNGTQQQPLEVLN-----IWRSSLAEFREATTRTADGDRLLRDSG 251

Query: 278 TLNL---GNKWNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAG 126
           TL +   G +W  PE   IK N DAA+ +N++   + +GW+ R++ G  Q A G
Sbjct: 252 TLEVRRQGARWTKPEFGFIKVNTDAAWCMNTLR--MGVGWVCRDFAGVLQAAGG 303


>ref|XP_010430818.1| PREDICTED: uncharacterized protein LOC104715064 [Camelina sativa]
          Length = 392

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 41/149 (27%), Positives = 65/149 (43%)
 Frame = -1

Query: 449 GIQIWKHRNSLIFNDCNKSISTVINEIQNQMWDLHVVLTQNNSTRISRTDQVAQTHVTLN 270
           G QIWK RN LIFN      S+V+ +  + + +  +  TQ +  R  R      +     
Sbjct: 195 GWQIWKSRNDLIFNKITWETSSVLLKATDDVVE-WLAATQPSIQRPPRNSPTVHSP---- 249

Query: 269 LGNKWNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAGIPAVLISSPFAT 90
             ++W  P  E++K N D +F  +S    + +GWI    +G    +        S+P  T
Sbjct: 250 -SSQWTLPTTEVVKVNFDGSF--HSHNGSIGVGWIIHGDKGTYLLSRSSKLKQASNPLWT 306

Query: 89  EAAALMDAMKHALLSNIIKATFEFDCLSL 3
           E  AL+ A++        K   E DC +L
Sbjct: 307 ERLALLHAIQSTWCCGYRKVILEGDCKAL 335


>ref|XP_010431104.1| PREDICTED: uncharacterized protein LOC104715396 [Camelina sativa]
          Length = 276

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
 Frame = -1

Query: 440 IWKHRNSLIFNDCNKSISTVINEIQNQM--WDLHVVLTQNNSTRISRTDQVAQTHVTLNL 267
           IWK RN+ IF++ ++  + ++   +  +  W   V+L  +    IS+      TH     
Sbjct: 79  IWKTRNNFIFDEKSEDPNHIVWRARADVREWCRVVLLPHDPPPLISKP-----TH----- 128

Query: 266 GNKWNAPEVEIIKYNMDAAFPLNSITKVVSIGWISRNYEGQTQYAAGIPAVLISSPFATE 87
              WN P   ++K N DA+F  + IT     GWI R+Y G +           SSP   E
Sbjct: 129 ---WNRPPQTMLKCNFDASF--DPITYETRGGWILRDYRGISNGWGAANMRYASSPLEAE 183

Query: 86  AAALMDAMKHALLSNIIKATFEFDC 12
             AL++AM+   +  I    FE DC
Sbjct: 184 GKALLNAMQQTWIRGIRHVIFEGDC 208