BLASTX nr result
ID: Aconitum23_contig00030462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00030462
(499 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryz... 101 2e-19
ref|XP_010257747.1| PREDICTED: U11/U12 small nuclear ribonucleop... 94 3e-17
ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group] g... 93 9e-17
ref|XP_004984515.1| PREDICTED: U11/U12 small nuclear ribonucleop... 91 3e-16
ref|XP_010921293.1| PREDICTED: LOW QUALITY PROTEIN: U11/U12 smal... 90 6e-16
ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [S... 90 6e-16
ref|XP_009417857.1| PREDICTED: U11/U12 small nuclear ribonucleop... 90 7e-16
ref|XP_008782764.1| PREDICTED: LOW QUALITY PROTEIN: U11/U12 smal... 89 2e-15
ref|XP_007030223.1| RNA-binding family protein isoform 6 [Theobr... 89 2e-15
ref|XP_007030221.1| RNA-binding family protein isoform 4 [Theobr... 89 2e-15
ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobr... 89 2e-15
gb|KHF98520.1| RNA-binding 40 [Gossypium arboreum] 88 2e-15
ref|NP_001132325.1| hypothetical protein [Zea mays] gi|670358256... 88 2e-15
tpg|DAA45145.1| TPA: hypothetical protein ZEAMMB73_529929 [Zea m... 88 2e-15
ref|XP_006853102.2| PREDICTED: U11/U12 small nuclear ribonucleop... 87 4e-15
ref|XP_011088707.1| PREDICTED: U11/U12 small nuclear ribonucleop... 87 4e-15
ref|XP_010650296.1| PREDICTED: U11/U12 small nuclear ribonucleop... 87 4e-15
ref|XP_010650295.1| PREDICTED: U11/U12 small nuclear ribonucleop... 87 4e-15
gb|KDO45535.1| hypothetical protein CISIN_1g043634mg, partial [C... 87 4e-15
ref|XP_002270244.2| PREDICTED: U11/U12 small nuclear ribonucleop... 87 4e-15
>ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryza brachyantha]
Length = 460
Score = 101 bits (252), Expect = 2e-19
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 3/68 (4%)
Frame = +1
Query: 304 PPPASAPLHQGQPPSSV---ATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNC 474
PPPA PL Q QPP S ATLLVRHLPEAIPQ+ L RLFSHYGA +VRPCA G+LRNC
Sbjct: 16 PPPAPPPLLQQQPPGSAPAAATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNC 75
Query: 475 AFVDFQTE 498
AFVDF+ E
Sbjct: 76 AFVDFRDE 83
>ref|XP_010257747.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
protein-like [Nelumbo nucifera]
gi|720005730|ref|XP_010257748.1| PREDICTED: U11/U12
small nuclear ribonucleoprotein 65 kDa protein-like
[Nelumbo nucifera] gi|720005733|ref|XP_010257749.1|
PREDICTED: U11/U12 small nuclear ribonucleoprotein 65
kDa protein-like [Nelumbo nucifera]
gi|720005736|ref|XP_010257750.1| PREDICTED: U11/U12
small nuclear ribonucleoprotein 65 kDa protein-like
[Nelumbo nucifera]
Length = 298
Score = 94.4 bits (233), Expect = 3e-17
Identities = 47/69 (68%), Positives = 50/69 (72%)
Frame = +1
Query: 292 SSGHPPPASAPLHQGQPPSSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRN 471
S P PA + SSV TLLVRHLPEAIP DTL RLFSHYGA +VRPCA GRLRN
Sbjct: 14 SDQEPSPALTAKSPQEDESSVVTLLVRHLPEAIPPDTLSRLFSHYGAFSVRPCAGGRLRN 73
Query: 472 CAFVDFQTE 498
CAFVDF+ E
Sbjct: 74 CAFVDFKDE 82
>ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group]
gi|108707928|gb|ABF95723.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548464|dbj|BAF11907.1| Os03g0326600 [Oryza sativa
Japonica Group] gi|218192743|gb|EEC75170.1| hypothetical
protein OsI_11395 [Oryza sativa Indica Group]
gi|937909080|dbj|BAS84000.1| Os03g0326600 [Oryza sativa
Japonica Group]
Length = 467
Score = 92.8 bits (229), Expect = 9e-17
Identities = 46/67 (68%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Frame = +1
Query: 307 PPASAPLHQGQPPSSV---ATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCA 477
PP Q QPP S ATLLVRHLPEAIPQ+ L RLFSHYGA +VRPCA G+LRNCA
Sbjct: 24 PPPPPQQQQQQPPGSAPPAATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCA 83
Query: 478 FVDFQTE 498
FVDF+ E
Sbjct: 84 FVDFRDE 90
>ref|XP_004984515.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Setaria italica] gi|944226658|gb|KQK91062.1|
hypothetical protein SETIT_035599mg [Setaria italica]
Length = 459
Score = 91.3 bits (225), Expect = 3e-16
Identities = 45/67 (67%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Frame = +1
Query: 307 PPASAPLHQGQP---PSSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCA 477
P PL Q QP P+ ATLLVRHLPEAI Q+ L RLFSHYGA +VRPCA G+LRNCA
Sbjct: 16 PATPPPLQQQQPGPAPAGAATLLVRHLPEAITQEMLSRLFSHYGATSVRPCAGGKLRNCA 75
Query: 478 FVDFQTE 498
FVDF+ E
Sbjct: 76 FVDFRDE 82
>ref|XP_010921293.1| PREDICTED: LOW QUALITY PROTEIN: U11/U12 small nuclear
ribonucleoprotein 65 kDa protein [Elaeis guineensis]
Length = 467
Score = 90.1 bits (222), Expect = 6e-16
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = +1
Query: 334 GQPPSSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAFVDFQTE 498
G ++ ATLLVRHLPEAIPQ+ L RLFSHYGAC+VRPCA G++RNCAFVDF+ E
Sbjct: 36 GAEAAAAATLLVRHLPEAIPQEMLSRLFSHYGACSVRPCAGGKMRNCAFVDFKDE 90
>ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [Sorghum bicolor]
gi|241919185|gb|EER92329.1| hypothetical protein
SORBIDRAFT_01g036600 [Sorghum bicolor]
Length = 467
Score = 90.1 bits (222), Expect = 6e-16
Identities = 48/83 (57%), Positives = 56/83 (67%), Gaps = 8/83 (9%)
Frame = +1
Query: 274 PRTMNYSSGHPPPASAP-LH-------QGQPPSSVATLLVRHLPEAIPQDTLFRLFSHYG 429
P T+ + P PA+ P LH QG P ATLLVRHLPEAI Q+ L RLFSHYG
Sbjct: 8 PHTLPPTPTAPYPATPPPLHHHHHQQQQGPAPPGAATLLVRHLPEAITQEMLSRLFSHYG 67
Query: 430 ACAVRPCAAGRLRNCAFVDFQTE 498
A +VRPC+ G+LRNCAFVDF+ E
Sbjct: 68 ATSVRPCSGGKLRNCAFVDFRDE 90
>ref|XP_009417857.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Musa acuminata subsp. malaccensis]
gi|695059036|ref|XP_009417858.1| PREDICTED: U11/U12
small nuclear ribonucleoprotein 65 kDa protein [Musa
acuminata subsp. malaccensis]
Length = 469
Score = 89.7 bits (221), Expect = 7e-16
Identities = 44/69 (63%), Positives = 50/69 (72%), Gaps = 4/69 (5%)
Frame = +1
Query: 304 PPPASAPLHQGQPP----SSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRN 471
PPP S P +G ++ ATLLVRHLPEA+P D L RLFSHYGA +VRPCA GRLRN
Sbjct: 23 PPPNSVPAAEGSSGGAGVAAAATLLVRHLPEAMPFDVLSRLFSHYGASSVRPCAGGRLRN 82
Query: 472 CAFVDFQTE 498
C FVDF+ E
Sbjct: 83 CTFVDFKDE 91
>ref|XP_008782764.1| PREDICTED: LOW QUALITY PROTEIN: U11/U12 small nuclear
ribonucleoprotein 65 kDa protein [Phoenix dactylifera]
Length = 469
Score = 88.6 bits (218), Expect = 2e-15
Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 10/74 (13%)
Frame = +1
Query: 307 PPASAPLHQ----------GQPPSSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAA 456
PPA+AP G ++ ATLLVRHLPEAIPQ+ L RLFSHYGA +VRPCA
Sbjct: 17 PPATAPQQHSMFNAEEAPAGAGAAAAATLLVRHLPEAIPQEMLSRLFSHYGASSVRPCAG 76
Query: 457 GRLRNCAFVDFQTE 498
G++RNCAFVDF+ E
Sbjct: 77 GKMRNCAFVDFKDE 90
>ref|XP_007030223.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508718828|gb|EOY10725.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 436
Score = 88.6 bits (218), Expect = 2e-15
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 349 SVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAFVDFQTE 498
SV TLL+RHLPEAIP DTL RLFSHYGA +VRPC++G+LRNCAFVDF+ E
Sbjct: 35 SVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNE 84
>ref|XP_007030221.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508718826|gb|EOY10723.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 487
Score = 88.6 bits (218), Expect = 2e-15
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 349 SVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAFVDFQTE 498
SV TLL+RHLPEAIP DTL RLFSHYGA +VRPC++G+LRNCAFVDF+ E
Sbjct: 35 SVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNE 84
>ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590641397|ref|XP_007030219.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590641400|ref|XP_007030220.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508718823|gb|EOY10720.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508718824|gb|EOY10721.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508718825|gb|EOY10722.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 479
Score = 88.6 bits (218), Expect = 2e-15
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 349 SVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAFVDFQTE 498
SV TLL+RHLPEAIP DTL RLFSHYGA +VRPC++G+LRNCAFVDF+ E
Sbjct: 35 SVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNE 84
>gb|KHF98520.1| RNA-binding 40 [Gossypium arboreum]
Length = 464
Score = 88.2 bits (217), Expect = 2e-15
Identities = 39/50 (78%), Positives = 46/50 (92%)
Frame = +1
Query: 349 SVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAFVDFQTE 498
SVATLL+RHLPEAIP +TL RLFSHYGA +VRPC++G+LRNCAFVDF+ E
Sbjct: 35 SVATLLIRHLPEAIPPETLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNE 84
>ref|NP_001132325.1| hypothetical protein [Zea mays] gi|670358256|ref|XP_008655771.1|
PREDICTED: hypothetical protein isoform X1 [Zea mays]
gi|194694084|gb|ACF81126.1| unknown [Zea mays]
gi|414866589|tpg|DAA45146.1| TPA: hypothetical protein
ZEAMMB73_529929 [Zea mays] gi|414866590|tpg|DAA45147.1|
TPA: hypothetical protein ZEAMMB73_529929 [Zea mays]
Length = 450
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +1
Query: 301 HPPPASAPLHQGQPPSSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAF 480
H +++ QG P+ ATLLVRHLPEAI Q+ L RLFSHYGA +VRPC+ G+LRNCAF
Sbjct: 8 HIDRSASDQQQGPAPAGAATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCAF 67
Query: 481 VDFQTE 498
VDF+ E
Sbjct: 68 VDFRDE 73
>tpg|DAA45145.1| TPA: hypothetical protein ZEAMMB73_529929 [Zea mays]
Length = 396
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +1
Query: 301 HPPPASAPLHQGQPPSSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAF 480
H +++ QG P+ ATLLVRHLPEAI Q+ L RLFSHYGA +VRPC+ G+LRNCAF
Sbjct: 8 HIDRSASDQQQGPAPAGAATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCAF 67
Query: 481 VDFQTE 498
VDF+ E
Sbjct: 68 VDFRDE 73
>ref|XP_006853102.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Amborella trichopoda]
Length = 476
Score = 87.4 bits (215), Expect = 4e-15
Identities = 43/69 (62%), Positives = 49/69 (71%)
Frame = +1
Query: 292 SSGHPPPASAPLHQGQPPSSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRN 471
+S +P P PL ATLLVRHLPEAIP +TL RLFSHYGA +VRPCA GRLRN
Sbjct: 10 ASLNPTPQPQPLGTFNGEEKTATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRN 69
Query: 472 CAFVDFQTE 498
AFVDF+ +
Sbjct: 70 AAFVDFKDD 78
>ref|XP_011088707.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Sesamum indicum]
Length = 441
Score = 87.4 bits (215), Expect = 4e-15
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 328 HQGQPPSSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAFVDFQTE 498
H G S TLLVRHLPEAIP DTL RLFSHYGA +VRPC+ GR++NCAFVDF+ E
Sbjct: 3 HPGVAHESTVTLLVRHLPEAIPHDTLTRLFSHYGASSVRPCSHGRVKNCAFVDFKNE 59
>ref|XP_010650296.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
isoform X3 [Vitis vinifera]
Length = 441
Score = 87.4 bits (215), Expect = 4e-15
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +1
Query: 349 SVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAFVDFQTE 498
S ATLL+RHLPEAIPQDTL RLFS YGA +VRPC +GRLRNCAFVDF++E
Sbjct: 19 SAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLRNCAFVDFKSE 68
>ref|XP_010650295.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
isoform X2 [Vitis vinifera]
Length = 448
Score = 87.4 bits (215), Expect = 4e-15
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +1
Query: 349 SVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAFVDFQTE 498
S ATLL+RHLPEAIPQDTL RLFS YGA +VRPC +GRLRNCAFVDF++E
Sbjct: 19 SAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLRNCAFVDFKSE 68
>gb|KDO45535.1| hypothetical protein CISIN_1g043634mg, partial [Citrus sinensis]
Length = 121
Score = 87.4 bits (215), Expect = 4e-15
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Frame = +1
Query: 313 ASAPLHQG----QPPSSVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAF 480
A+AP G Q ++ TLL++HLP+AIPQDTL R+FSHYGA +VRPC+AGRLRNC F
Sbjct: 2 ATAPFDSGPQNKQETENLVTLLIKHLPDAIPQDTLSRIFSHYGASSVRPCSAGRLRNCVF 61
Query: 481 VDFQTE 498
VDF E
Sbjct: 62 VDFGNE 67
>ref|XP_002270244.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
isoform X1 [Vitis vinifera]
gi|731390245|ref|XP_010650294.1| PREDICTED: U11/U12
small nuclear ribonucleoprotein 65 kDa protein isoform
X1 [Vitis vinifera] gi|298205172|emb|CBI17231.3| unnamed
protein product [Vitis vinifera]
Length = 463
Score = 87.4 bits (215), Expect = 4e-15
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +1
Query: 349 SVATLLVRHLPEAIPQDTLFRLFSHYGACAVRPCAAGRLRNCAFVDFQTE 498
S ATLL+RHLPEAIPQDTL RLFS YGA +VRPC +GRLRNCAFVDF++E
Sbjct: 19 SAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLRNCAFVDFKSE 68