BLASTX nr result

ID: Aconitum23_contig00037195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00037195
         (457 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008366033.1| PREDICTED: LOW QUALITY PROTEIN: pollen-speci...    58   2e-06
ref|XP_006640207.1| PREDICTED: extensin-like, partial [Lepisoste...    58   2e-06
gb|EMC77216.1| hypothetical protein A306_15601, partial [Columba...    57   7e-06
ref|XP_012892395.1| PREDICTED: extensin-like, partial [Dipodomys...    56   9e-06

>ref|XP_008366033.1| PREDICTED: LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat
            extensin-like protein 3 [Malus domestica]
          Length = 922

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 50/141 (35%), Positives = 60/141 (42%), Gaps = 6/141 (4%)
 Frame = -2

Query: 456  PAPHHSSSLPWPVPAGHACVPIARCIPVTKPCPAPHTHVTW-HSPHTSVHTAPPSNSLPQ 280
            P P HS     P P  H+  P     PV  P P  H+      SP   VH+ PP    P 
Sbjct: 671  PPPIHS-----PPPPVHSPPP-----PVYSPPPPVHSPXPXVQSPSPPVHSLPPPVHSPP 720

Query: 279  APT-SRVSPLHLNIATSHFPATPAQCPGVPAQSVPASW-TPPPLPHI-SSPMHVPALCPV 109
             P  S  SP+H      H+P  P Q P  P  S+P    +PPPL H    P+H P  C +
Sbjct: 721  PPVHSLPSPIHSPPPPIHYPPPPVQSPSPPVHSLPPPMHSPPPLVHSPPPPIHSPPPCTL 780

Query: 108  -PIVAHFNNIN-KSLPTPMSS 52
             P   H+      SLP PM S
Sbjct: 781  RPPPFHYPPPPVHSLPPPMXS 801


>ref|XP_006640207.1| PREDICTED: extensin-like, partial [Lepisosteus oculatus]
          Length = 204

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/143 (31%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
 Frame = -2

Query: 447 HHSSSLPWPVPAGHACVPIARCIPVTKPCPAPHTHVTWHSPHTSVHTAPPSNSLPQAPTS 268
           H S   P P P  H+ +P     P+  P P PH+H     PH + H++ P   LP  P S
Sbjct: 18  HSSLPHPLPTPTPHSSLPH----PLPTPTPTPHSHTPSLLPHPTPHSSLP---LPH-PLS 69

Query: 267 RVSPLHLNIATSHFPATP---------AQCPGVPAQSVPASWTPPPLPHISSPMHVPALC 115
              PLH    T   P TP            P +     P S TP   PH  SP H P++ 
Sbjct: 70  H--PLH----TPALPPTPPPYSHSHSHTHTPSLLPHPTPHSHTPHRTPHSHSPSHTPSIL 123

Query: 114 PVPIVAHFNNINKSLPTPMSSAH 46
           P       +++   LPTP  + H
Sbjct: 124 P-------HSLPHLLPTPTPTPH 139


>gb|EMC77216.1| hypothetical protein A306_15601, partial [Columba livia]
          Length = 223

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 50/155 (32%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
 Frame = -2

Query: 450 PHHSSSLPWP-VPAGHACVPIARCIPVT-KPCP-APHTHVTWH-SPHTSVHTAPPSNSLP 283
           PH+ S  P P VP        ++C PV   PCP  P  H++   SP   V T P   S+P
Sbjct: 60  PHYISVPPCPHVPMSPHPHTTSQCHPVPMSPCPHTPTLHLSATLSPCPHVPTPPHYISVP 119

Query: 282 QAPTSRVSPLHLNIATSHFPATPAQCPGVPAQSVPASWTPPPLPHISSPMH---VPALCP 112
             P   +SP H +  +   P   + CP  P   + A  T  P PH+ +P H   VP    
Sbjct: 120 PCPHVPMSP-HPHTTSQCHPVPMSPCPHTPTLHLSA--TLSPCPHVPTPPHYISVPPCPH 176

Query: 111 VPIVAHFNNINKSLPTPMS------SAHMAAALHP 25
           VP+  H +  ++  P PMS      + H++A L P
Sbjct: 177 VPMSPHPHTTSQCHPVPMSPCPHTPTLHLSATLSP 211


>ref|XP_012892395.1| PREDICTED: extensin-like, partial [Dipodomys ordii]
          Length = 308

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 41/146 (28%), Positives = 53/146 (36%), Gaps = 9/146 (6%)
 Frame = -2

Query: 450 PHHSSSLPWPVPAGHACVPIARCIPVT------KPCPAPHTHVTWHSPHTSVHTAPPSNS 289
           PH +   P P PA    +P    +P T      +P PAP    T   PH ++H  PP  S
Sbjct: 36  PHPTLPRPHPAPAPTPTLPRPHPVPRTPHPTLPRPHPAPAPTPTLPRPHPTLHPTPP-RS 94

Query: 288 LPQAPTSRVSPLHLNIATSH---FPATPAQCPGVPAQSVPASWTPPPLPHISSPMHVPAL 118
            P  P       H  +   H    P  P   PG+PA    A     P PH +   H    
Sbjct: 95  APGLPAPHTRAPHPTLPRPHPTLHPTPPRSAPGLPAPRTRAPHPTLPRPHPTPNTHTHTA 154

Query: 117 CPVPIVAHFNNINKSLPTPMSSAHMA 40
              P  A    + +  P P +  H A
Sbjct: 155 QTTPHPAPTPTLPRPHPAPNTHTHTA 180


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