BLASTX nr result
ID: Aconitum23_contig00029271
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00029271
(318 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila] 81 3e-13
ref|XP_006292441.1| hypothetical protein CARUB_v10018659mg [Caps... 81 3e-13
ref|XP_006401381.1| hypothetical protein EUTSA_v10013799mg [Eutr... 78 2e-12
ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyr... 78 2e-12
ref|XP_013666882.1| PREDICTED: cold shock domain-containing prot... 78 3e-12
ref|XP_013666881.1| PREDICTED: DNA-binding protein HEXBP-like is... 78 3e-12
ref|XP_009120119.1| PREDICTED: DNA-binding protein HEXBP [Brassi... 78 3e-12
ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis tha... 78 3e-12
emb|CDY17384.1| BnaA10g10180D [Brassica napus] 77 5e-12
gb|KFK40133.1| hypothetical protein AALP_AA3G335000 [Arabis alpina] 77 5e-12
ref|XP_013675650.1| PREDICTED: cold shock protein 1-like [Brassi... 76 9e-12
ref|XP_013607174.1| PREDICTED: DNA-binding protein HEXBP [Brassi... 75 2e-11
emb|CDP16752.1| unnamed protein product [Coffea canephora] 75 2e-11
emb|CDP16751.1| unnamed protein product [Coffea canephora] 75 2e-11
ref|XP_010535814.1| PREDICTED: DNA topoisomerase 3-alpha [Tarena... 74 4e-11
ref|XP_004147743.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 72 2e-10
ref|XP_012067382.1| PREDICTED: uncharacterized protein LOC105630... 70 5e-10
ref|XP_012067381.1| PREDICTED: uncharacterized protein LOC105630... 70 5e-10
gb|KDP41875.1| hypothetical protein JCGZ_26893 [Jatropha curcas] 70 5e-10
ref|XP_010112874.1| DNA topoisomerase 3-alpha [Morus notabilis] ... 70 8e-10
>gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
Length = 369
Score = 81.3 bits (199), Expect = 3e-13
Identities = 44/106 (41%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CG GLC + TS+++ NPGR F CPNR N GCG +QW D V+
Sbjct: 92 CPCGVGLCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTTHSYGNTNDSK 151
Query: 191 ----LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG+CR+ KT NVGR Y CP V CGF
Sbjct: 152 FPDHQCPCGAGLCRVLTAKTGE---NVGRQFYRCP---VFEGSCGF 191
>ref|XP_006292441.1| hypothetical protein CARUB_v10018659mg [Capsella rubella]
gi|482561148|gb|EOA25339.1| hypothetical protein
CARUB_v10018659mg [Capsella rubella]
Length = 433
Score = 80.9 bits (198), Expect = 3e-13
Identities = 44/106 (41%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CG GLC + TS+++ NPGR F CPNR N GCG +QW D V+
Sbjct: 95 CPCGVGLCLVLTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTSHSYGNNNDSK 154
Query: 191 ----LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG+CR+ KT NVGR Y CP V CGF
Sbjct: 155 FPDHQCPCGAGLCRVLTAKTGE---NVGRQFYRCP---VFEGSCGF 194
>ref|XP_006401381.1| hypothetical protein EUTSA_v10013799mg [Eutrema salsugineum]
gi|557102471|gb|ESQ42834.1| hypothetical protein
EUTSA_v10013799mg [Eutrema salsugineum]
Length = 384
Score = 78.2 bits (191), Expect = 2e-12
Identities = 42/110 (38%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CG G+C + TS+++ NPGR F CPNR N GCG +QW D V+
Sbjct: 103 CPCGVGVCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTQPGTHHSYGNT 162
Query: 191 --------LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG+CR+ KT N+GR Y CP V CGF
Sbjct: 163 NESKFPDHQCPCGAGLCRVLTAKTGE---NIGRQFYRCP---VFEGSCGF 206
>ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
gi|297321433|gb|EFH51854.1| zinc knuckle family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 78.2 bits (191), Expect = 2e-12
Identities = 44/107 (41%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CG GLC + TS + NPGR F CPNR N GCG +QW D V+
Sbjct: 95 CPCGVGLCLVLTSTTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTTTHSYGNTNDS 154
Query: 191 -----LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG+CR+ KT NVGR Y CP V CGF
Sbjct: 155 KFPDHQCPCGAGLCRVLTAKTGE---NVGRQFYRCP---VFEGSCGF 195
>ref|XP_013666882.1| PREDICTED: cold shock domain-containing protein 3-like isoform X2
[Brassica napus]
Length = 379
Score = 77.8 bits (190), Expect = 3e-12
Identities = 42/107 (39%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CGAG+C++ TS+++ NPGR F CPNR N GCG +QW D V+
Sbjct: 98 CPCGAGVCSILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTQPGSYGNTNES 157
Query: 191 -----LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG R+ KT N+GR Y CP V CGF
Sbjct: 158 KFPDLQCPCGAGFSRVLTAKTGE---NIGRQFYRCP---VFEGSCGF 198
>ref|XP_013666881.1| PREDICTED: DNA-binding protein HEXBP-like isoform X1 [Brassica
napus]
Length = 415
Score = 77.8 bits (190), Expect = 3e-12
Identities = 42/107 (39%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CGAG+C++ TS+++ NPGR F CPNR N GCG +QW D V+
Sbjct: 98 CPCGAGVCSILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTQPGSYGNTNES 157
Query: 191 -----LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG R+ KT N+GR Y CP V CGF
Sbjct: 158 KFPDLQCPCGAGFSRVLTAKTGE---NIGRQFYRCP---VFEGSCGF 198
>ref|XP_009120119.1| PREDICTED: DNA-binding protein HEXBP [Brassica rapa]
Length = 415
Score = 77.8 bits (190), Expect = 3e-12
Identities = 42/107 (39%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CGAG+C++ TS+++ NPGR F CPNR N GCG +QW D V+
Sbjct: 98 CPCGAGVCSILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTQPGSYGNTNES 157
Query: 191 -----LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG R+ KT N+GR Y CP V CGF
Sbjct: 158 KFPDLQCPCGAGFSRVLTAKTGE---NIGRQFYRCP---VFEGSCGF 198
>ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|7529257|emb|CAB86673.1| putative protein [Arabidopsis
thaliana] gi|17529084|gb|AAL38752.1| unknown protein
[Arabidopsis thaliana] gi|22136980|gb|AAM91719.1|
unknown protein [Arabidopsis thaliana]
gi|332644235|gb|AEE77756.1| CCHC-type zinc knuckle
protein [Arabidopsis thaliana]
Length = 372
Score = 77.8 bits (190), Expect = 3e-12
Identities = 43/110 (39%), Positives = 51/110 (46%), Gaps = 23/110 (20%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CG G+C + TS++ NPGR F CPNR N GCG +QW D V+
Sbjct: 96 CPCGVGICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTSTTTSNSYGNG 155
Query: 191 --------LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG+CR+ KT NVGR Y CP V CGF
Sbjct: 156 NDTKFPDHQCPCGAGLCRVLTAKTGE---NVGRQFYRCP---VFEGSCGF 199
>emb|CDY17384.1| BnaA10g10180D [Brassica napus]
Length = 244
Score = 77.0 bits (188), Expect = 5e-12
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 20/101 (19%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CGAG+C++ TS+++ NPGR F CPNR N GCG++QW D V+
Sbjct: 98 CPCGAGVCSILTSNTQKNPGRKFYKCPNREENGGCGVFQWCDAVQSSGTQPGSYGNTNES 157
Query: 191 -----LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQ 298
C C AG R+ KT N+GR Y CP V+
Sbjct: 158 KFPDLQCPCGAGFSRVLTAKTGE---NIGRQFYRCPVFEVE 195
>gb|KFK40133.1| hypothetical protein AALP_AA3G335000 [Arabis alpina]
Length = 414
Score = 77.0 bits (188), Expect = 5e-12
Identities = 42/105 (40%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CG+G+C + TS+++ NPGR F CPN+ N GCG +QW D V+
Sbjct: 99 CSCGSGVCLILTSNTQKNPGRKFYKCPNKEDNGGCGFFQWCDAVQSSGTQSYGNTNDSKF 158
Query: 191 ---LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG+ RI KT NVGR Y CP V CGF
Sbjct: 159 PELQCPCGAGLSRILTAKTGE---NVGRQFYRCP---VFEGSCGF 197
>ref|XP_013675650.1| PREDICTED: cold shock protein 1-like [Brassica napus]
gi|674875081|emb|CDY57965.1| BnaCnng32640D [Brassica
napus]
Length = 377
Score = 76.3 bits (186), Expect = 9e-12
Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CG G+C++ TS+++ NPGR F CPNR N GCG +QW D V+
Sbjct: 99 CPCGNGVCSILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTQPGSYGNTNES 158
Query: 191 -----LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG+ R+ KT N+GR Y CP V CGF
Sbjct: 159 KFPDLQCPCGAGLSRVLTAKTGE---NIGRQFYRCP---VFEGSCGF 199
>ref|XP_013607174.1| PREDICTED: DNA-binding protein HEXBP [Brassica oleracea var.
oleracea]
Length = 377
Score = 75.1 bits (183), Expect = 2e-11
Identities = 41/107 (38%), Positives = 51/107 (47%), Gaps = 20/107 (18%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CG G+C++ TS+++ NPGR F CPNR N GCG +QW D V
Sbjct: 99 CPCGNGVCSILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVHSSGTQPGSYGNTNES 158
Query: 191 -----LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C AG+ R+ KT N+GR Y CP V CGF
Sbjct: 159 NFPDLQCPCGAGMSRVLTAKTGE---NIGRQFYRCP---VFEGSCGF 199
>emb|CDP16752.1| unnamed protein product [Coffea canephora]
Length = 553
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Frame = +2
Query: 11 SSKRMATNNDQQMYYCLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK 190
+S+RM +++ + C+CGAG+C L TS S++NPGR + CP N GCG ++W D+V+
Sbjct: 9 TSRRMTSSSGSVL--CVCGAGVCLLLTSKSQANPGRSYYRCP--ASNRGCGFFRWLDQVR 64
Query: 191 ---------LCQCKAGICRIQRCKTSNTLTNVGRWSYTCP 283
C C AGICR+ KT+ T N GR + CP
Sbjct: 65 PDQLIFNIPQCGCGAGICRLD-IKTT-TGPNAGRKCFVCP 102
>emb|CDP16751.1| unnamed protein product [Coffea canephora]
Length = 129
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Frame = +2
Query: 11 SSKRMATNNDQQMYYCLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK 190
+S+RM +++ + C+CGAG+C L TS S++NPGR + CP N GCG ++W D+V+
Sbjct: 9 TSRRMTSSSGSVL--CVCGAGVCLLLTSKSQANPGRSYYRCP--ASNRGCGFFRWLDQVR 64
Query: 191 ---------LCQCKAGICRIQRCKTSNTLTNVGRWSYTCP 283
C C AGICR+ KT+ T N GR + CP
Sbjct: 65 PDQLIFNIPQCGCGAGICRLD-IKTT-TGPNAGRKCFVCP 102
>ref|XP_010535814.1| PREDICTED: DNA topoisomerase 3-alpha [Tarenaya hassleriana]
gi|729328398|ref|XP_010535815.1| PREDICTED: DNA
topoisomerase 3-alpha [Tarenaya hassleriana]
Length = 329
Score = 73.9 bits (180), Expect = 4e-11
Identities = 40/109 (36%), Positives = 49/109 (44%), Gaps = 22/109 (20%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVK--------------- 190
C CG G+C + TS+++ NPGR F CP R N GCG +QW DE +
Sbjct: 120 CTCGVGICLILTSNTQKNPGRKFYKCPVREENGGCGFFQWCDEDRSSGTHAGTHSYANSN 179
Query: 191 -------LCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
C C +G CRI KT N+GR Y CP CGF
Sbjct: 180 DSKFPDHQCPCGSGSCRILTAKTGQ---NIGRQFYRCPAFEA---SCGF 222
>ref|XP_004147743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
gi|700198347|gb|KGN53505.1| hypothetical protein
Csa_4G062410 [Cucumis sativus]
Length = 327
Score = 71.6 bits (174), Expect = 2e-10
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEVKL-------------- 193
C CG+G+C++ T+++E N GR F CP R N GCG ++W D +
Sbjct: 129 CPCGSGICSVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDSASVANVVSYGSQNPLSS 188
Query: 194 ------CQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVK 304
C C AG C+I KT N NVG+ Y CP S +
Sbjct: 189 SFSDLQCPCGAGSCKILTAKTGN---NVGKQFYCCPSSQASCR 228
>ref|XP_012067382.1| PREDICTED: uncharacterized protein LOC105630230 isoform X2
[Jatropha curcas]
Length = 603
Score = 70.5 bits (171), Expect = 5e-10
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +2
Query: 2 SVRSSKRMATNNDQQMYYCLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHD 181
++ SS D + C CG G C +FTSH+++NP R F TCP + CG ++W D
Sbjct: 68 NLTSSSSSLNTCDVLLIRCPCGRGKCRIFTSHTQANPERKFYTCPVDKSSGSCGFFKWCD 127
Query: 182 EVK----LCQCKAGICRIQRCKTSNTLTNVGRWSYTC 280
E+ +C C AG C + R TS +W + C
Sbjct: 128 ELSITPPICPCGAGFCSLNRDSTS---PYEEKWYFAC 161
>ref|XP_012067381.1| PREDICTED: uncharacterized protein LOC105630230 isoform X1
[Jatropha curcas]
Length = 610
Score = 70.5 bits (171), Expect = 5e-10
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +2
Query: 2 SVRSSKRMATNNDQQMYYCLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHD 181
++ SS D + C CG G C +FTSH+++NP R F TCP + CG ++W D
Sbjct: 68 NLTSSSSSLNTCDVLLIRCPCGRGKCRIFTSHTQANPERKFYTCPVDKSSGSCGFFKWCD 127
Query: 182 EVK----LCQCKAGICRIQRCKTSNTLTNVGRWSYTC 280
E+ +C C AG C + R TS +W + C
Sbjct: 128 ELSITPPICPCGAGFCSLNRDSTS---PYEEKWYFAC 161
>gb|KDP41875.1| hypothetical protein JCGZ_26893 [Jatropha curcas]
Length = 609
Score = 70.5 bits (171), Expect = 5e-10
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +2
Query: 2 SVRSSKRMATNNDQQMYYCLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHD 181
++ SS D + C CG G C +FTSH+++NP R F TCP + CG ++W D
Sbjct: 67 NLTSSSSSLNTCDVLLIRCPCGRGKCRIFTSHTQANPERKFYTCPVDKSSGSCGFFKWCD 126
Query: 182 EVK----LCQCKAGICRIQRCKTSNTLTNVGRWSYTC 280
E+ +C C AG C + R TS +W + C
Sbjct: 127 ELSITPPICPCGAGFCSLNRDSTS---PYEEKWYFAC 160
>ref|XP_010112874.1| DNA topoisomerase 3-alpha [Morus notabilis]
gi|587948770|gb|EXC35009.1| DNA topoisomerase 3-alpha
[Morus notabilis]
Length = 342
Score = 69.7 bits (169), Expect = 8e-10
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Frame = +2
Query: 56 CLCGAGLCNLFTSHSESNPGRLFITCPNRFGNNGCGLWQWHDEV---------------- 187
C CG G+C + T+++E N GR F CP R N GCG ++W D
Sbjct: 152 CPCGLGICTVLTANTEKNRGRKFYKCPLRQENGGCGFFEWCDNASGNNSMAGGNYTSDSS 211
Query: 188 ---KLCQCKAGICRIQRCKTSNTLTNVGRWSYTCPRSSVQVKGCGF 316
+ C C AG+C I KT N+G+ Y CP + Q CGF
Sbjct: 212 FPGRPCPCGAGLCLILTAKTGQ---NIGQQFYRCPAN--QGSSCGF 252