BLASTX nr result
ID: Aconitum23_contig00033408
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00033408
(401 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP01670.1| unnamed protein product [Coffea canephora] 70 5e-10
ref|XP_013614629.1| PREDICTED: 60S ribosomal export protein NMD3... 68 2e-09
ref|XP_013591958.1| PREDICTED: 60S ribosomal export protein NMD3... 68 2e-09
gb|KMZ76373.1| Nonsense-mediated mRNA decay NMD3 family protein ... 68 2e-09
ref|XP_009779349.1| PREDICTED: 60S ribosomal export protein NMD3... 68 3e-09
ref|XP_008440695.1| PREDICTED: 60S ribosomal export protein NMD3... 68 3e-09
ref|XP_004296646.1| PREDICTED: 60S ribosomal export protein NMD3... 68 3e-09
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3... 68 3e-09
ref|XP_010514150.1| PREDICTED: 60S ribosomal export protein NMD3... 67 4e-09
ref|XP_010502402.1| PREDICTED: 60S ribosomal export protein NMD3... 67 4e-09
gb|KDO63152.1| hypothetical protein CISIN_1g010400mg [Citrus sin... 67 4e-09
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3... 67 4e-09
ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3... 67 4e-09
ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citr... 67 4e-09
ref|XP_006302108.1| hypothetical protein CARUB_v10020105mg, part... 67 4e-09
ref|XP_006290919.1| hypothetical protein CARUB_v10017033mg [Caps... 67 4e-09
ref|XP_002876899.1| nonsense-mediated mRNA decay NMD3 family pro... 67 4e-09
dbj|BAH57009.1| AT2G03820 [Arabidopsis thaliana] 67 4e-09
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] 67 4e-09
gb|AAL07089.1| putative nonsense-mediated mRNA decay protein [Ar... 67 4e-09
>emb|CDP01670.1| unnamed protein product [Coffea canephora]
Length = 578
Score = 70.5 bits (171), Expect = 5e-10
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Frame = -2
Query: 325 DITEGLD--LSLTQCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL + + CP+C YL+P TWI+ Q SK+ FC++RLK L + +++ EF+
Sbjct: 110 DITEGLQKHVVIVHCPECDSYLQPPRTWIKAQLESKELLTFCVKRLKNLNKVRLVHAEFI 169
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKEFSDRLAIQTEQI 5
TE PH+ + VKLTV KE +R ++ +
Sbjct: 170 WTE-------------------PHSKRIKVKLTVQKEVLNRAILEQSYV 199
>ref|XP_013614629.1| PREDICTED: 60S ribosomal export protein NMD3-like [Brassica
oleracea var. oleracea]
Length = 518
Score = 68.2 bits (165), Expect = 2e-09
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = -2
Query: 328 YDITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEF 155
+DITEGL S+ CP+C YL+P TWI+ Q+ S+D FC++RLK L + + N EF
Sbjct: 47 FDITEGLQKSIQIFYCPECGCYLQPPKTWIKAQWESRDLLSFCIKRLKNLNKVRLKNAEF 106
Query: 154 VGTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
V TE PH+ + VKLTV E
Sbjct: 107 VWTE-------------------PHSKRIKVKLTVQAE 125
>ref|XP_013591958.1| PREDICTED: 60S ribosomal export protein NMD3-like [Brassica
oleracea var. oleracea]
Length = 518
Score = 68.2 bits (165), Expect = 2e-09
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = -2
Query: 328 YDITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEF 155
+DITEGL S+ CP+C YL+P TWI+ Q+ S+D FC++RLK L + + N EF
Sbjct: 47 FDITEGLQKSIQIFYCPECGCYLQPPKTWIKAQWESRDLLSFCIKRLKNLNKVRLKNAEF 106
Query: 154 VGTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
V TE PH+ + VKLTV E
Sbjct: 107 VWTE-------------------PHSKRIKVKLTVQAE 125
>gb|KMZ76373.1| Nonsense-mediated mRNA decay NMD3 family protein [Zostera marina]
Length = 501
Score = 68.2 bits (165), Expect = 2e-09
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL +LT CP+C YL+P TWI+ + SK+ FC++RLK + + +++ EFV
Sbjct: 42 DITEGLQKNLTILHCPECNTYLQPPSTWIKAELESKELLAFCIKRLKNMNTVKLVHAEFV 101
Query: 151 GTEPNAE 131
TEP+++
Sbjct: 102 WTEPHSK 108
>ref|XP_009779349.1| PREDICTED: 60S ribosomal export protein NMD3-like [Nicotiana
sylvestris]
Length = 511
Score = 67.8 bits (164), Expect = 3e-09
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLD--LSLTQCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL + + CP+C YL+P +WI+ Q SK+ FC++RLK L + ++N EF+
Sbjct: 43 DITEGLQKHVVIIHCPECDSYLQPPRSWIKAQLESKELLTFCIKRLKNLNKVKLMNAEFI 102
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ +NV+L V KE
Sbjct: 103 WTE-------------------PHSKRINVRLRVQKE 120
>ref|XP_008440695.1| PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo]
Length = 505
Score = 67.8 bits (164), Expect = 3e-09
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL LT CP C+ YL+P TWI+ Q SK+ FC++RL+ L + +++ EFV
Sbjct: 43 DITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFV 102
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKL V KE
Sbjct: 103 WTE-------------------PHSKRIKVKLKVQKE 120
>ref|XP_004296646.1| PREDICTED: 60S ribosomal export protein NMD3-like [Fragaria vesca
subsp. vesca] gi|764570160|ref|XP_011462518.1|
PREDICTED: 60S ribosomal export protein NMD3-like
[Fragaria vesca subsp. vesca]
Length = 511
Score = 67.8 bits (164), Expect = 3e-09
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL +T CP+C+ YL+P TWI+ Q SK+ FC+RR+K L + +++ EF+
Sbjct: 44 DITEGLQKQVTILHCPECETYLQPPRTWIKAQLESKELLSFCIRRVKNLNKVKLVHAEFI 103
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKL V KE
Sbjct: 104 WTE-------------------PHSKRIKVKLKVQKE 121
>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3 [Cucumis sativus]
gi|700193614|gb|KGN48818.1| hypothetical protein
Csa_6G502070 [Cucumis sativus]
Length = 505
Score = 67.8 bits (164), Expect = 3e-09
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL LT CP C+ YL+P TWI+ Q SK+ FC++RL+ L + +++ EFV
Sbjct: 43 DITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFV 102
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKL V KE
Sbjct: 103 WTE-------------------PHSKRIKVKLKVQKE 120
>ref|XP_010514150.1| PREDICTED: 60S ribosomal export protein NMD3-like [Camelina sativa]
Length = 518
Score = 67.4 bits (163), Expect = 4e-09
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL S+ CP+C YL+P TWI+ Q+ SK+ FC++RLK L + + N EFV
Sbjct: 45 DITEGLQKSIQIFYCPECTCYLQPPKTWIKAQWESKELLTFCIKRLKNLNKVKLKNAEFV 104
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKLTV E
Sbjct: 105 WTE-------------------PHSKRIKVKLTVQAE 122
>ref|XP_010502402.1| PREDICTED: 60S ribosomal export protein NMD3-like [Camelina sativa]
Length = 515
Score = 67.4 bits (163), Expect = 4e-09
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL S+ CP+C YL+P TWI+ Q+ SK+ FC++RLK L + + N EFV
Sbjct: 45 DITEGLQKSIQIFYCPECTCYLQPPKTWIKAQWESKELLTFCIKRLKNLNKVKLKNAEFV 104
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKLTV E
Sbjct: 105 WTE-------------------PHSKRIKVKLTVQAE 122
>gb|KDO63152.1| hypothetical protein CISIN_1g010400mg [Citrus sinensis]
Length = 511
Score = 67.4 bits (163), Expect = 4e-09
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLD--LSLTQCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL + ++ CP+C YL+P TWI+ Q SK+ FC++RLK L + ++N EF+
Sbjct: 43 DITEGLQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFI 102
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKL V KE
Sbjct: 103 WTE-------------------PHSKRIKVKLKVQKE 120
>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3 [Vitis vinifera]
Length = 510
Score = 67.4 bits (163), Expect = 4e-09
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLD--LSLTQCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL +++ CP+C YL+P TWI+ Q SK+ FC++RLK L + +++ EF+
Sbjct: 43 DITEGLQKHVTIVHCPECDTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFI 102
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKL V KE
Sbjct: 103 WTE-------------------PHSKRIKVKLRVQKE 120
>ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3-like, partial [Citrus
sinensis]
Length = 523
Score = 67.4 bits (163), Expect = 4e-09
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLD--LSLTQCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL + ++ CP+C YL+P TWI+ Q SK+ FC++RLK L + ++N EF+
Sbjct: 56 DITEGLQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFI 115
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKL V KE
Sbjct: 116 WTE-------------------PHSKRIKVKLKVQKE 133
>ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citrus clementina]
gi|557532730|gb|ESR43913.1| hypothetical protein
CICLE_v10011515mg [Citrus clementina]
Length = 511
Score = 67.4 bits (163), Expect = 4e-09
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLD--LSLTQCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL + ++ CP+C YL+P TWI+ Q SK+ FC++RLK L + ++N EF+
Sbjct: 43 DITEGLQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFI 102
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKL V KE
Sbjct: 103 WTE-------------------PHSKRIKVKLKVQKE 120
>ref|XP_006302108.1| hypothetical protein CARUB_v10020105mg, partial [Capsella rubella]
gi|482570818|gb|EOA35006.1| hypothetical protein
CARUB_v10020105mg, partial [Capsella rubella]
Length = 542
Score = 67.4 bits (163), Expect = 4e-09
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL S+ CP+C YL+P TWI+ Q+ SK+ FC++RLK L + + N EFV
Sbjct: 69 DITEGLQKSIQIFYCPECSCYLQPPKTWIKAQWESKELLTFCVKRLKNLNKVKLKNAEFV 128
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKLTV E
Sbjct: 129 WTE-------------------PHSKRIKVKLTVQAE 146
>ref|XP_006290919.1| hypothetical protein CARUB_v10017033mg [Capsella rubella]
gi|482559626|gb|EOA23817.1| hypothetical protein
CARUB_v10017033mg [Capsella rubella]
Length = 515
Score = 67.4 bits (163), Expect = 4e-09
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL S+ CP+C YL+P TWI+ Q+ SK+ FC++RLK L + + N EFV
Sbjct: 45 DITEGLQKSIQIFYCPECTCYLQPPKTWIKAQWESKELLTFCIKRLKNLNKVKLKNAEFV 104
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKLTV E
Sbjct: 105 WTE-------------------PHSKRIKVKLTVQAE 122
>ref|XP_002876899.1| nonsense-mediated mRNA decay NMD3 family protein [Arabidopsis
lyrata subsp. lyrata] gi|297322737|gb|EFH53158.1|
nonsense-mediated mRNA decay NMD3 family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 516
Score = 67.4 bits (163), Expect = 4e-09
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL S+ CP+C YL+P TWI+ Q+ SK+ FC++RLK L + + N EFV
Sbjct: 45 DITEGLQKSIQIFYCPECTCYLQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFV 104
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKLTV E
Sbjct: 105 WTE-------------------PHSKRIKVKLTVQAE 122
>dbj|BAH57009.1| AT2G03820 [Arabidopsis thaliana]
Length = 392
Score = 67.4 bits (163), Expect = 4e-09
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL S+ CP+C YL+P TWI+ Q+ SK+ FC++RLK L + + N EFV
Sbjct: 45 DITEGLQKSIQIFYCPECTCYLQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFV 104
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKLTV E
Sbjct: 105 WTE-------------------PHSKRIKVKLTVQAE 122
>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
Length = 594
Score = 67.4 bits (163), Expect = 4e-09
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLD--LSLTQCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL +++ CP+C YL+P TWI+ Q SK+ FC++RLK L + +++ EF+
Sbjct: 43 DITEGLQKHVTIVHCPECDTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFI 102
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKL V KE
Sbjct: 103 WTE-------------------PHSKRIKVKLRVQKE 120
>gb|AAL07089.1| putative nonsense-mediated mRNA decay protein [Arabidopsis
thaliana]
Length = 516
Score = 67.4 bits (163), Expect = 4e-09
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = -2
Query: 325 DITEGLDLSLT--QCPKCKRYLEPRGTWIELQFGSKDFQIFCLRRLKTLKNLIVLNVEFV 152
DITEGL S+ CP+C YL+P TWI+ Q+ SK+ FC++RLK L + + N EFV
Sbjct: 45 DITEGLQKSIQIFYCPECTCYLQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFV 104
Query: 151 GTEPNAEFAGTESNAKSVGTVVPHAMSVNVKLTVLKE 41
TE PH+ + VKLTV E
Sbjct: 105 WTE-------------------PHSKRIKVKLTVQAE 122