BLASTX nr result

ID: Aconitum23_contig00038509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00038509
         (376 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010662698.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    63   1e-07
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    63   1e-07
ref|XP_004298361.1| PREDICTED: putative F-box protein At5g55150 ...    59   1e-06
ref|XP_008366152.1| PREDICTED: F-box protein At2g26160-like [Mal...    56   9e-06

>ref|XP_010662698.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 401

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
 Frame = -1

Query: 346 YSYYLCKAVLSSDPLLS-DEFVVVAIMSRFCGLAFFKSGNKDWISIGNW-QKDWELDRI- 176
           + Y+L K VLS++P  + D+FV++ I     GLAF KSG+++W  I +   KD  LD   
Sbjct: 145 FEYHLHKGVLSANPTSNPDDFVLMVIYGHDKGLAFIKSGDQNWAYIDSMVMKDDVLDSPY 204

Query: 175 --------FEDVIFSRKTKQLYALRMNNEVLVIDLEGGGEQPSLTQLMPPTNLNLDDDCP 20
                   FEDVI+  +  Q YAL  +++VL I   G G   ++ +++PP N        
Sbjct: 205 FLDLSLFGFEDVIYQERELQFYALSYDSQVLAIKTSGIG---NMVKVVPPYNFGFVP--A 259

Query: 19  LKMYLV 2
            K+YLV
Sbjct: 260 FKLYLV 265


>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
 Frame = -1

Query: 346 YSYYLCKAVLSSDPLLS-DEFVVVAIMSRFCGLAFFKSGNKDWISIGNW-QKDWELDRI- 176
           + Y+L K VLS++P  + D+FV++ I     GLAF KSG+++W  I +   KD  LD   
Sbjct: 272 FEYHLHKGVLSANPTSNPDDFVLMVIYGHDKGLAFIKSGDQNWAYIDSMVMKDDVLDSPY 331

Query: 175 --------FEDVIFSRKTKQLYALRMNNEVLVIDLEGGGEQPSLTQLMPPTNLNLDDDCP 20
                   FEDVI+  +  Q YAL  +++VL I   G G   ++ +++PP N        
Sbjct: 332 FLDLSLFGFEDVIYQERELQFYALSYDSQVLAIKTSGIG---NMVKVVPPYNFGFVP--A 386

Query: 19  LKMYLV 2
            K+YLV
Sbjct: 387 FKLYLV 392


>ref|XP_004298361.1| PREDICTED: putative F-box protein At5g55150 [Fragaria vesca subsp.
           vesca]
          Length = 220

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
 Frame = -1

Query: 346 YSYYLCKAVLSSDPLLS-DEFVVVAIMSRFCGLAFFKSGNKDWISIGNWQKDWELDRIFE 170
           Y YY+ K +LS+DP L+ D +VVVAI    C LAF ++G +DW  +       +   +F 
Sbjct: 34  YPYYVRKVILSADPSLNPDNYVVVAIYDICCKLAFIRAGQRDWTYL-------DEPYMFS 86

Query: 169 DVIFSRKTKQLYALRMNNEVLVIDLEGGGE--QPSLTQLMPPTNLNLDDDCPLK 14
           D IF R   Q+YA+    +++++D+    +  +P + + + P    L    P K
Sbjct: 87  DAIFYR--SQIYAVGQGGKIVLLDVNSSNDPSRPPIAKRLTPFGPILHPQFPCK 138


>ref|XP_008366152.1| PREDICTED: F-box protein At2g26160-like [Malus domestica]
           gi|658060622|ref|XP_008366153.1| PREDICTED: F-box
           protein At2g26160-like [Malus domestica]
          Length = 447

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
 Frame = -1

Query: 367 LPICGLLY-SYYLCKAVLSSDPLLS-DEFVVVAIMSRFCGLAFFKSGNKDWISIGNWQKD 194
           +P C   Y  +++ K +LS DP L+ D +VVVAI +    LA FK+G K W  I    K 
Sbjct: 196 IPKCVASYHEHFVRKVILSGDPSLNPDNYVVVAIYASDSRLAVFKAGQKSWHLI---VKS 252

Query: 193 WELDRIFEDVIFSRKTKQLYALRMNNEVLVIDLEGGGEQPSLTQLMPP 50
           +E      DVIF R   Q+YA  M   V ++D++  G QP   +L+ P
Sbjct: 253 FET----ADVIFYR--GQVYAASMRGRVSLLDIDNPGAQPPQLKLLTP 294


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