BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00029960
         (423 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007040906.1| Tetratricopeptide repeat-like superfamily pr...    60   8e-07
ref|XP_010274574.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_011465300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    59   2e-06
ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Caps...    58   2e-06
ref|XP_010269879.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06
ref|XP_009342743.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    57   4e-06
ref|XP_008227937.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_010644689.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
ref|XP_009338802.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
emb|CBI29222.3| unnamed protein product [Vitis vinifera]               57   5e-06
ref|XP_007217153.1| hypothetical protein PRUPE_ppa001463mg [Prun...    57   5e-06
ref|XP_010439715.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06
ref|XP_010439713.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06
gb|KHG16388.1| hypothetical protein F383_21662 [Gossypium arboreum]    56   9e-06
ref|XP_010449354.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06
sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-c...    56   9e-06
gb|AHB18408.1| pentatricopeptide repeat-containing protein [Goss...    56   9e-06
emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|72687...    56   9e-06
ref|NP_567587.1| pentatricopeptide repeat-containing protein [Ar...    56   9e-06

>ref|XP_007040906.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|590680604|ref|XP_007040907.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|590680608|ref|XP_007040908.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|590680612|ref|XP_007040909.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|590680616|ref|XP_007040910.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|590680620|ref|XP_007040911.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508778151|gb|EOY25407.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508778152|gb|EOY25408.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508778153|gb|EOY25409.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508778154|gb|EOY25410.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508778155|gb|EOY25411.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508778156|gb|EOY25412.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 845

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 31/53 (58%), Positives = 37/53 (69%)
 Frame = -2

Query: 161 KLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLASQ 3
           +L  ILSK SLD ++  Q L  L+P  FDR  S+I S +NPKTTLHFF LASQ
Sbjct: 70  RLSCILSKSSLDSSKCKQLLPLLSPLDFDRFFSAISSHLNPKTTLHFFYLASQ 122


>ref|XP_010274574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
           gi|720059440|ref|XP_010274575.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
          Length = 856

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/62 (45%), Positives = 39/62 (62%)
 Frame = -2

Query: 188 PDKDRIFTAKLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLA 9
           P  D+ F  K+ SILS  SLD ++  +AL+ ++P  FD +   + SS NPKT L+FF  A
Sbjct: 50  PPYDQHFLNKVTSILSSKSLDTSKCREALSHISPHHFDHIFFELRSSTNPKTALNFFTFA 109

Query: 8   SQ 3
           SQ
Sbjct: 110 SQ 111


>ref|XP_011465300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic [Fragaria vesca subsp.
           vesca]
          Length = 800

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = -2

Query: 152 SILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLASQ 3
           S+LS PSLD ++    +  L+P QFD +  SI S+VNPKT LHFF+ ASQ
Sbjct: 61  SVLSNPSLDSSKCESLIPLLSPHQFDHLFYSIRSNVNPKTALHFFHFASQ 110


>ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Capsella rubella]
           gi|482551263|gb|EOA15456.1| hypothetical protein
           CARUB_v10004123mg [Capsella rubella]
          Length = 838

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/93 (41%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
 Frame = -2

Query: 263 YLERRRAPAPLTHLLKLHFLT-YATTPDK------DRIFTAKLLSILSKPSLDRARSTQA 105
           YL  RR  +    L    +L  Y   PDK      DR    +L S+LSK SLD     Q 
Sbjct: 35  YLFTRRLKSGRRSLHTTRYLQQYVHPPDKSEEASSDRHLHDRLSSVLSKRSLDYELCKQL 94

Query: 104 LTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLAS 6
           +T L+P +FDR+     S VNPKT L+FF LAS
Sbjct: 95  ITVLSPLEFDRLFPEFRSKVNPKTALNFFRLAS 127


>ref|XP_010269879.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
           gi|720044416|ref|XP_010269880.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
           gi|720044419|ref|XP_010269881.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
          Length = 854

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/62 (46%), Positives = 37/62 (59%)
 Frame = -2

Query: 188 PDKDRIFTAKLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLA 9
           P  DR    K+ SILS  SLD ++  + L  L+P  FDR+   +  SVNPKT L+FF  A
Sbjct: 48  PPYDRSILNKVASILSNKSLDTSKCREVLCHLSPHHFDRLFFDMRDSVNPKTALNFFTFA 107

Query: 8   SQ 3
           SQ
Sbjct: 108 SQ 109


>ref|XP_009342743.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Pyrus x
           bretschneideri]
          Length = 835

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = -2

Query: 152 SILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLASQ 3
           SILSKPSLD ++    +  L+P QFD++  SI S+VNPKT LHFF  AS+
Sbjct: 64  SILSKPSLDSSKCKALVPLLSPLQFDQLFCSISSNVNPKTALHFFYFASE 113


>ref|XP_008227937.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Prunus mume]
          Length = 834

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = -2

Query: 152 SILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLASQ 3
           SILSKPSLD ++    +  L+ ++FDRV  SI S+VNPKT LHFF  AS+
Sbjct: 63  SILSKPSLDSSKCKALIPLLSSQEFDRVFCSISSNVNPKTALHFFYFASE 112


>ref|XP_010644689.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
           gi|731382358|ref|XP_010644698.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
           gi|731382360|ref|XP_010644702.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 842

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/61 (45%), Positives = 35/61 (57%)
 Frame = -2

Query: 188 PDKDRIFTAKLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLA 9
           P  D      + SILS PSLD  +  Q +  L+P QFD V  S+  +VNPKT L+FF  A
Sbjct: 59  PSSDHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFA 118

Query: 8   S 6
           S
Sbjct: 119 S 119


>ref|XP_009338802.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Pyrus x bretschneideri]
           gi|694421948|ref|XP_009338803.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Pyrus x bretschneideri]
           gi|694421950|ref|XP_009338804.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Pyrus x bretschneideri]
          Length = 835

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/50 (54%), Positives = 36/50 (72%)
 Frame = -2

Query: 152 SILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLASQ 3
           S+LSKPSLD ++    +  L+P QFD++  SI S+VNPKT LHFF  AS+
Sbjct: 64  SVLSKPSLDSSKCKALVPLLSPLQFDQLFRSISSNVNPKTALHFFYFASE 113


>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/61 (45%), Positives = 35/61 (57%)
 Frame = -2

Query: 188 PDKDRIFTAKLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLA 9
           P  D      + SILS PSLD  +  Q +  L+P QFD V  S+  +VNPKT L+FF  A
Sbjct: 43  PSSDHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFA 102

Query: 8   S 6
           S
Sbjct: 103 S 103


>ref|XP_007217153.1| hypothetical protein PRUPE_ppa001463mg [Prunus persica]
           gi|462413303|gb|EMJ18352.1| hypothetical protein
           PRUPE_ppa001463mg [Prunus persica]
          Length = 821

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -2

Query: 152 SILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLASQ 3
           SILSKPSLD ++    +  L+  +FDRV  SI S+VNPKT LHFF  AS+
Sbjct: 59  SILSKPSLDSSKCKALIPLLSSHEFDRVFCSISSNVNPKTALHFFYFASE 108


>ref|XP_010439715.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X2 [Camelina sativa]
          Length = 840

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
 Frame = -2

Query: 263 YLERRRAPAPLTHLLKLHFLT-YATTPDKDRIFTA-------KLLSILSKPSLDRARSTQ 108
           YL  RR  +P        +L  Y   PDK    ++       +L S+LSK SLD  +  Q
Sbjct: 36  YLFTRRLKSPKRSFHTTRYLQQYVHPPDKSEDPSSDRQHLHQRLSSVLSKRSLDYEQCKQ 95

Query: 107 ALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLAS 6
            +T L+P +FDR+     S VNPKT L FF LAS
Sbjct: 96  LITVLSPLEFDRLFPEFRSKVNPKTALDFFRLAS 129


>ref|XP_010439713.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X1 [Camelina sativa]
           gi|727529114|ref|XP_010439714.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X1 [Camelina sativa]
          Length = 840

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
 Frame = -2

Query: 263 YLERRRAPAPLTHLLKLHFLT-YATTPDKDRIFTA-------KLLSILSKPSLDRARSTQ 108
           YL  RR  +P        +L  Y   PDK    ++       +L S+LSK SLD  +  Q
Sbjct: 36  YLFTRRLKSPKRSFHTTRYLQQYVHPPDKSEDPSSDRQHLHQRLSSVLSKRSLDYEQCKQ 95

Query: 107 ALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLAS 6
            +T L+P +FDR+     S VNPKT L FF LAS
Sbjct: 96  LITVLSPLEFDRLFPEFRSKVNPKTALDFFRLAS 129


>gb|KHG16388.1| hypothetical protein F383_21662 [Gossypium arboreum]
          Length = 794

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 29/65 (44%), Positives = 42/65 (64%)
 Frame = -2

Query: 197 ATTPDKDRIFTAKLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFF 18
           ++ P  ++     L SILSKPSLD ++S Q L  L+P  FDR   ++    +PKTTL+FF
Sbjct: 47  SSPPPVNQSLLDALSSILSKPSLDSSKSKQLLPLLSPADFDRFFIALSPRADPKTTLNFF 106

Query: 17  NLASQ 3
           +LAS+
Sbjct: 107 HLASR 111


>ref|XP_010449354.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Camelina sativa]
           gi|727554224|ref|XP_010449355.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Camelina sativa]
          Length = 840

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
 Frame = -2

Query: 308 SPMPTTNSL*SIMIPYLERRRAPAPLTHLLKLHFLTYATTPDKDRIFTA-------KLLS 150
           SPM     L      +  R ++P    H  + +   Y   PDK    ++       +L S
Sbjct: 23  SPMDLRRRLSRATYFFTRRLKSPKRSFHTTR-YLQQYVHPPDKSEDPSSDRQHLHQRLSS 81

Query: 149 ILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFFNLAS 6
           +LSK SLD  +  Q +T L+P +FDR+     S VNPKT L FF LAS
Sbjct: 82  VLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLAS 129


>sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
 Frame = -2

Query: 188 PDK------DRIFTAKLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTL 27
           PDK      DR    +L S+LSK SLD  +  Q +T L+P +FDR+     S VNPKT L
Sbjct: 64  PDKSEETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTAL 123

Query: 26  HFFNLAS 6
            FF LAS
Sbjct: 124 DFFRLAS 130


>gb|AHB18408.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 846

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 29/65 (44%), Positives = 42/65 (64%)
 Frame = -2

Query: 197 ATTPDKDRIFTAKLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTLHFF 18
           ++ P  ++     L SILSKPSLD ++S Q L  L+P  FDR   ++    +PKTTL+FF
Sbjct: 70  SSPPPVNQSLLDTLSSILSKPSLDSSKSKQLLPLLSPSDFDRFFIALSPRADPKTTLNFF 129

Query: 17  NLASQ 3
           +LAS+
Sbjct: 130 HLASR 134


>emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|7268739|emb|CAB78946.1|
           putative protein [Arabidopsis thaliana]
          Length = 814

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
 Frame = -2

Query: 188 PDK------DRIFTAKLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTL 27
           PDK      DR    +L S+LSK SLD  +  Q +T L+P +FDR+     S VNPKT L
Sbjct: 40  PDKSEETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTAL 99

Query: 26  HFFNLAS 6
            FF LAS
Sbjct: 100 DFFRLAS 106


>ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334186696|ref|NP_001190771.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis
           thaliana] gi|332658782|gb|AEE84182.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332658783|gb|AEE84183.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
 Frame = -2

Query: 188 PDK------DRIFTAKLLSILSKPSLDRARSTQALTSLTPRQFDRVLSSIHSSVNPKTTL 27
           PDK      DR    +L S+LSK SLD  +  Q +T L+P +FDR+     S VNPKT L
Sbjct: 51  PDKSEETSSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTAL 110

Query: 26  HFFNLAS 6
            FF LAS
Sbjct: 111 DFFRLAS 117