BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00035759
         (402 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...   106   6e-21
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   106   8e-21
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   103   5e-20
emb|CDP17738.1| unnamed protein product [Coffea canephora]            100   6e-19
gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposo...    81   3e-13
gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposo...    81   3e-13
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    81   3e-13
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         80   6e-13
emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera]    79   1e-12
emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera]    79   1e-12
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...    78   2e-12
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]    77   4e-12
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      77   4e-12
gb|KHN07003.1| Retrovirus-related Pol polyprotein from transposo...    77   7e-12
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...    77   7e-12
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         76   1e-11
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]                75   1e-11
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                 75   1e-11
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...    75   2e-11
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    75   2e-11

>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score =  106 bits (265), Expect = 6e-21
 Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = +2

Query: 68  VDKDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGD-ESDYSLAVASAYSS 244
           V KD+C  C EKGHW KDCP L               NVA+ + D ESD SL V+ + SS
Sbjct: 205 VAKDECAFCHEKGHWKKDCPKLQKKEKVPQD-----ANVAECKSDVESDISLIVSLSASS 259

Query: 245 CSGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
              EWILDSGC++H+CP R +F +F+++  G+V MGND+ C+  GIG+++++
Sbjct: 260 YPDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTAGIGSIKLR 311


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  106 bits (264), Expect = 8e-21
 Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = +2

Query: 68  VDKDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGD-ESDYSLAVASAYSS 244
           V KD+C  C EKGHW KDCP L               NVA+ + D ESD SL V+ + SS
Sbjct: 165 VAKDECAFCHEKGHWKKDCPKLQKKEKVPQD-----ANVAECKSDVESDISLIVSLSASS 219

Query: 245 CSGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
              EWILDSGC++H+CP R +F +F+++  G+V MGND+ C+  GIG+++++
Sbjct: 220 YPDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLR 271


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  103 bits (257), Expect = 5e-20
 Identities = 50/112 (44%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +2

Query: 68  VDKDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGD-ESDYSLAVASAYSS 244
           V KD+C  C EKGHW KDCP L               NVA+ + D ESD SL V+ + S 
Sbjct: 166 VAKDECAFCHEKGHWKKDCPKLQKKEKVLQD-----ANVAECKSDVESDISLIVSLSASL 220

Query: 245 CSGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
              EWILDSGC++H+CP R +F +F+++  G+V MGND+ C+  GIG+++++
Sbjct: 221 YLDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLR 272


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  100 bits (248), Expect = 6e-19
 Identities = 52/112 (46%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +2

Query: 68  VDKDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGD-ESDYSLAVASAYSS 244
           V KD+C  C EKGHW KDCP L              VNVA+ + D ESD+SLAV S  +S
Sbjct: 251 VAKDECAFCREKGHWKKDCPKLKKKGKAPQD-----VNVAECKSDAESDFSLAV-SRLTS 304

Query: 245 CSGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
              EWILDS C++H+ P R +F +FE++  G V MGND+ C+  GIG+++++
Sbjct: 305 HPDEWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGIGSIKLR 356


>gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 344

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 40/110 (36%), Positives = 61/110 (55%)
 Frame = +2

Query: 71  DKDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYSLAVASAYSSCS 250
           + ++C +C ++GHW ++CP L              V       +ESD    +  + +   
Sbjct: 226 NNNKCHNCQKEGHWKRNCPELKKDKVSTSEFGGAAV-----VSEESDGGNVLFVSSNVND 280

Query: 251 GEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
            +WILDS C+FH+ P+R +F+ F+ V  G VLMGND +C I G GTV+IK
Sbjct: 281 DDWILDSACTFHMTPNRDWFATFQNVDGGKVLMGNDGACSIAGKGTVQIK 330


>gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 341

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 40/110 (36%), Positives = 61/110 (55%)
 Frame = +2

Query: 71  DKDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYSLAVASAYSSCS 250
           + ++C +C ++GHW ++CP L              V       +ESD    +  + +   
Sbjct: 223 NNNKCHNCQKEGHWKRNCPELKKDKVSTSEFGGAAV-----VSEESDGGNVLFVSSNVND 277

Query: 251 GEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
            +WILDS C+FH+ P+R +F+ F+ V  G VLMGND +C I G GTV+IK
Sbjct: 278 DDWILDSACTFHMTPNRDWFATFQNVDGGKVLMGNDGACSIAGKGTVQIK 327


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 37/108 (34%), Positives = 58/108 (53%)
 Frame = +2

Query: 77  DQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYSLAVASAYSSCSGE 256
           D C +C EKGHW  DCP                  VA+++ +  +    VA  ++  S  
Sbjct: 223 DVCNYCKEKGHWKFDCP----KKKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDV 278

Query: 257 WILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
           W+LDSG S+HICP R +F+ +E+V  G + M N   C++ G G+++I+
Sbjct: 279 WVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIR 326


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
 Frame = +2

Query: 74  KDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYS--LAVASAYSSC 247
           K +C +C ++GH+I+DC                   VA  +G +   S  L VAS  S+ 
Sbjct: 233 KRKCFYCRKEGHYIRDC---FEKKKKESQEKSGDAAVASDDGSDGYQSADLLVASN-SNT 288

Query: 248 SGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGI 382
            G+W++DSGCSFH+CP+++ F K+E V  G VLMGN++ C I GI
Sbjct: 289 KGQWVIDSGCSFHLCPEKTLFYKYEAVDGGRVLMGNNNVCNIVGI 333


>emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera]
          Length = 699

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
 Frame = +2

Query: 200 DESDYS--LAVASAYSSCSGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRI 373
           DE  Y   L V+   S    +WILDSGC+FH+CP+R +FS  E  S GIVLMGN+ SC+I
Sbjct: 89  DEYGYGEHLVVSDGDSKPYKDWILDSGCTFHMCPNRDWFSTNETXSKGIVLMGNNVSCKI 148

Query: 374 EGIGTVRIK 400
            GIGTVRIK
Sbjct: 149 TGIGTVRIK 157


>emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera]
          Length = 437

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
 Frame = +2

Query: 74  KDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYSLAVASAYSSC-- 247
           K +C  C ++GH+ KDCP                 N  K+  +E D ++ +   Y S   
Sbjct: 61  KFKCFICHKEGHFNKDCP-------------NRRQNTVKKIVNEGD-AVVILDGYDSAEL 106

Query: 248 -------SG-EWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
                  SG EWILDSGCSFH+CP +++F  F++   G VL+GN+  C+I G GTVRIK
Sbjct: 107 LNMTEVDSGKEWILDSGCSFHMCPIKAWFENFKEADGGHVLLGNNKHCKILGTGTVRIK 165


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 40/106 (37%), Positives = 62/106 (58%)
 Frame = +2

Query: 83  CRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYSLAVASAYSSCSGEWI 262
           C +C ++GH+ K+CP                  VA  +G ES   L++++     S EWI
Sbjct: 227 CYYCKKEGHFRKECPERKKKNNGKYNDESDIAVVA--DGYESAEVLSIST--KKHSEEWI 282

Query: 263 LDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
           LDSGCSFH+ P+  +FS ++++  G VLMGN+  C + GIGT+++K
Sbjct: 283 LDSGCSFHMTPNLEWFSSYKEIDGGKVLMGNNMVCNVIGIGTIKLK 328


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 43/109 (39%), Positives = 63/109 (57%)
 Frame = +2

Query: 74  KDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYSLAVASAYSSCSG 253
           K +C  C ++GH+ KDCP +                +   +G ++   L VA   S    
Sbjct: 225 KFKCFICHKEGHFKKDCPDMRQNTXKKTMNEGDATMIL--DGYDNAGVLNVAEVDSG--K 280

Query: 254 EWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
           EWILDSGCSFH+CP +++F  F++ + G VL+GN+  C+I G GTV+IK
Sbjct: 281 EWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTGTVKIK 329


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
 Frame = +2

Query: 83  CRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEG-------DESDYSLAVASAYS 241
           C++C   GH I +C  L                  ++EG       ++SD  L VA  Y+
Sbjct: 145 CKYCKRDGHDISECWKLQDKDKRTRKYIPKGKK--EEEGKAAVVTDEKSDAELLVA--YA 200

Query: 242 SC---SGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
            C   S +WILD+ C++H+CP+R +F+ +E V  G VLMG+D  C + GIGTV+IK
Sbjct: 201 GCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIK 256


>gb|KHN07003.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 195

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = +2

Query: 74  KDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXX-VNVAKQEGDESDYSLAVASAYSSCS 250
           K +C HC ++GH  K CP                   + + +G ES  +L V+    +  
Sbjct: 85  KIKCYHCKKEGHTRKVCPERQKNGGSNNRKKDSGNAAIVQDDGYESVKALMVSE--KNPE 142

Query: 251 GEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
            +WI+DSGCS+H+ P+RS+F +F   + G+VL+G++  C+IEGIG++R K
Sbjct: 143 TKWIMDSGCSWHMTPNRSWFEQFSDQADGLVLLGDNKPCKIEGIGSIRFK 192


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 13/119 (10%)
 Frame = +2

Query: 83  CRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYSLAVAS---------- 232
           C++C   GH I DC  L               N   +   E     AVA+          
Sbjct: 178 CKYCKRGGHDISDCWKLQNKEKHKG-------NYKPKGKQEEQGKAAVATDNKPDAELLV 230

Query: 233 AYSSC---SGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
           AY+ C   S EW+LD+GC++H+CP+R +F+ +E V  G VLMG++  C++ G+GT++IK
Sbjct: 231 AYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIK 289


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
 Frame = +2

Query: 83  CRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEG-------DESDYSLAVASAYS 241
           C++C   GH I  C  L                  ++EG       ++SD  L VA  Y+
Sbjct: 236 CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKK--EEEGKAAVVTDEKSDAELLVA--YA 291

Query: 242 SC---SGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
            C   S +WILD+ C++H+CP+R +F+ +E V  G VLMG+D  C + GIGTV+IK
Sbjct: 292 GCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIK 347


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
 Frame = +2

Query: 83  CRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVN-----VAKQEGDESDYSLAVASAYSSC 247
           C++C   GH I  C  L                      A    ++SD  L VA  Y+ C
Sbjct: 53  CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVA--YAGC 110

Query: 248 ---SGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
              S +WILD+ C++H+CP+R +F+ +E V  G VLMG+D  C + GIGTV+IK
Sbjct: 111 AQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIK 164


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
 Frame = +2

Query: 83  CRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVN-----VAKQEGDESDYSLAVASAYSSC 247
           C++C   GH I  C  L                      A    ++SD  L VA  Y+ C
Sbjct: 221 CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVA--YAGC 278

Query: 248 ---SGEWILDSGCSFHICPDRSYFSKFEKVSSGIVLMGNDHSCRIEGIGTVRIK 400
              S +WILD+ C++H+CP+R +F+ +E V  G VLMG+D  C + GIGTV+IK
Sbjct: 279 AQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIK 332


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = +2

Query: 71  DKDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYSLAVASAYSSCS 250
           +K  C +C  K H I +C  +              V  A    D+S   L V +   +  
Sbjct: 228 NKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVVFAGCVAGH 287

Query: 251 GEWILDSGCSFHICPDRSYFSKFEKVSSG-IVLMGNDHSCRIEGIGTVRIK 400
            EWILDS CSFHIC  R++FS ++ V  G +V MG+D+ C I GIG+V+IK
Sbjct: 288 DEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIK 338


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = +2

Query: 71  DKDQCRHCLEKGHWIKDCPVLXXXXXXXXXXXXXXVNVAKQEGDESDYSLAVASAYSSCS 250
           +K  C +C  K H I +C  +              V  A    D+S   L V +   +  
Sbjct: 228 NKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVVFAGCVAGH 287

Query: 251 GEWILDSGCSFHICPDRSYFSKFEKVSSG-IVLMGNDHSCRIEGIGTVRIK 400
            EWILDS CSFHIC  R++FS ++ V  G +V MG+D+ C I GIG+V+IK
Sbjct: 288 DEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIK 338