BLASTX nr result

ID: Aconitum23_contig00034713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00034713
         (693 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010268770.1| PREDICTED: DNA repair protein RAD16-like iso...    70   1e-09
ref|XP_010268772.1| PREDICTED: DNA repair protein RAD16-like iso...    66   2e-08
ref|XP_010268771.1| PREDICTED: DNA repair protein RAD16-like iso...    59   3e-06

>ref|XP_010268770.1| PREDICTED: DNA repair protein RAD16-like isoform X1 [Nelumbo
           nucifera]
          Length = 1317

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 72/230 (31%), Positives = 108/230 (46%), Gaps = 2/230 (0%)
 Frame = -3

Query: 685 MDWDELNGILSEDSN-PCG-NQNLPEDLSSNNSWHGGVVPTQVTHCNQPELQTGIRESES 512
           +D D+L  IL    N P G ++    ++SS N   G        H N  + Q GI     
Sbjct: 26  IDLDQLYAILDGSPNQPHGISETNAGNISSRNDLQGESSFLAYHHENVSQPQNGIYGV-- 83

Query: 511 VPRRDDVIRESSEWSCSENMVPADSRERMEAGQIFGYAETSGMIFDHRKVDPVSHINSPL 332
            P +   +  S  +  S+    +DSR  M +   F    +S M+ DH K++    I +P+
Sbjct: 84  APPKGAEVPGSFMFYPSDYTQFSDSRTSMGSECSFETPGSSQMVSDHVKMEDPPQIGNPV 143

Query: 331 GTCSLSPTDWSTMSCIEHDTCSSRERDGGAMIPSYDCDRGASHLTAMEEPGFAFGSPSAM 152
            + SLS  D  T+   E +TC   +R G ++ P      GAS    MEE G AFG  SA+
Sbjct: 144 CS-SLSFNDQLTVPFSECNTCLD-QRVGSSVNPP-----GASPYMVMEEAGLAFGKYSAI 196

Query: 151 YVNSMEDPGGLEGNFHTSNAEIFFMDVESSLPYSYPTEIDGSQVSSMHCE 2
             NSM++ G LE N      E +F+DV+      + T ++ SQV+ + CE
Sbjct: 197 CGNSMDNMGKLEENSCKYPEEAYFLDVDIG---QFHTILNSSQVADITCE 243


>ref|XP_010268772.1| PREDICTED: DNA repair protein RAD16-like isoform X3 [Nelumbo
           nucifera]
          Length = 1222

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 52/148 (35%), Positives = 77/148 (52%)
 Frame = -3

Query: 445 ADSRERMEAGQIFGYAETSGMIFDHRKVDPVSHINSPLGTCSLSPTDWSTMSCIEHDTCS 266
           +DSR  M +   F    +S M+ DH K++    I +P+ + SLS  D  T+   E +TC 
Sbjct: 11  SDSRTSMGSECSFETPGSSQMVSDHVKMEDPPQIGNPVCS-SLSFNDQLTVPFSECNTCL 69

Query: 265 SRERDGGAMIPSYDCDRGASHLTAMEEPGFAFGSPSAMYVNSMEDPGGLEGNFHTSNAEI 86
             +R G ++ P      GAS    MEE G AFG  SA+  NSM++ G LE N      E 
Sbjct: 70  D-QRVGSSVNPP-----GASPYMVMEEAGLAFGKYSAICGNSMDNMGKLEENSCKYPEEA 123

Query: 85  FFMDVESSLPYSYPTEIDGSQVSSMHCE 2
           +F+DV+      + T ++ SQV+ + CE
Sbjct: 124 YFLDVDIG---QFHTILNSSQVADITCE 148


>ref|XP_010268771.1| PREDICTED: DNA repair protein RAD16-like isoform X2 [Nelumbo
           nucifera]
          Length = 1273

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 2/201 (0%)
 Frame = -3

Query: 685 MDWDELNGILSEDSN-PCG-NQNLPEDLSSNNSWHGGVVPTQVTHCNQPELQTGIRESES 512
           +D D+L  IL    N P G ++    ++SS N   G        H N  + Q GI     
Sbjct: 26  IDLDQLYAILDGSPNQPHGISETNAGNISSRNDLQGESSFLAYHHENVSQPQNGIYGV-- 83

Query: 511 VPRRDDVIRESSEWSCSENMVPADSRERMEAGQIFGYAETSGMIFDHRKVDPVSHINSPL 332
            P +   +  S  +  S+    +DSR  M +   F    +S M+ DH K++    I +P+
Sbjct: 84  APPKGAEVPGSFMFYPSDYTQFSDSRTSMGSECSFETPGSSQMVSDHVKMEDPPQIGNPV 143

Query: 331 GTCSLSPTDWSTMSCIEHDTCSSRERDGGAMIPSYDCDRGASHLTAMEEPGFAFGSPSAM 152
            + SLS  D  T+   E +TC   +R G ++ P      GAS    MEE G AFG  SA+
Sbjct: 144 CS-SLSFNDQLTVPFSECNTCLD-QRVGSSVNPP-----GASPYMVMEEAGLAFGKYSAI 196

Query: 151 YVNSMEDPGGLEGNFHTSNAE 89
             NSM++ G LE N + S ++
Sbjct: 197 CGNSMDNMGKLEENSYPSASD 217


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