BLASTX nr result

ID: Aconitum23_contig00030232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00030232
         (328 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013694892.1| PREDICTED: uncharacterized protein LOC106398...   180   3e-43
ref|XP_013746037.1| PREDICTED: uncharacterized protein LOC106448...   177   4e-42
ref|XP_013634635.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   173   4e-41
ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448...   173   5e-41
ref|XP_010412456.1| PREDICTED: uncharacterized protein LOC104698...   157   3e-36
ref|XP_011010189.1| PREDICTED: uncharacterized protein LOC105115...   148   1e-33
gb|AAM74412.1|AC120497_12 Putative retroelement [Oryza sativa Ja...   147   2e-33
gb|AAM08860.1|AC113339_6 Putative retroelement [Oryza sativa Jap...   147   2e-33
ref|XP_008650350.1| PREDICTED: uncharacterized protein LOC103631...   147   3e-33
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   147   3e-33
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   147   3e-33
gb|ABC50100.1| gag-pol polyprotein, partial [Bambusa multiplex]       147   4e-33
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   146   5e-33
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]   146   5e-33
ref|XP_012702858.1| PREDICTED: uncharacterized protein LOC105914...   146   7e-33
ref|XP_012699070.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   146   7e-33
gb|AAX14649.1| gag-pol polyprotein, partial [Setaria pumila]          146   7e-33
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   145   9e-33
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   145   9e-33
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   145   9e-33

>ref|XP_013694892.1| PREDICTED: uncharacterized protein LOC106398939 [Brassica napus]
          Length = 1353

 Score =  180 bits (457), Expect = 3e-43
 Identities = 77/108 (71%), Positives = 94/108 (87%)
 Frame = +3

Query: 3    LRIVRELHNEGHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTP 182
            L+++RE HNEGH G+ R+ +LV  S+FWPS+RRD+ RF++RC +CQ +KG A+NAGLY P
Sbjct: 1067 LQVIREFHNEGHVGRDRTLQLVTSSYFWPSLRRDVERFIVRCGICQASKGHASNAGLYLP 1126

Query: 183  LSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            L +PSQPWTDI+MDFVLGLPRTQRG DSIFVVVDRFSKM HF+PCKKT
Sbjct: 1127 LPIPSQPWTDISMDFVLGLPRTQRGFDSIFVVVDRFSKMVHFVPCKKT 1174


>ref|XP_013746037.1| PREDICTED: uncharacterized protein LOC106448737 [Brassica napus]
            gi|923808461|ref|XP_013690050.1| PREDICTED:
            uncharacterized protein LOC106393961 [Brassica napus]
          Length = 1236

 Score =  177 bits (448), Expect = 4e-42
 Identities = 79/108 (73%), Positives = 95/108 (87%)
 Frame = +3

Query: 3    LRIVRELHNEGHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTP 182
            L+I++ELH EGH G+ R+ +LVA+S+FWP++RRD+ RFV RC  CQ  KG+A+NAGLY P
Sbjct: 1115 LQIIKELHGEGHIGRDRTLKLVAESYFWPTLRRDVERFVARCTSCQQGKGQASNAGLYLP 1174

Query: 183  LSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            L VP+QPW+DI+MDFVLGLPRTQRG DSIFVVVDRFSKMAHFIPCKKT
Sbjct: 1175 LPVPTQPWSDISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIPCKKT 1222


>ref|XP_013634635.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC106340299 [Brassica oleracea var. oleracea]
          Length = 543

 Score =  173 bits (439), Expect = 4e-41
 Identities = 77/108 (71%), Positives = 92/108 (85%)
 Frame = +3

Query: 3   LRIVRELHNEGHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTP 182
           L+I+ ELHNEGH G+ R+ +LVA+S+FWP++RRD+ RFV  C VCQ  KG+  NAGLY P
Sbjct: 53  LQIITELHNEGHVGRDRTLKLVAESYFWPTLRRDVERFVAWCTVCQQGKGQTLNAGLYMP 112

Query: 183 LSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
           L +P+QPWTD++MDFVLGLPRTQRG DSIFVVVDRFSKM HFIPCKKT
Sbjct: 113 LPIPTQPWTDLSMDFVLGLPRTQRGNDSIFVVVDRFSKMVHFIPCKKT 160


>ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448142 [Brassica napus]
          Length = 701

 Score =  173 bits (438), Expect = 5e-41
 Identities = 76/108 (70%), Positives = 91/108 (84%)
 Frame = +3

Query: 3   LRIVRELHNEGHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTP 182
           L+I++ELH EGH G+ R+ +LVA S++WPS+RRD+ RFV RC  CQ  KG  +NAGLY P
Sbjct: 337 LQIIQELHKEGHVGRDRTLKLVADSYYWPSLRRDVERFVARCTTCQEGKGHVSNAGLYLP 396

Query: 183 LSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
           L +P+QPW+DI+MDFVLGLPRTQRG DSIFVVVDRFSKM HFIPCKKT
Sbjct: 397 LPIPTQPWSDISMDFVLGLPRTQRGHDSIFVVVDRFSKMTHFIPCKKT 444


>ref|XP_010412456.1| PREDICTED: uncharacterized protein LOC104698758 [Camelina sativa]
          Length = 1103

 Score =  157 bits (397), Expect = 3e-36
 Identities = 66/108 (61%), Positives = 90/108 (83%)
 Frame = +3

Query: 3    LRIVRELHNEGHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTP 182
            L+++ ELH+EGH G+ R+ +LV+ S++WPS+RR++ R V RC  CQ+AKG  +NA LY P
Sbjct: 797  LKMIEELHSEGHVGRDRTLQLVSASYYWPSLRRNVERCVERCRACQLAKGTTSNAVLYLP 856

Query: 183  LSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            L +P++PWTD++MDF+LG+PRTQ+  DSIFVVVDRFSKMAHF+ CKKT
Sbjct: 857  LPIPTKPWTDVSMDFILGIPRTQKENDSIFVVVDRFSKMAHFVSCKKT 904


>ref|XP_011010189.1| PREDICTED: uncharacterized protein LOC105115097, partial [Populus
            euphratica]
          Length = 1282

 Score =  148 bits (374), Expect = 1e-33
 Identities = 66/109 (60%), Positives = 84/109 (77%), Gaps = 3/109 (2%)
 Frame = +3

Query: 9    IVRELHN---EGHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYT 179
            +VRE H     GH G+ +++EL+ + FFWPSM RD+H+ + RC +C+ AKG+ N  GLY 
Sbjct: 1008 LVREAHGGGLSGHFGEKKTYELLKEHFFWPSMLRDVHKVIERCAICKKAKGKENAYGLYM 1067

Query: 180  PLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            PL +P QPW D++MDFVLGL RTQRG+DSI VVVDRFSKM+HFIPC KT
Sbjct: 1068 PLPIPEQPWMDVSMDFVLGLSRTQRGKDSIMVVVDRFSKMSHFIPCNKT 1116


>gb|AAM74412.1|AC120497_12 Putative retroelement [Oryza sativa Japonica Group]
          Length = 540

 Score =  147 bits (372), Expect = 2e-33
 Identities = 71/111 (63%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3   LRIVRELHN---EGHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGL 173
           L +++E H     GH G  ++ +++A  FFWP MR+DI RFV RC  CQ AK R N  GL
Sbjct: 117 LLLIQEAHGGGLTGHFGAKKTEDVLAMHFFWPRMRKDIERFVARCTTCQKAKSRLNPHGL 176

Query: 174 YTPLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
           Y PL VPS PW DI+MDFVLGLPRT+RGRDSIFVVVDRFSKMAHFIPC K+
Sbjct: 177 YMPLPVPSIPWADISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 227


>gb|AAM08860.1|AC113339_6 Putative retroelement [Oryza sativa Japonica Group]
          Length = 411

 Score =  147 bits (372), Expect = 2e-33
 Identities = 71/111 (63%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3   LRIVRELHN---EGHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGL 173
           L +++E H     GH G  ++ +++A  FFWP MR+DI RFV RC  CQ AK R N  GL
Sbjct: 35  LLLIQEAHGGGLTGHFGAKKTEDVLAMHFFWPRMRKDIERFVARCTTCQKAKSRLNPHGL 94

Query: 174 YTPLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
           Y PL VPS PW DI+MDFVLGLPRT+RGRDSIFVVVDRFSKMAHFIPC K+
Sbjct: 95  YMPLPVPSIPWADISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 145


>ref|XP_008650350.1| PREDICTED: uncharacterized protein LOC103631140 [Zea mays]
          Length = 1175

 Score =  147 bits (371), Expect = 3e-33
 Identities = 67/98 (68%), Positives = 77/98 (78%)
 Frame = +3

Query: 33   GHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTPLSVPSQPWTD 212
            GH G  ++ +++A  FFWP MRRD+ RFV RC  CQ AK R N  GLY PL VPS PW D
Sbjct: 783  GHFGVKKTEDILASHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSAPWED 842

Query: 213  INMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            I+MDFVLGLPRT++GRDSIFV+VDRFSKMAHFIPC KT
Sbjct: 843  ISMDFVLGLPRTKKGRDSIFVIVDRFSKMAHFIPCHKT 880


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  147 bits (371), Expect = 3e-33
 Identities = 67/108 (62%), Positives = 82/108 (75%), Gaps = 3/108 (2%)
 Frame = +3

Query: 9    IVRELHNEG---HPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYT 179
            ++ ELH  G   H G+ ++  LV   FFWPS+++D+ + + +C  CQV KG   N GLYT
Sbjct: 1102 VIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQVGKGSKQNTGLYT 1161

Query: 180  PLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKK 323
            PL VPS+PW D++MDFVLGLPRTQRG DSIFVVVDRFSKMAHFIPCKK
Sbjct: 1162 PLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKK 1209


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  147 bits (371), Expect = 3e-33
 Identities = 67/108 (62%), Positives = 82/108 (75%), Gaps = 3/108 (2%)
 Frame = +3

Query: 9    IVRELHNEG---HPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYT 179
            ++ ELH  G   H G+ ++  LV   FFWPS+++D+ + + +C  CQV KG   N GLYT
Sbjct: 973  VIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQVGKGSKQNTGLYT 1032

Query: 180  PLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKK 323
            PL VPS+PW D++MDFVLGLPRTQRG DSIFVVVDRFSKMAHFIPCKK
Sbjct: 1033 PLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKK 1080


>gb|ABC50100.1| gag-pol polyprotein, partial [Bambusa multiplex]
          Length = 227

 Score =  147 bits (370), Expect = 4e-33
 Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3   LRIVRELHNEG---HPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGL 173
           L +++E H  G   H G  ++ +++A  FFWP MRRD+ RFV RC  CQ AK R N  GL
Sbjct: 10  LLLLQEAHGGGLMGHFGAKKTEDILASHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGL 69

Query: 174 YTPLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
           Y PL VPS PW DI+MDFVLGLPRT++GRDSIFVVVDRFSKMAHFIPC K+
Sbjct: 70  YMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 120


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  146 bits (369), Expect = 5e-33
 Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3    LRIVRELHNEG---HPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGL 173
            L +++E H  G   H G  ++ +++A  FFWP MRRD+ RFV RC  CQ AK R +  GL
Sbjct: 1194 LLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGL 1253

Query: 174  YTPLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            Y PL VP+ PW DI+MDFVLGLPRT+RGRDSIFVVVDRFSKMAHFIPC KT
Sbjct: 1254 YMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKT 1304



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
 Frame = +3

Query: 9    IVRELHNEG---HPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANN-AGLY 176
            I++E H      HPG  + +  + + ++W SM+R+I  FV  C VCQ  K      AGL 
Sbjct: 2017 ILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLL 2076

Query: 177  TPLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
             PL VP   W +I MDF+ GLP+TQ G DSI+VVVDR +K+A FIP K T
Sbjct: 2077 QPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTT 2126


>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
          Length = 1292

 Score =  146 bits (369), Expect = 5e-33
 Identities = 67/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
 Frame = +3

Query: 9    IVRELHNEG---HPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYT 179
            ++ ELH  G   H G+ ++  LV   FFWPS+++D+ + +  C  CQV KG   N GLYT
Sbjct: 933  VIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKXCRACQVGKGSKQNTGLYT 992

Query: 180  PLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKK 323
            PL VPS+PW D++MDFVLGLPRTQRG DSIFVVVDRFSKMAHFIPCKK
Sbjct: 993  PLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKK 1040


>ref|XP_012702858.1| PREDICTED: uncharacterized protein LOC105914754 [Setaria italica]
          Length = 1308

 Score =  146 bits (368), Expect = 7e-33
 Identities = 65/98 (66%), Positives = 77/98 (78%)
 Frame = +3

Query: 33   GHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTPLSVPSQPWTD 212
            GH G  ++  ++A  FFWP MRRD+ RF+ RC  CQ AK R N  GLY PL+VP+ PW D
Sbjct: 919  GHFGAKKTESILADHFFWPKMRRDVERFIARCTTCQKAKSRLNPHGLYMPLTVPNAPWED 978

Query: 213  INMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            I+MDFVLGLPRT++GRDS+FVVVDRFSKMAHFIPC KT
Sbjct: 979  ISMDFVLGLPRTKKGRDSVFVVVDRFSKMAHFIPCHKT 1016


>ref|XP_012699070.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105913752
            [Setaria italica]
          Length = 1366

 Score =  146 bits (368), Expect = 7e-33
 Identities = 65/98 (66%), Positives = 77/98 (78%)
 Frame = +3

Query: 33   GHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTPLSVPSQPWTD 212
            GH G  ++  ++A  FFWP MRRD+ RF+ RC  CQ AK R N  GLY PL+VP+ PW D
Sbjct: 913  GHFGAKKTESILADHFFWPKMRRDVERFIARCATCQKAKSRLNPHGLYMPLTVPNAPWED 972

Query: 213  INMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            I+MDFVLGLPRT++GRDS+FVVVDRFSKMAHFIPC KT
Sbjct: 973  ISMDFVLGLPRTKKGRDSVFVVVDRFSKMAHFIPCHKT 1010


>gb|AAX14649.1| gag-pol polyprotein, partial [Setaria pumila]
          Length = 185

 Score =  146 bits (368), Expect = 7e-33
 Identities = 69/111 (62%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3   LRIVRELHNEG---HPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGL 173
           L +++E H  G   H G  ++ +++A  FFWP MRRD+ RFV RC  CQ AK R N  GL
Sbjct: 10  LLLLQEAHGGGLMGHFGVKKTEDILAGHFFWPKMRRDVKRFVARCTTCQKAKSRLNPHGL 69

Query: 174 YTPLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
           Y PL VPS PW DI+MDFV+GLPRT++GRDS+FVVVDRFSKMAHFIPC KT
Sbjct: 70  YLPLPVPSAPWEDISMDFVMGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKT 120


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  145 bits (367), Expect = 9e-33
 Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3    LRIVRELHNEG---HPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGL 173
            L +++E H  G   H G  ++ +++A  FFWP MRRD+ RFV RC  CQ AK R N  GL
Sbjct: 1238 LLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHGL 1297

Query: 174  YTPLSVPSQPWTDINMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            Y PL VPS PW DI+MDFVLGLPRT++GRDSIFVVVDRFSKMAHFIPC K+
Sbjct: 1298 YMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1348


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 889

 Score =  145 bits (367), Expect = 9e-33
 Identities = 67/98 (68%), Positives = 77/98 (78%)
 Frame = +3

Query: 33  GHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTPLSVPSQPWTD 212
           GH G  ++ +++A  FFWP MRRD+ RFV RC  CQ AK R N  GLY PL VPS PW D
Sbjct: 548 GHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWED 607

Query: 213 INMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
           I+MDFVLGLPRT++GRDSIFVVVDRFSKMAHFIPC K+
Sbjct: 608 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 645


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  145 bits (367), Expect = 9e-33
 Identities = 67/98 (68%), Positives = 77/98 (78%)
 Frame = +3

Query: 33   GHPGKHRSFELVAQSFFWPSMRRDIHRFVLRCHVCQVAKGRANNAGLYTPLSVPSQPWTD 212
            GH G  ++ +++A  FFWP MRRD+ RFV RC  CQ AK R N  GLY PL VPS PW D
Sbjct: 1235 GHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWED 1294

Query: 213  INMDFVLGLPRTQRGRDSIFVVVDRFSKMAHFIPCKKT 326
            I+MDFVLGLPRT++GRDSIFVVVDRFSKMAHFIPC K+
Sbjct: 1295 ISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1332


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