BLASTX nr result
ID: Aconitum23_contig00030486
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00030486
(460 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011028325.1| PREDICTED: ATP-dependent RNA helicase DHX29 ... 94 4e-17
ref|XP_011028322.1| PREDICTED: ATP-dependent RNA helicase Dhx29 ... 94 4e-17
ref|XP_006385023.1| hypothetical protein POPTR_0004s231601g, par... 91 3e-16
ref|XP_010256332.1| PREDICTED: ATP-dependent RNA helicase DHX36 ... 89 1e-15
ref|XP_010256331.1| PREDICTED: ATP-dependent RNA helicase DHX36 ... 87 4e-15
gb|KDO47814.1| hypothetical protein CISIN_1g0472021mg, partial [... 85 2e-14
ref|XP_006494371.1| PREDICTED: ATP-dependent RNA helicase DHX29-... 85 2e-14
ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-... 85 2e-14
ref|XP_006431710.1| hypothetical protein CICLE_v100000302mg, par... 85 2e-14
ref|XP_006431709.1| hypothetical protein CICLE_v100000302mg, par... 85 2e-14
ref|XP_010314576.1| PREDICTED: ATP-dependent RNA helicase DHX36 ... 84 3e-14
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ... 84 3e-14
ref|XP_006349342.1| PREDICTED: ATP-dependent RNA helicase Dhx29-... 84 3e-14
ref|XP_009599886.1| PREDICTED: ATP-dependent RNA helicase DHX36 ... 84 4e-14
ref|XP_009599885.1| PREDICTED: ATP-dependent RNA helicase DHX36 ... 84 4e-14
ref|XP_009785200.1| PREDICTED: ATP-dependent RNA helicase DHX36 ... 83 9e-14
ref|XP_010658001.1| PREDICTED: ATP-dependent RNA helicase DHX29 ... 82 1e-13
ref|XP_007041297.1| ATP-dependent RNA helicase, putative isoform... 82 1e-13
ref|XP_007041294.1| ATP-dependent RNA helicase, putative isoform... 82 1e-13
emb|CAN65165.1| hypothetical protein VITISV_002615 [Vitis vinifera] 82 1e-13
>ref|XP_011028325.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform X4 [Populus
euphratica]
Length = 1164
Score = 94.0 bits (232), Expect = 4e-17
Identities = 66/169 (39%), Positives = 83/169 (49%), Gaps = 42/169 (24%)
Frame = -1
Query: 400 KSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINCNV 221
K+ILCAGLYPNVAATE I LK SSR +K HP+WYD RR V+IHPSS+NCNV
Sbjct: 996 KAILCAGLYPNVAATEHGITAATLN-GLKQSSRPGKKGHPIWYDGRREVHIHPSSVNCNV 1054
Query: 220 KAFSAHFWSTLKKLDRSQ*MV----------------G*N*QYMPNL------------- 128
KAF F L+K++ ++ + N Q+ L
Sbjct: 1055 KAFPHPFLVFLEKVETNKVFLRDTTIISPFSILLFGGAINIQHQTGLLTIDGWLKLTASA 1114
Query: 127 ----LFCSRNSD*HYIEK---------TAVENEVVRSFIHSLLEENKAQ 20
LF S H + K T V+NEVV+S I LL+E+K Q
Sbjct: 1115 QYAVLFKELRSTLHALLKELIRKPENATLVDNEVVKSMIQLLLDEDKPQ 1163
>ref|XP_011028322.1| PREDICTED: ATP-dependent RNA helicase Dhx29 isoform X1 [Populus
euphratica]
Length = 1455
Score = 94.0 bits (232), Expect = 4e-17
Identities = 66/169 (39%), Positives = 83/169 (49%), Gaps = 42/169 (24%)
Frame = -1
Query: 400 KSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINCNV 221
K+ILCAGLYPNVAATE I LK SSR +K HP+WYD RR V+IHPSS+NCNV
Sbjct: 1287 KAILCAGLYPNVAATEHGITAATLN-GLKQSSRPGKKGHPIWYDGRREVHIHPSSVNCNV 1345
Query: 220 KAFSAHFWSTLKKLDRSQ*MV----------------G*N*QYMPNL------------- 128
KAF F L+K++ ++ + N Q+ L
Sbjct: 1346 KAFPHPFLVFLEKVETNKVFLRDTTIISPFSILLFGGAINIQHQTGLLTIDGWLKLTASA 1405
Query: 127 ----LFCSRNSD*HYIEK---------TAVENEVVRSFIHSLLEENKAQ 20
LF S H + K T V+NEVV+S I LL+E+K Q
Sbjct: 1406 QYAVLFKELRSTLHALLKELIRKPENATLVDNEVVKSMIQLLLDEDKPQ 1454
>ref|XP_006385023.1| hypothetical protein POPTR_0004s231601g, partial [Populus
trichocarpa] gi|550341791|gb|ERP62820.1| hypothetical
protein POPTR_0004s231601g, partial [Populus trichocarpa]
Length = 1051
Score = 90.9 bits (224), Expect = 3e-16
Identities = 65/169 (38%), Positives = 83/169 (49%), Gaps = 42/169 (24%)
Frame = -1
Query: 400 KSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINCNV 221
K+ILCAGLYPNVAATE I LK SSR +K HP+WYD RR V+IHPSS+NCN+
Sbjct: 883 KAILCAGLYPNVAATELGITAATLN-GLKQSSRPGKKDHPIWYDGRREVHIHPSSVNCNM 941
Query: 220 KAFSAHFWSTLKKLDRSQ*MV----------------G*N*QYMPNL------------- 128
KAF F L+K++ ++ + N Q+ L
Sbjct: 942 KAFPHPFLVFLEKVETNKVFLRDTTIISPFSILLFGGEINIQHQTGLLTIDGWLKLKASA 1001
Query: 127 ----LFCSRNSD*HYIEK---------TAVENEVVRSFIHSLLEENKAQ 20
LF S H + K T V+NEVV+S I LL+E+K Q
Sbjct: 1002 QYAVLFKELRSTLHALLKELIRKPENATLVDNEVVKSMIQLLLDEDKPQ 1050
>ref|XP_010256332.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Nelumbo
nucifera]
Length = 1436
Score = 89.0 bits (219), Expect = 1e-15
Identities = 63/166 (37%), Positives = 76/166 (45%), Gaps = 41/166 (24%)
Frame = -1
Query: 400 KSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINCNV 221
KS+LCAGLYPNVAATEE IV G K S+ T K P WYD RR V IHPSSIN N+
Sbjct: 1268 KSVLCAGLYPNVAATEEGIVGFTLGSTQKPSASTGIKGCPFWYDGRREVQIHPSSINSNI 1327
Query: 220 KAFSAHFWSTLKKLDRSQ*MV----------------G*N*QYMPNL------------- 128
KAF F L+K++ ++ + N Q+ +
Sbjct: 1328 KAFQYPFLVFLEKVETNKVFLRDTSIISPYSILLFGGSINIQHQTGMVVIDGWLKLKAPA 1387
Query: 127 ----LFCSRNSD*HYI--------EKTAVENEVVRSFIHSLLEENK 26
LF H + E V NEV+ S IH LLEENK
Sbjct: 1388 QTAVLFKELRLTLHAVLKELIKKPETKVVNNEVIESIIHLLLEENK 1433
>ref|XP_010256331.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Nelumbo
nucifera]
Length = 1454
Score = 87.4 bits (215), Expect = 4e-15
Identities = 44/78 (56%), Positives = 52/78 (66%)
Frame = -1
Query: 400 KSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINCNV 221
KS+LCAGLYPNVAATEE IV G K S+ T K P WYD RR V IHPSSIN N+
Sbjct: 1268 KSVLCAGLYPNVAATEEGIVGFTLGSTQKPSASTGIKGCPFWYDGRREVQIHPSSINSNI 1327
Query: 220 KAFSAHFWSTLKKLDRSQ 167
KAF F L+K++ ++
Sbjct: 1328 KAFQYPFLVFLEKVETNK 1345
>gb|KDO47814.1| hypothetical protein CISIN_1g0472021mg, partial [Citrus sinensis]
Length = 485
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNVAATE+ + NL+ SS ++ K+HP+WYD RR V+IHPSSIN
Sbjct: 315 IVKAILCAGLYPNVAATEQGVAGAALS-NLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 373
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
+K+F F L+K++ ++
Sbjct: 374 QLKSFEHPFLVFLEKVETNK 393
Score = 59.7 bits (143), Expect(2) = 1e-09
Identities = 39/89 (43%), Positives = 44/89 (49%), Gaps = 32/89 (35%)
Frame = -3
Query: 263 KRSLHT-PIIYQLQCKSFQCPFLVYLEK-------------------------------T 180
+R +H P Q KSF+ PFLV+LEK T
Sbjct: 361 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT 420
Query: 179 GQVAIDGWLKLTVHAQPAVLFKELRLTLH 93
GQV IDGWLK+T AQ AVLFKELRLTLH
Sbjct: 421 GQVTIDGWLKVTAPAQTAVLFKELRLTLH 449
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1
Query: 85 TAVENEVVRSFIHSLLEENKAQK 17
T NEVV+S I LLEE+K QK
Sbjct: 463 TIANNEVVKSMIQLLLEEDKPQK 485
>ref|XP_006494371.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X2 [Citrus
sinensis]
Length = 1245
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNVAATE+ + NL+ SS ++ K+HP+WYD RR V+IHPSSIN
Sbjct: 1075 IVKAILCAGLYPNVAATEQGVAGAALS-NLRKSSNSTAKAHPVWYDGRREVHIHPSSINS 1133
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
+K+F F L+K++ ++
Sbjct: 1134 QLKSFEHPFLVFLEKVETNK 1153
Score = 59.7 bits (143), Expect(2) = 1e-09
Identities = 39/89 (43%), Positives = 44/89 (49%), Gaps = 32/89 (35%)
Frame = -3
Query: 263 KRSLHT-PIIYQLQCKSFQCPFLVYLEK-------------------------------T 180
+R +H P Q KSF+ PFLV+LEK T
Sbjct: 1121 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT 1180
Query: 179 GQVAIDGWLKLTVHAQPAVLFKELRLTLH 93
GQV IDGWLK+T AQ AVLFKELRLTLH
Sbjct: 1181 GQVTIDGWLKVTAPAQTAVLFKELRLTLH 1209
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1
Query: 85 TAVENEVVRSFIHSLLEENKAQK 17
T NEVV+S I LLEE+K QK
Sbjct: 1223 TIANNEVVKSMIQLLLEEDKPQK 1245
>ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Citrus
sinensis]
Length = 1455
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNVAATE+ + NL+ SS ++ K+HP+WYD RR V+IHPSSIN
Sbjct: 1285 IVKAILCAGLYPNVAATEQGVAGAALS-NLRKSSNSTAKAHPVWYDGRREVHIHPSSINS 1343
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
+K+F F L+K++ ++
Sbjct: 1344 QLKSFEHPFLVFLEKVETNK 1363
Score = 59.7 bits (143), Expect(2) = 1e-09
Identities = 39/89 (43%), Positives = 44/89 (49%), Gaps = 32/89 (35%)
Frame = -3
Query: 263 KRSLHT-PIIYQLQCKSFQCPFLVYLEK-------------------------------T 180
+R +H P Q KSF+ PFLV+LEK T
Sbjct: 1331 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT 1390
Query: 179 GQVAIDGWLKLTVHAQPAVLFKELRLTLH 93
GQV IDGWLK+T AQ AVLFKELRLTLH
Sbjct: 1391 GQVTIDGWLKVTAPAQTAVLFKELRLTLH 1419
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1
Query: 85 TAVENEVVRSFIHSLLEENKAQK 17
T NEVV+S I LLEE+K QK
Sbjct: 1433 TIANNEVVKSMIQLLLEEDKPQK 1455
>ref|XP_006431710.1| hypothetical protein CICLE_v100000302mg, partial [Citrus
clementina] gi|557533832|gb|ESR44950.1| hypothetical
protein CICLE_v100000302mg, partial [Citrus clementina]
Length = 332
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNVAATE+ + NL+ SS ++ K+HP+WYD RR V+IHPSSIN
Sbjct: 184 IVKAILCAGLYPNVAATEQGVAGAALS-NLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 242
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
+K+F F L+K++ ++
Sbjct: 243 QLKSFEHPFLVFLEKVETNK 262
Score = 58.9 bits (141), Expect = 1e-06
Identities = 39/89 (43%), Positives = 44/89 (49%), Gaps = 32/89 (35%)
Frame = -3
Query: 263 KRSLHT-PIIYQLQCKSFQCPFLVYLEK-------------------------------T 180
+R +H P Q KSF+ PFLV+LEK T
Sbjct: 230 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT 289
Query: 179 GQVAIDGWLKLTVHAQPAVLFKELRLTLH 93
GQV IDGWLK+T AQ AVLFKELRLTLH
Sbjct: 290 GQVTIDGWLKVTAPAQIAVLFKELRLTLH 318
>ref|XP_006431709.1| hypothetical protein CICLE_v100000302mg, partial [Citrus
clementina] gi|557533831|gb|ESR44949.1| hypothetical
protein CICLE_v100000302mg, partial [Citrus clementina]
Length = 354
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNVAATE+ + NL+ SS ++ K+HP+WYD RR V+IHPSSIN
Sbjct: 184 IVKAILCAGLYPNVAATEQGVAGAALS-NLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 242
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
+K+F F L+K++ ++
Sbjct: 243 QLKSFEHPFLVFLEKVETNK 262
Score = 58.9 bits (141), Expect(2) = 2e-09
Identities = 39/89 (43%), Positives = 44/89 (49%), Gaps = 32/89 (35%)
Frame = -3
Query: 263 KRSLHT-PIIYQLQCKSFQCPFLVYLEK-------------------------------T 180
+R +H P Q KSF+ PFLV+LEK T
Sbjct: 230 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT 289
Query: 179 GQVAIDGWLKLTVHAQPAVLFKELRLTLH 93
GQV IDGWLK+T AQ AVLFKELRLTLH
Sbjct: 290 GQVTIDGWLKVTAPAQIAVLFKELRLTLH 318
Score = 29.3 bits (64), Expect(2) = 2e-09
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1
Query: 85 TAVENEVVRSFIHSLLEENKAQK 17
T NEVV+S I LLEE+K QK
Sbjct: 332 TIANNEVVKSMIQLLLEEDKPQK 354
>ref|XP_010314576.1| PREDICTED: ATP-dependent RNA helicase DHX36 [Solanum lycopersicum]
Length = 1438
Score = 84.3 bits (207), Expect = 3e-14
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
+ K+ILCAGLYPNV+A EE I G NLK S+ S KS+P WYD +R V+IHPSSIN
Sbjct: 1268 VLKAILCAGLYPNVSAREEGIATTALG-NLKQSANNSAKSNPAWYDGKREVHIHPSSINS 1326
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
++KAF F L+K++ ++
Sbjct: 1327 DLKAFQYPFLVFLEKVETNK 1346
>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform X2 [Vitis
vinifera] gi|297739540|emb|CBI29722.3| unnamed protein
product [Vitis vinifera]
Length = 1458
Score = 84.3 bits (207), Expect = 3e-14
Identities = 63/172 (36%), Positives = 82/172 (47%), Gaps = 42/172 (24%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNVAATE+ I V G N+ SS ++ K P+WYD RR V+IHPSSIN
Sbjct: 1288 IVKAILCAGLYPNVAATEQGIAGVALG-NIIQSSGSATKGRPVWYDGRREVHIHPSSING 1346
Query: 226 NVKAFSAHFWSTLKKLDRSQ*MV----------------G*N*QYMPNL----------- 128
N+ AF F L+K++ ++ + N Q+ +
Sbjct: 1347 NLNAFQYPFLVFLEKVETNKVFLRDTTIISPYSILLFGGSINVQHQSGMVNIDGWLKLAA 1406
Query: 127 ------LFCSRNSD*HYIEK---------TAVENEVVRSFIHSLLEENKAQK 17
LF H + K V NEVV+S IH LLEE K+ K
Sbjct: 1407 PAQIAVLFKELRVTLHSVLKELIRKPEKAIVVNNEVVKSIIHLLLEEEKSPK 1458
>ref|XP_006349342.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Solanum tuberosum]
Length = 1438
Score = 84.3 bits (207), Expect = 3e-14
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
+ K+ILCAGLYPNV+A EE I G NLK S+ S KS+P WYD +R V+IHPSSIN
Sbjct: 1268 VLKAILCAGLYPNVSAREEGIATTALG-NLKQSANVSAKSNPAWYDGKREVHIHPSSINS 1326
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
++KAF F L+K++ ++
Sbjct: 1327 DLKAFQYPFLVFLEKVETNK 1346
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 38/102 (37%), Positives = 46/102 (45%), Gaps = 32/102 (31%)
Frame = -3
Query: 302 NIKKESSTLV*QQKRSLHT-PIIYQLQCKSFQCPFLVYLEK------------------- 183
N+ +S+ KR +H P K+FQ PFLV+LEK
Sbjct: 1301 NVSAKSNPAWYDGKREVHIHPSSINSDLKAFQYPFLVFLEKVETNKVFLRDTTVVSPYTI 1360
Query: 182 ------------TGQVAIDGWLKLTVHAQPAVLFKELRLTLH 93
TG V IDGWL++ AQ AVLFKELRLTLH
Sbjct: 1361 LLFGGPINVQHQTGTVTIDGWLEVAAPAQTAVLFKELRLTLH 1402
Score = 26.9 bits (58), Expect(2) = 2e-07
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -1
Query: 76 ENEVVRSFIHSLLEENKAQK 17
+NEV+RS I LLEE+K +K
Sbjct: 1419 DNEVLRSIIQLLLEEDKQRK 1438
>ref|XP_009599886.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Nicotiana
tomentosiformis]
Length = 1441
Score = 84.0 bits (206), Expect = 4e-14
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNV+A EE I G NLK S+ S KS+P WYD RR V+IHPSSIN
Sbjct: 1271 ILKAILCAGLYPNVSAREEGIATTALG-NLKQSAGLSAKSNPAWYDGRREVHIHPSSINS 1329
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
N+K F F L+K++ ++
Sbjct: 1330 NLKDFQYPFIVFLEKVETNK 1349
Score = 52.0 bits (123), Expect(2) = 2e-06
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 32/89 (35%)
Frame = -3
Query: 263 KRSLHT-PIIYQLQCKSFQCPFLVYLEK-------------------------------T 180
+R +H P K FQ PF+V+LEK T
Sbjct: 1317 RREVHIHPSSINSNLKDFQYPFIVFLEKVETNKVFLRDTTVISPYTILLFGGPINIQHQT 1376
Query: 179 GQVAIDGWLKLTVHAQPAVLFKELRLTLH 93
G+V IDGWL++ AQ AVLFKELRLTLH
Sbjct: 1377 GRVTIDGWLEVAAPAQTAVLFKELRLTLH 1405
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 76 ENEVVRSFIHSLLEENKAQK 17
+NEV+RS + LLEE+K +K
Sbjct: 1422 DNEVLRSIVQLLLEEDKQRK 1441
>ref|XP_009599885.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Nicotiana
tomentosiformis]
Length = 1460
Score = 84.0 bits (206), Expect = 4e-14
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNV+A EE I G NLK S+ S KS+P WYD RR V+IHPSSIN
Sbjct: 1290 ILKAILCAGLYPNVSAREEGIATTALG-NLKQSAGLSAKSNPAWYDGRREVHIHPSSINS 1348
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
N+K F F L+K++ ++
Sbjct: 1349 NLKDFQYPFIVFLEKVETNK 1368
Score = 52.0 bits (123), Expect(2) = 2e-06
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 32/89 (35%)
Frame = -3
Query: 263 KRSLHT-PIIYQLQCKSFQCPFLVYLEK-------------------------------T 180
+R +H P K FQ PF+V+LEK T
Sbjct: 1336 RREVHIHPSSINSNLKDFQYPFIVFLEKVETNKVFLRDTTVISPYTILLFGGPINIQHQT 1395
Query: 179 GQVAIDGWLKLTVHAQPAVLFKELRLTLH 93
G+V IDGWL++ AQ AVLFKELRLTLH
Sbjct: 1396 GRVTIDGWLEVAAPAQTAVLFKELRLTLH 1424
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 76 ENEVVRSFIHSLLEENKAQK 17
+NEV+RS + LLEE+K +K
Sbjct: 1441 DNEVLRSIVQLLLEEDKQRK 1460
>ref|XP_009785200.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Nicotiana
sylvestris]
Length = 1443
Score = 82.8 bits (203), Expect = 9e-14
Identities = 43/80 (53%), Positives = 55/80 (68%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNV+A EE I G NLK ++ S KS+P WYD RR V+IHPSSIN
Sbjct: 1273 ILKAILCAGLYPNVSAREEGIATTALG-NLKQNAGLSAKSNPAWYDGRREVHIHPSSINS 1331
Query: 226 NVKAFSAHFWSTLKKLDRSQ 167
N+K F F L+K++ ++
Sbjct: 1332 NLKDFQYPFIVFLEKVETNK 1351
>ref|XP_010658001.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Vitis
vinifera]
Length = 1464
Score = 82.4 bits (202), Expect = 1e-13
Identities = 61/170 (35%), Positives = 81/170 (47%), Gaps = 42/170 (24%)
Frame = -1
Query: 400 KSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINCNV 221
++ILCAGLYPNVAATE+ I V G N+ SS ++ K P+WYD RR V+IHPSSIN N+
Sbjct: 1296 QAILCAGLYPNVAATEQGIAGVALG-NIIQSSGSATKGRPVWYDGRREVHIHPSSINGNL 1354
Query: 220 KAFSAHFWSTLKKLDRSQ*MV----------------G*N*QYMPNL------------- 128
AF F L+K++ ++ + N Q+ +
Sbjct: 1355 NAFQYPFLVFLEKVETNKVFLRDTTIISPYSILLFGGSINVQHQSGMVNIDGWLKLAAPA 1414
Query: 127 ----LFCSRNSD*HYIEK---------TAVENEVVRSFIHSLLEENKAQK 17
LF H + K V NEVV+S IH LLEE K+ K
Sbjct: 1415 QIAVLFKELRVTLHSVLKELIRKPEKAIVVNNEVVKSIIHLLLEEEKSPK 1464
>ref|XP_007041297.1| ATP-dependent RNA helicase, putative isoform 4 [Theobroma cacao]
gi|508705232|gb|EOX97128.1| ATP-dependent RNA helicase,
putative isoform 4 [Theobroma cacao]
Length = 991
Score = 82.4 bits (202), Expect = 1e-13
Identities = 66/167 (39%), Positives = 82/167 (49%), Gaps = 42/167 (25%)
Frame = -1
Query: 400 KSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINCNV 221
K+ILCAGLYPNVAATE I V R LK S T K HP+WYD RR V+IHPSSIN ++
Sbjct: 824 KAILCAGLYPNVAATELGITGVALSR-LKHSPAT--KGHPVWYDGRREVHIHPSSINSSL 880
Query: 220 KAFSAHFWSTLKKLDRSQ*MVG----------------*N*QYMPNL------------- 128
KAF F L+K++ ++ + N Q+ L
Sbjct: 881 KAFQHPFIVFLEKVETNKVFLRDTTIISPFSILLFGGLINIQHQSGLVAIDGWLKLTAPA 940
Query: 127 ---LFCSR-NSD*HYIEK---------TAVENEVVRSFIHSLLEENK 26
+ C S H I K T V+NEVV+S IH LLEE+K
Sbjct: 941 QTAVLCKELRSALHSILKELIKKPENATIVDNEVVKSMIHLLLEEDK 987
>ref|XP_007041294.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
gi|590682240|ref|XP_007041295.1| ATP-dependent RNA
helicase, putative isoform 1 [Theobroma cacao]
gi|508705229|gb|EOX97125.1| ATP-dependent RNA helicase,
putative isoform 1 [Theobroma cacao]
gi|508705230|gb|EOX97126.1| ATP-dependent RNA helicase,
putative isoform 1 [Theobroma cacao]
Length = 1457
Score = 82.4 bits (202), Expect = 1e-13
Identities = 66/167 (39%), Positives = 82/167 (49%), Gaps = 42/167 (25%)
Frame = -1
Query: 400 KSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINCNV 221
K+ILCAGLYPNVAATE I V R LK S T K HP+WYD RR V+IHPSSIN ++
Sbjct: 1290 KAILCAGLYPNVAATELGITGVALSR-LKHSPAT--KGHPVWYDGRREVHIHPSSINSSL 1346
Query: 220 KAFSAHFWSTLKKLDRSQ*MVG----------------*N*QYMPNL------------- 128
KAF F L+K++ ++ + N Q+ L
Sbjct: 1347 KAFQHPFIVFLEKVETNKVFLRDTTIISPFSILLFGGLINIQHQSGLVAIDGWLKLTAPA 1406
Query: 127 ---LFCSR-NSD*HYIEK---------TAVENEVVRSFIHSLLEENK 26
+ C S H I K T V+NEVV+S IH LLEE+K
Sbjct: 1407 QTAVLCKELRSALHSILKELIKKPENATIVDNEVVKSMIHLLLEEDK 1453
>emb|CAN65165.1| hypothetical protein VITISV_002615 [Vitis vinifera]
Length = 260
Score = 82.4 bits (202), Expect = 1e-13
Identities = 62/172 (36%), Positives = 81/172 (47%), Gaps = 42/172 (24%)
Frame = -1
Query: 406 IRKSILCAGLYPNVAATEEEIVDVGFGRNLKTSSRTSRKSHPLWYDSRRGVYIHPSSINC 227
I K+ILCAGLYPNVAATE+ I G N+ SS ++ K P+WYD RR V+IHPSSIN
Sbjct: 90 IVKAILCAGLYPNVAATEQGIAGXALG-NIIQSSGSATKGRPVWYDGRREVHIHPSSING 148
Query: 226 NVKAFSAHFWSTLKKLDRSQ*MV----------------G*N*QYMPNL----------- 128
N+ AF F L+K++ ++ + N Q+ +
Sbjct: 149 NLNAFQYPFLVFLEKVETNKVFLRDTTIISPYSILLFGGSINVQHQSGMVNIDGWLKLAA 208
Query: 127 ------LFCSRNSD*HYIEK---------TAVENEVVRSFIHSLLEENKAQK 17
LF H + K V NEVV+S IH LLEE K+ K
Sbjct: 209 PAQIAVLFKELRVTLHSVLKELIRKPEKAIVVNNEVVKSIIHLLLEEEKSPK 260