BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00033134
         (386 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007023626.1| Uncharacterized protein TCM_046829 [Theobrom...   125   7e-46
ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobrom...   124   2e-45
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The...   124   3e-45
ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [The...   124   3e-45
ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobrom...   125   6e-45
ref|XP_007037024.1| Uncharacterized protein TCM_013224 [Theobrom...   122   1e-44
ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobrom...   122   7e-44
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The...   117   5e-43
ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, par...   105   1e-39
emb|CAN74420.1| hypothetical protein VITISV_024222 [Vitis vinifera]   109   2e-35
gb|AAP43919.1| integrase [Gossypium hirsutum]                         115   1e-34
ref|XP_007221295.1| hypothetical protein PRUPE_ppa024499mg, part...   110   7e-34
ref|XP_009151506.1| PREDICTED: serine/threonine-protein kinase T...   103   7e-34
ref|XP_013704486.1| PREDICTED: uncharacterized protein LOC106408...   107   9e-34
ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, part...   108   9e-34
ref|XP_008650350.1| PREDICTED: uncharacterized protein LOC103631...   112   1e-33
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni...   113   1e-33
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   113   1e-33
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   115   2e-33
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         113   2e-33

>ref|XP_007023626.1| Uncharacterized protein TCM_046829 [Theobroma cacao]
           gi|508778992|gb|EOY26248.1| Uncharacterized protein
           TCM_046829 [Theobroma cacao]
          Length = 672

 Score =  125 bits (315), Expect(2) = 7e-46
 Identities = 55/68 (80%), Positives = 62/68 (91%)
 Frame = +2

Query: 182 RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
           RF KM HFIPC + +DA+HIA+LFF+E+VRLHG+P SIVSDRDVKFMGHFWRTLWRK GT
Sbjct: 386 RFSKMAHFIPCFRTSDATHIAELFFREIVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGT 445

Query: 362 ELKYSSTC 385
           ELKYSSTC
Sbjct: 446 ELKYSSTC 453



 Score = 85.1 bits (209), Expect(2) = 7e-46
 Identities = 38/58 (65%), Positives = 46/58 (79%)
 Frame = +3

Query: 6   MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           M + V+++VKRC  C FGK S+QNT LY+ L  P A W+HLSMDFVLGLPKTAKGFD+
Sbjct: 322 MRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDS 379


>ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobroma cacao]
            gi|508727408|gb|EOY19305.1| Uncharacterized protein
            TCM_044370 [Theobroma cacao]
          Length = 1306

 Score =  124 bits (311), Expect(2) = 2e-45
 Identities = 56/68 (82%), Positives = 61/68 (89%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KM HFIPC + +DA+HIA+LFF EVVRLHG+P SIVSDRDVKFMGHFWRTLWRK GT
Sbjct: 1011 RFSKMAHFIPCFRTSDATHIAELFFCEVVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGT 1070

Query: 362  ELKYSSTC 385
            ELKYSSTC
Sbjct: 1071 ELKYSSTC 1078



 Score = 85.1 bits (209), Expect(2) = 2e-45
 Identities = 38/58 (65%), Positives = 46/58 (79%)
 Frame = +3

Query: 6    MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
            M + V+++VKRC  C FGK S+QNT LY+ L  P A W+HLSMDFVLGLPKTAKGFD+
Sbjct: 947  MRRDVERLVKRCPTCLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDS 1004


>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 786

 Score =  124 bits (310), Expect(2) = 3e-45
 Identities = 54/68 (79%), Positives = 62/68 (91%)
 Frame = +2

Query: 182 RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
           RF KM HFIPC + ++A+HIA+LFF+E+VRLHG+P SIVSDRDVKFMGHFWRTLWRK GT
Sbjct: 567 RFSKMAHFIPCFRTSNATHIAELFFREIVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGT 626

Query: 362 ELKYSSTC 385
           ELKYSSTC
Sbjct: 627 ELKYSSTC 634



 Score = 85.1 bits (209), Expect(2) = 3e-45
 Identities = 38/58 (65%), Positives = 46/58 (79%)
 Frame = +3

Query: 6   MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           M + V+++VKRC  C FGK S+QNT LY+ L  P A W+HLSMDFVLGLPKTAKGFD+
Sbjct: 503 MRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDS 560


>ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508700944|gb|EOX92840.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 647

 Score =  124 bits (312), Expect(2) = 3e-45
 Identities = 56/69 (81%), Positives = 62/69 (89%)
 Frame = +2

Query: 179 HRF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMG 358
           ++F KM HFIPC K +DA+HIA+LFF EVVRLHG+P SIVSDRDVKFMGHFWRTLWRK G
Sbjct: 382 YQFSKMAHFIPCFKTSDATHIAELFFCEVVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFG 441

Query: 359 TELKYSSTC 385
           TELKYSSTC
Sbjct: 442 TELKYSSTC 450



 Score = 84.3 bits (207), Expect(2) = 3e-45
 Identities = 37/58 (63%), Positives = 46/58 (79%)
 Frame = +3

Query: 6   MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           M++ V+++VKRC  C FGK S+QNT LY+ L  P A W+HLSMDFVLGLPK AKGFD+
Sbjct: 319 MHRDVERLVKRCSTCLFGKGSAQNTGLYVPLLEPDAPWIHLSMDFVLGLPKIAKGFDS 376


>ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobroma cacao]
           gi|508724940|gb|EOY16837.1| Uncharacterized protein
           TCM_035725 [Theobroma cacao]
          Length = 499

 Score =  125 bits (315), Expect(2) = 6e-45
 Identities = 55/68 (80%), Positives = 62/68 (91%)
 Frame = +2

Query: 182 RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
           RF KM HFIPC + +DA+HIA+LFF+E+VRLHG+P SIVSDRDVKFMGHFWRTLWRK GT
Sbjct: 162 RFSKMAHFIPCFRTSDATHIAELFFREIVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGT 221

Query: 362 ELKYSSTC 385
           ELKYSSTC
Sbjct: 222 ELKYSSTC 229



 Score = 82.0 bits (201), Expect(2) = 6e-45
 Identities = 37/58 (63%), Positives = 45/58 (77%)
 Frame = +3

Query: 6   MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           M + V+++VKRC  C FGK S+QNT LY+ L  P A W+HLSMDFVL LPKTAKGFD+
Sbjct: 98  MRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLELPKTAKGFDS 155


>ref|XP_007037024.1| Uncharacterized protein TCM_013224 [Theobroma cacao]
           gi|508774269|gb|EOY21525.1| Uncharacterized protein
           TCM_013224 [Theobroma cacao]
          Length = 412

 Score =  122 bits (305), Expect(2) = 1e-44
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = +2

Query: 182 RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
           RF KM HFIPC +  DA+HIA+LFF+EVVRLHG+P SIVS+RDVKFMGHFW+TLWRK GT
Sbjct: 75  RFSKMAHFIPCFRTFDATHIAELFFREVVRLHGIPTSIVSNRDVKFMGHFWKTLWRKFGT 134

Query: 362 ELKYSSTC 385
           ELKYSSTC
Sbjct: 135 ELKYSSTC 142



 Score = 85.1 bits (209), Expect(2) = 1e-44
 Identities = 38/58 (65%), Positives = 46/58 (79%)
 Frame = +3

Query: 6   MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           M + V+++VKRC  C FGK S+QNT LY+ L  P A W+HLSMDFVLGLPKTAKGFD+
Sbjct: 11  MRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDS 68


>ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobroma cacao]
            gi|508724802|gb|EOY16699.1| Uncharacterized protein
            TCM_035549 [Theobroma cacao]
          Length = 1392

 Score =  122 bits (307), Expect(2) = 7e-44
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KM HFIPC + +DA+HIA+LFF+E+VRLH +P SIVSDRDVKFMGHFWRTLWRK GT
Sbjct: 1055 RFSKMAHFIPCFRTSDATHIAELFFREIVRLHRIPTSIVSDRDVKFMGHFWRTLWRKFGT 1114

Query: 362  ELKYSSTC 385
            ELKYSSTC
Sbjct: 1115 ELKYSSTC 1122



 Score = 81.6 bits (200), Expect(2) = 7e-44
 Identities = 37/58 (63%), Positives = 45/58 (77%)
 Frame = +3

Query: 6    MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
            M + V+++VKRC  C FGK S+QNT LY+ L  P A W+HLSMDFVLGLPKTAK FD+
Sbjct: 991  MRQDVERLVKRCPTCLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKRFDS 1048


>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1452

 Score =  117 bits (294), Expect(2) = 5e-43
 Identities = 52/68 (76%), Positives = 60/68 (88%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KM HFIPC + +DA+HIA+LFF+E+V LHG+P SIVSDR VKFMG+FWRTLWRK GT
Sbjct: 1115 RFSKMAHFIPCFRTSDATHIAELFFREIVILHGIPTSIVSDRHVKFMGYFWRTLWRKFGT 1174

Query: 362  ELKYSSTC 385
            ELKYSSTC
Sbjct: 1175 ELKYSSTC 1182



 Score = 83.6 bits (205), Expect(2) = 5e-43
 Identities = 37/58 (63%), Positives = 45/58 (77%)
 Frame = +3

Query: 6    MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
            M + V+++VKRC  C FGK S+QNT LY+ L  P A W+HLSMDFVLGLPKT KGFD+
Sbjct: 1051 MRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTTKGFDS 1108


>ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
           gi|508702149|gb|EOX94045.1| DNA/RNA polymerases
           superfamily protein, partial [Theobroma cacao]
          Length = 624

 Score =  105 bits (261), Expect(2) = 1e-39
 Identities = 45/57 (78%), Positives = 52/57 (91%)
 Frame = +2

Query: 182 RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRK 352
           RF KM HFIPC + +DA+HIA+LFF+E+VRLHG+P SIVSDRDVKFMGHFWRTLWRK
Sbjct: 567 RFSKMAHFIPCFRTSDATHIAELFFREIVRLHGIPTSIVSDRDVKFMGHFWRTLWRK 623



 Score = 85.1 bits (209), Expect(2) = 1e-39
 Identities = 38/58 (65%), Positives = 46/58 (79%)
 Frame = +3

Query: 6   MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           M + V+++VKRC  C FGK S+QNT LY+ L  P A W+HLSMDFVLGLPKTAKGFD+
Sbjct: 503 MRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDS 560


>emb|CAN74420.1| hypothetical protein VITISV_024222 [Vitis vinifera]
          Length = 549

 Score =  109 bits (273), Expect(2) = 2e-35
 Identities = 50/67 (74%), Positives = 60/67 (89%)
 Frame = +2

Query: 182 RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
           RF KM HFIP  KA+DAS++A LFFKEVVRLHGLP+SIVSDRDVKFM +FW+TLW K+GT
Sbjct: 415 RFSKMTHFIPRKKASDASYVAALFFKEVVRLHGLPQSIVSDRDVKFMSYFWKTLWAKLGT 474

Query: 362 ELKYSST 382
           +LK+SS+
Sbjct: 475 QLKFSSS 481



 Score = 66.6 bits (161), Expect(2) = 2e-35
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = +3

Query: 12  KYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           K V K++K+C+ CQ GK S QNT LY  L  P   W  LSMDFVLGLP T  GF++
Sbjct: 353 KDVWKVIKQCRACQVGKGSKQNTGLYTPLPIPSKPWEDLSMDFVLGLPMTQWGFNS 408


>gb|AAP43919.1| integrase [Gossypium hirsutum]
          Length = 334

 Score =  115 bits (288), Expect(2) = 1e-34
 Identities = 50/68 (73%), Positives = 59/68 (86%)
 Frame = +2

Query: 182 RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
           RF KM HFIPC K  DA+H+ADLFFKEVVRLHG+PK+IVSDRDVKF+ HFW+ LW K+GT
Sbjct: 261 RFSKMSHFIPCHKTDDATHVADLFFKEVVRLHGIPKTIVSDRDVKFLSHFWKVLWGKLGT 320

Query: 362 ELKYSSTC 385
           +L YS+TC
Sbjct: 321 KLLYSTTC 328



 Score = 58.2 bits (139), Expect(2) = 1e-34
 Identities = 27/59 (45%), Positives = 35/59 (59%)
 Frame = +3

Query: 3   HMYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           HM K V+K+  +C  C+  K       LY  L  P + WV LSMDF+LGLP+T KG D+
Sbjct: 196 HMKKDVEKVCSKCITCKQAKSKVMLHGLYTPLPIPTSPWVDLSMDFILGLPRTKKGRDS 254


>ref|XP_007221295.1| hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
            gi|462417929|gb|EMJ22494.1| hypothetical protein
            PRUPE_ppa024499mg, partial [Prunus persica]
          Length = 1364

 Score =  110 bits (274), Expect(2) = 7e-34
 Identities = 49/66 (74%), Positives = 58/66 (87%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KM HF+PCSKAADAS++A LFFKEV+RLHGLP SIVSDRDVKF+ +FW+TLW+  GT
Sbjct: 1095 RFSKMAHFLPCSKAADASYVAKLFFKEVIRLHGLPVSIVSDRDVKFVSYFWKTLWKLFGT 1154

Query: 362  ELKYSS 379
             LK+SS
Sbjct: 1155 SLKFSS 1160



 Score = 60.8 bits (146), Expect(2) = 7e-34
 Identities = 29/54 (53%), Positives = 33/54 (61%)
 Frame = +3

Query: 18   VQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
            V  I+ +C  CQ  K   QNT LY  L  P   W  LSMDFVLGLPKTA+G D+
Sbjct: 1035 VAHILAQCCTCQLAKARKQNTGLYTPLPIPHTPWKDLSMDFVLGLPKTARGHDS 1088


>ref|XP_009151506.1| PREDICTED: serine/threonine-protein kinase TIO-like, partial
            [Brassica rapa]
          Length = 1091

 Score =  103 bits (258), Expect(2) = 7e-34
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KM HFI C K ADAS+IA LFF+EVVRLHG+PK+I+SDRD KF+ HFW TLWR  GT
Sbjct: 814  RFSKMSHFIACKKTADASNIAKLFFREVVRLHGVPKTIISDRDTKFLSHFWITLWRMFGT 873

Query: 362  ELKYSST 382
             LK SST
Sbjct: 874  SLKRSST 880



 Score = 67.0 bits (162), Expect(2) = 7e-34
 Identities = 32/59 (54%), Positives = 38/59 (64%)
 Frame = +3

Query: 3   HMYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           H+ +    IVKRC  CQ  K  SQNT LYM L  P+  W  LSMDFVLGLP+T +G D+
Sbjct: 749 HLRRDAGAIVKRCYICQVSKGQSQNTGLYMPLPIPEDIWQDLSMDFVLGLPRTQRGVDS 807


>ref|XP_013704486.1| PREDICTED: uncharacterized protein LOC106408221 [Brassica napus]
          Length = 1320

 Score =  107 bits (267), Expect(2) = 9e-34
 Identities = 46/68 (67%), Positives = 58/68 (85%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KM HFIPC K  DAS +ADLFF+EVVRLHG+P++IVSDRD KF+ +FW+TLW K+GT
Sbjct: 958  RFSKMAHFIPCHKTDDASLVADLFFREVVRLHGMPRTIVSDRDTKFLSYFWKTLWGKLGT 1017

Query: 362  ELKYSSTC 385
            +L +S+TC
Sbjct: 1018 KLLFSTTC 1025



 Score = 63.2 bits (152), Expect(2) = 9e-34
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +3

Query: 6    MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
            +YK V+++  RC  C+  K   Q T LY  L  P A W+ +SMDFVLGLP+T KG D+
Sbjct: 894  LYKEVERVCSRCVVCKQAKSKVQPTGLYTPLPIPTAPWIDISMDFVLGLPRTRKGRDS 951


>ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, partial [Prunus persica]
           gi|462418685|gb|EMJ22948.1| hypothetical protein
           PRUPE_ppb022800mg, partial [Prunus persica]
          Length = 722

 Score =  108 bits (269), Expect(2) = 9e-34
 Identities = 48/66 (72%), Positives = 57/66 (86%)
 Frame = +2

Query: 182 RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
           RF KM HF+PCSKAADAS++A LFFKEV+ LHGLP SIVSDRDVKF+ +FW+TLW+  GT
Sbjct: 368 RFSKMAHFLPCSKAADASYVAKLFFKEVIHLHGLPVSIVSDRDVKFVSYFWKTLWKLFGT 427

Query: 362 ELKYSS 379
            LK+SS
Sbjct: 428 SLKFSS 433



 Score = 62.4 bits (150), Expect(2) = 9e-34
 Identities = 29/54 (53%), Positives = 34/54 (62%)
 Frame = +3

Query: 18  VQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           V  I+ +C+ CQ  K   QNT LY  L  P   W  LSMDFVLGLPKTA+G D+
Sbjct: 308 VAHILAQCRTCQLAKARKQNTGLYTPLPIPHTPWKDLSMDFVLGLPKTARGHDS 361


>ref|XP_008650350.1| PREDICTED: uncharacterized protein LOC103631140 [Zea mays]
          Length = 1175

 Score =  112 bits (279), Expect(2) = 1e-33
 Identities = 47/68 (69%), Positives = 58/68 (85%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KM HFIPC K  DA+H+ADLFF+EVVRLHG+P +IVSDRD KF+ HFW+TLW K+GT
Sbjct: 867  RFSKMAHFIPCHKTDDATHVADLFFREVVRLHGVPNTIVSDRDTKFLSHFWKTLWAKLGT 926

Query: 362  ELKYSSTC 385
            +L +S+TC
Sbjct: 927  KLLFSTTC 934



 Score = 58.2 bits (139), Expect(2) = 1e-33
 Identities = 28/58 (48%), Positives = 34/58 (58%)
 Frame = +3

Query: 6   MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           M + V++ V RC  CQ  K       LYM L  P A W  +SMDFVLGLP+T KG D+
Sbjct: 803 MRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSAPWEDISMDFVLGLPRTKKGRDS 860


>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  113 bits (282), Expect(2) = 1e-33
 Identities = 47/68 (69%), Positives = 59/68 (86%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KM HFIPC K+ DA+H+ADLFF+E+VRLHG+P +IVSDRD KF+ HFWRTLW K+GT
Sbjct: 1215 RFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGT 1274

Query: 362  ELKYSSTC 385
            +L +S+TC
Sbjct: 1275 KLLFSTTC 1282



 Score = 56.6 bits (135), Expect(2) = 1e-33
 Identities = 27/58 (46%), Positives = 33/58 (56%)
 Frame = +3

Query: 6    MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
            M + V++ V RC  CQ  K       LYM L  P   W  +SMDFVLGLP+T KG D+
Sbjct: 1151 MRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDS 1208


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 889

 Score =  113 bits (282), Expect(2) = 1e-33
 Identities = 47/68 (69%), Positives = 59/68 (86%)
 Frame = +2

Query: 182 RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
           RF KM HFIPC K+ DA+H+ADLFF+E+VRLHG+P +IVSDRD KF+ HFWRTLW K+GT
Sbjct: 632 RFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGT 691

Query: 362 ELKYSSTC 385
           +L +S+TC
Sbjct: 692 KLLFSTTC 699



 Score = 56.6 bits (135), Expect(2) = 1e-33
 Identities = 27/58 (46%), Positives = 33/58 (56%)
 Frame = +3

Query: 6   MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
           M + V++ V RC  CQ  K       LYM L  P   W  +SMDFVLGLP+T KG D+
Sbjct: 568 MRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDS 625


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  115 bits (289), Expect(2) = 2e-33
 Identities = 50/68 (73%), Positives = 59/68 (86%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KMVHFIPC K  DASHIADLFF+E+VRLHG+P +IVSDRD KF+ HFWRTLW K+GT
Sbjct: 1270 RFSKMVHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGT 1329

Query: 362  ELKYSSTC 385
            +L +S+TC
Sbjct: 1330 KLLFSTTC 1337



 Score = 53.5 bits (127), Expect(2) = 2e-33
 Identities = 26/58 (44%), Positives = 32/58 (55%)
 Frame = +3

Query: 6    MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
            M + V + V RC  CQ  K       LYM L  P   W  +SMDFVLGLP+T +G D+
Sbjct: 1206 MRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDS 1263


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  113 bits (282), Expect(2) = 2e-33
 Identities = 48/68 (70%), Positives = 58/68 (85%)
 Frame = +2

Query: 182  RF*KMVHFIPCSKAADASHIADLFFKEVVRLHGLPKSIVSDRDVKFMGHFWRTLWRKMGT 361
            RF KM HFIPC K  DA+HIADLFF+E+VRLHG+P +IVSDRD KF+ HFWRTLW K+GT
Sbjct: 1294 RFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSHFWRTLWAKLGT 1353

Query: 362  ELKYSSTC 385
            +L +S+TC
Sbjct: 1354 KLLFSTTC 1361



 Score = 56.2 bits (134), Expect(2) = 2e-33
 Identities = 27/58 (46%), Positives = 34/58 (58%)
 Frame = +3

Query: 6    MYKYVQKIVKRCQKCQFGKDSSQNTSLYMSLQTPKADWVHLSMDFVLGLPKTAKGFDT 179
            M + V ++V RC  CQ  K       LY+ L  P A W  +SMDFVLGLP+T KG D+
Sbjct: 1230 MRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKGRDS 1287