BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00024873
         (2314 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010272357.1| PREDICTED: pentatricopeptide repeat-containi...   674   0.0  
ref|XP_010651016.1| PREDICTED: pentatricopeptide repeat-containi...   648   0.0  
emb|CBI16128.3| unnamed protein product [Vitis vinifera]              648   0.0  
emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]   636   e-179
ref|XP_007016407.1| Pentatricopeptide repeat (PPR-like) superfam...   630   e-177
ref|XP_012471332.1| PREDICTED: pentatricopeptide repeat-containi...   625   e-176
ref|XP_008223610.1| PREDICTED: pentatricopeptide repeat-containi...   614   e-173
ref|XP_012471331.1| PREDICTED: pentatricopeptide repeat-containi...   609   e-171
ref|XP_012471330.1| PREDICTED: pentatricopeptide repeat-containi...   609   e-171
ref|XP_008357226.1| PREDICTED: pentatricopeptide repeat-containi...   603   e-169
ref|XP_009364397.1| PREDICTED: pentatricopeptide repeat-containi...   598   e-168
ref|XP_012075956.1| PREDICTED: pentatricopeptide repeat-containi...   591   e-166
ref|XP_006372552.1| hypothetical protein POPTR_0017s02730g [Popu...   581   e-162
ref|XP_004294524.1| PREDICTED: pentatricopeptide repeat-containi...   580   e-162
ref|XP_010523333.1| PREDICTED: pentatricopeptide repeat-containi...   578   e-162
ref|XP_006488331.1| PREDICTED: pentatricopeptide repeat-containi...   577   e-161
gb|KDO72846.1| hypothetical protein CISIN_1g043999mg [Citrus sin...   577   e-161
ref|XP_002872610.1| pentatricopeptide repeat-containing protein ...   576   e-161
ref|XP_011001547.1| PREDICTED: pentatricopeptide repeat-containi...   575   e-161
gb|KRH50360.1| hypothetical protein GLYMA_07G217200 [Glycine max]     575   e-161

>ref|XP_010272357.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            [Nelumbo nucifera]
          Length = 566

 Score =  674 bits (1740), Expect = 0.0
 Identities = 343/566 (60%), Positives = 415/566 (73%), Gaps = 2/566 (0%)
 Frame = -1

Query: 2161 MSQTQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSL 1982
            MSQ     NL+QKMVKSPPLKAFS+FN S L GFQ T EST+ IL++L+SSNML +AQS+
Sbjct: 1    MSQIHQAFNLIQKMVKSPPLKAFSIFNESILQGFQHTNESTSAILHLLLSSNMLAQAQSV 60

Query: 1981 LLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLV--YEALINAYIQSRKPQEALFY 1808
            LL+ +                               L+  YEA+I A IQS+  QE+LFY
Sbjct: 61   LLRFLSGKLYSSSFTSSSLPSLLHHFTQTHSGPNSLLILLYEAIIGALIQSQMLQESLFY 120

Query: 1807 ANEMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEV 1628
              EM+N+GL P                 FE A C FNE +    LD YS+GIMIKGCC+V
Sbjct: 121  FTEMLNRGLVPSPSTFNNLLTHLLKLDSFENACCVFNETQGRTQLDIYSYGIMIKGCCQV 180

Query: 1627 GDLIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTY 1448
            GDL KGFELL+Q+EKM     VV YTTLIDGCCKNG+ ++A+KLFSKM  +GLV NEFTY
Sbjct: 181  GDLSKGFELLSQLEKMGWSANVVIYTTLIDGCCKNGDIDQARKLFSKMEKLGLVANEFTY 240

Query: 1447 TAMINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRV 1268
            T MING F++G  +EG ELYEEMKL+G  PNIYTYNS+I  YC++GNL KAFELF EM  
Sbjct: 241  TTMINGCFRKGFNKEGFELYEEMKLKGTLPNIYTYNSVISGYCKDGNLKKAFELFDEMHE 300

Query: 1267 KGVARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDK 1088
            +GVA NVVT+NTLI GLCR RKP+EAEK+V RMK+ GLSPNSITY+ L+DGFCK  KLDK
Sbjct: 301  RGVACNVVTYNTLISGLCRVRKPVEAEKLVSRMKEAGLSPNSITYNTLIDGFCKARKLDK 360

Query: 1087 ALSLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILID 908
            A  LF +M+ +GQ+ SLVTYN+LI GFSR G  E AA   +EMEER I PSK+TY+ILID
Sbjct: 361  ASILFDKMRSTGQSPSLVTYNVLIAGFSRIGNFETAAFLAREMEERDIFPSKVTYSILID 420

Query: 907  TFVRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKP 728
              ++S NMEKA E+ SSMEKAG++ D Y+YG+LI+G C+ GNMKDA KLFR MSE  LKP
Sbjct: 421  ALIKSDNMEKALEMFSSMEKAGLMADAYIYGILINGFCVKGNMKDASKLFRSMSEVHLKP 480

Query: 727  NDVIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLL 548
            ND+IYN MIYGYCK+G+SYRALRLL++M +NGM+PN+ASY LTI  LCKDGK  EA+ LL
Sbjct: 481  NDIIYNIMIYGYCKEGNSYRALRLLEKMHDNGMLPNMASYSLTIGILCKDGKWQEAEVLL 540

Query: 547  NEMVESGMNPSDSIYSTISKAKHEDS 470
            NEMV  G++P DS+YS+I+KAK E+S
Sbjct: 541  NEMVGLGLSPCDSLYSSIAKAKLENS 566


>ref|XP_010651016.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            [Vitis vinifera]
          Length = 581

 Score =  648 bits (1672), Expect = 0.0
 Identities = 327/563 (58%), Positives = 408/563 (72%)
 Frame = -1

Query: 2161 MSQTQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSL 1982
            M+QTQ    L+ KMVKSPPLKA SLF SS L GFQ T +S + IL++L+SSN+   +QSL
Sbjct: 1    MAQTQQALILLPKMVKSPPLKALSLFTSSALQGFQHTHQSISFILHLLISSNLFSHSQSL 60

Query: 1981 LLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYAN 1802
            LL+LI                                ++EA+INA+++S+ P++ALFY N
Sbjct: 61   LLKLISGQISSSSFTPSSLFHELTQPHLDSFPTHVL-IHEAIINAHVRSQLPEQALFYFN 119

Query: 1801 EMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGD 1622
            +M+ +GL P                 FEKAW  FNE K  V LD YSFGIMIKGCCEVG 
Sbjct: 120  QMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGY 179

Query: 1621 LIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTA 1442
            L KGFE+L QME+M L P VV YTTLIDGCCKNG+    K+LF KMG + +V N++TYT 
Sbjct: 180  LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 239

Query: 1441 MINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKG 1262
            +ING+FK GLK++G+ELYE+MKL G+ PN+YTYNS+I   C +G L  AFELF EMR +G
Sbjct: 240  LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 299

Query: 1261 VARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKAL 1082
            VA NVVT+NTLIGGLC+ER+ LEAE+++ RMK+ GLSPN I+Y+ L+DG+C +G LDKA 
Sbjct: 300  VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 359

Query: 1081 SLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTF 902
            SLF QMK SGQ+ SL TYNILI GFS A         V+EME RG+ PSK+TYTIL+D  
Sbjct: 360  SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 419

Query: 901  VRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPND 722
            VRS N+EKAF+++SSMEKAG++ D+Y+YGVLIHGLC+ G+MK+A KLF+ + E  LKPND
Sbjct: 420  VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPND 479

Query: 721  VIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNE 542
            VIYNTMIYGYCK+GSSYRALRLLKEM ENGMVPNVASY  TI  LCKD K  EA+ LL +
Sbjct: 480  VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKD 539

Query: 541  MVESGMNPSDSIYSTISKAKHED 473
            M+E G+ PS SI++ ISKA+ ++
Sbjct: 540  MIELGLKPSISIWNMISKARFDN 562


>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  648 bits (1672), Expect = 0.0
 Identities = 327/563 (58%), Positives = 408/563 (72%)
 Frame = -1

Query: 2161 MSQTQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSL 1982
            M+QTQ    L+ KMVKSPPLKA SLF SS L GFQ T +S + IL++L+SSN+   +QSL
Sbjct: 1    MAQTQQALILLPKMVKSPPLKALSLFTSSALQGFQHTHQSISFILHLLISSNLFSHSQSL 60

Query: 1981 LLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYAN 1802
            LL+LI                                ++EA+INA+++S+ P++ALFY N
Sbjct: 61   LLKLISGQISSSSFTPSSLFHELTQPHLDSFPTHVL-IHEAIINAHVRSQLPEQALFYFN 119

Query: 1801 EMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGD 1622
            +M+ +GL P                 FEKAW  FNE K  V LD YSFGIMIKGCCEVG 
Sbjct: 120  QMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGY 179

Query: 1621 LIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTA 1442
            L KGFE+L QME+M L P VV YTTLIDGCCKNG+    K+LF KMG + +V N++TYT 
Sbjct: 180  LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 239

Query: 1441 MINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKG 1262
            +ING+FK GLK++G+ELYE+MKL G+ PN+YTYNS+I   C +G L  AFELF EMR +G
Sbjct: 240  LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 299

Query: 1261 VARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKAL 1082
            VA NVVT+NTLIGGLC+ER+ LEAE+++ RMK+ GLSPN I+Y+ L+DG+C +G LDKA 
Sbjct: 300  VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 359

Query: 1081 SLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTF 902
            SLF QMK SGQ+ SL TYNILI GFS A         V+EME RG+ PSK+TYTIL+D  
Sbjct: 360  SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 419

Query: 901  VRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPND 722
            VRS N+EKAF+++SSMEKAG++ D+Y+YGVLIHGLC+ G+MK+A KLF+ + E  LKPND
Sbjct: 420  VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPND 479

Query: 721  VIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNE 542
            VIYNTMIYGYCK+GSSYRALRLLKEM ENGMVPNVASY  TI  LCKD K  EA+ LL +
Sbjct: 480  VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKD 539

Query: 541  MVESGMNPSDSIYSTISKAKHED 473
            M+E G+ PS SI++ ISKA+ ++
Sbjct: 540  MIELGLKPSISIWNMISKARFDN 562


>emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  636 bits (1640), Expect = e-179
 Identities = 320/550 (58%), Positives = 399/550 (72%)
 Frame = -1

Query: 2122 MVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLLLQLIXXXXXXXX 1943
            MVKSPPLKA SLF SS L G Q T +S + IL++L+SSN+   +QSLLL+LI        
Sbjct: 1    MVKSPPLKALSLFTSSALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSS 60

Query: 1942 XXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYANEMVNKGLTPRXXX 1763
                                    ++EA+INA+++S+ P++ALFY N+M+ +GL P    
Sbjct: 61   FTPSSLFHELTQPHLDSFPTHVL-IHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNT 119

Query: 1762 XXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIKGFELLAQMEK 1583
                         FEKAW  FNE K  V LD YSFGIMIKGCCEVG L KGFE+L QME+
Sbjct: 120  FNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEE 179

Query: 1582 MDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMINGYFKEGLKRE 1403
            M L P VV YTTLIDGCCKNG+    K+LF KMG + +V N++TYT +ING+FK GLK++
Sbjct: 180  MGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKD 239

Query: 1402 GLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVTFNTLIG 1223
            G+ELYE+MKL G+ PN+YTYNS+I   C +G L  AFELF EMR +GVA NVVT+NTLIG
Sbjct: 240  GIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIG 299

Query: 1222 GLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMKESGQTA 1043
            GLC+ER+ LEAE+++ RMK+ GLSPN I+Y+ L+DG+C +G LDKA SLF QMK SGQ+ 
Sbjct: 300  GLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSP 359

Query: 1042 SLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEKAFELH 863
            SL TYNILI GFS A         V+EME RG+ PSK+TYTIL+D  VRS N+EKAF+++
Sbjct: 360  SLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 419

Query: 862  SSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIYGYCKQ 683
            SSMEKAG++ D+Y+YGVLIHGLC+ G+MK+A KLF+ + E  LKPNDVIYNTMIYGYCK+
Sbjct: 420  SSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKE 479

Query: 682  GSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMNPSDSIY 503
            GSSYRALRLLKEM ENGMVPNVASY  TI  LCKD K  EA+ LL +M+E G+ PS SI+
Sbjct: 480  GSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIW 539

Query: 502  STISKAKHED 473
            + ISKA+ ++
Sbjct: 540  NMISKARFDN 549


>ref|XP_007016407.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
            isoform 1 [Theobroma cacao] gi|508786770|gb|EOY34026.1|
            Pentatricopeptide repeat (PPR-like) superfamily protein,
            putative isoform 1 [Theobroma cacao]
          Length = 563

 Score =  630 bits (1624), Expect = e-177
 Identities = 321/561 (57%), Positives = 399/561 (71%)
 Frame = -1

Query: 2161 MSQTQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSL 1982
            M QT     L+ KMVK+PPLKA SLFNSS L G Q T ES    L+IL+SSNML+ +QS+
Sbjct: 1    MLQTPQTLVLILKMVKNPPLKALSLFNSSILQGLQHTPESMAFTLDILLSSNMLLHSQSI 60

Query: 1981 LLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYAN 1802
            +LQ+I                               L+YE++INA++QS+ P +A++Y N
Sbjct: 61   ILQIISGRILSPFFTSLSLFQHLTQPNLYPNSMNQTLLYESIINAHVQSQLPDQAIYYFN 120

Query: 1801 EMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGD 1622
            +MV++ L                   F+KAW  F + K  V LD YSFGIMIKGCCE GD
Sbjct: 121  QMVDRNLVLGPNTLNNILSFLIKFDSFDKAWMLFTKSKGRVKLDVYSFGIMIKGCCEAGD 180

Query: 1621 LIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTA 1442
            L K FELL Q+E++ L P VV YTTLIDGCCKNG+F +AK LF +M  +GLVPNE+TYT 
Sbjct: 181  LSKSFELLGQVEELGLSPNVVLYTTLIDGCCKNGDFEQAKMLFCRMEELGLVPNEYTYTV 240

Query: 1441 MINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKG 1262
            +ING+FK+GLK++G  LYE+M+L GV PN+YTYN ++ EYC  G ++KAFE+FGEMR +G
Sbjct: 241  LINGFFKKGLKKDGFLLYEKMQLNGVIPNLYTYNCVMTEYCSEGKVSKAFEMFGEMRERG 300

Query: 1261 VARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKAL 1082
            VA NVVT+N LIGGLCRE K  +AEK+V +M + G+SPN ITY+ L+DGFC VGKL+KA+
Sbjct: 301  VACNVVTYNILIGGLCRETKVWDAEKLVDQMTRAGISPNLITYNSLIDGFCNVGKLEKAM 360

Query: 1081 SLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTF 902
             LF Q+K  GQ+ SLVTYNILI GFSRA      A  VKEMEERGI PSK+T+TI+I  F
Sbjct: 361  YLFNQLKTKGQSPSLVTYNILISGFSRARDSAAVAGLVKEMEERGIRPSKVTHTIVIHAF 420

Query: 901  VRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPND 722
            +RS N E+A EL+  M+KAG++ DVY +GVLIHGLC  GNMK+A KL + M E +LKPND
Sbjct: 421  IRSENTERAVELYLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSMDEMQLKPND 480

Query: 721  VIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNE 542
            VIYNTMI+GYCK+GSSYRALRLL+EM E G+VPNVASY  TI  L KDGK  EA+ LL E
Sbjct: 481  VIYNTMIHGYCKEGSSYRALRLLQEMCEKGLVPNVASYSSTIGLLYKDGKWQEAEALLKE 540

Query: 541  MVESGMNPSDSIYSTISKAKH 479
            +VESG+ P+ SIY  ISK KH
Sbjct: 541  IVESGLKPTVSIYKLISKPKH 561


>ref|XP_012471332.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            isoform X3 [Gossypium raimondii]
          Length = 560

 Score =  625 bits (1611), Expect = e-176
 Identities = 321/552 (58%), Positives = 392/552 (71%)
 Frame = -1

Query: 2134 LMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLLLQLIXXXX 1955
            L+ K+ K+PPLKA SLFNSS L G Q T ES +  L+IL+SSN+   +QSLLLQ+I    
Sbjct: 7    LIPKLAKNPPLKALSLFNSSILQGLQHTPESISFTLHILLSSNLRFHSQSLLLQIISGRI 66

Query: 1954 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYANEMVNKGLTP 1775
                                        +YE++INA++QS+ P +A++Y N+MV+K    
Sbjct: 67   SSPFFTPSSLFHYLTQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMVDKNFVV 126

Query: 1774 RXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIKGFELLA 1595
                             FEKAW  F E K  V LD YSFGI+IKGCCE GDL K FELL 
Sbjct: 127  GPNTFNGIMDFLIKFYCFEKAWTLFQESKGRVKLDVYSFGILIKGCCEAGDLGKSFELLD 186

Query: 1594 QMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMINGYFKEG 1415
            Q+E++ L P VV YTTLIDGCCKNG+  +AK LF+KM  +GLVPNE+TYT +ING FK G
Sbjct: 187  QIEELGLAPNVVIYTTLIDGCCKNGDLEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRG 246

Query: 1414 LKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVTFN 1235
            L+ +GLELYE+M+ +GV P++YTYNS++  YC  G + KAFE+F EMR +GVA NVVT+N
Sbjct: 247  LENDGLELYEKMQRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYN 306

Query: 1234 TLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMKES 1055
             LIGGLCRE++  EAEK+V +MK+ GLSPN ITY+ L+DGFC VGKL+KA  LF Q+K  
Sbjct: 307  ILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTK 366

Query: 1054 GQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEKA 875
            GQ+ SLVTYNILI  FSRA      A  VKEMEERGI PSK+TYTI+ID F+RS N EKA
Sbjct: 367  GQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSKNTEKA 426

Query: 874  FELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIYG 695
            FEL+  M+KAG+  DVY YGVLIHGLCI GNMKDA KLF  M E +LKPNDVIYNTM++G
Sbjct: 427  FELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKPNDVIYNTMVHG 486

Query: 694  YCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMNPS 515
            YCKQGSSYRALRLL+EM+E  +VPNVASY  TI  LCKDGK  EA+ L+ EMVESG  P+
Sbjct: 487  YCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKWQEAEALVTEMVESGFKPT 546

Query: 514  DSIYSTISKAKH 479
             SIY+ IS+ K+
Sbjct: 547  VSIYNLISEIKN 558


>ref|XP_008223610.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            [Prunus mume]
          Length = 569

 Score =  614 bits (1584), Expect = e-173
 Identities = 308/560 (55%), Positives = 403/560 (71%)
 Frame = -1

Query: 2161 MSQTQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSL 1982
            MS T     L+QKMVKSPPLKAFS+FNSSTL GFQ T +S + IL+ L+SSNM   AQS+
Sbjct: 1    MSLTNEALLLIQKMVKSPPLKAFSIFNSSTLQGFQHTHQSISFILHRLLSSNMPTHAQSI 60

Query: 1981 LLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYAN 1802
            +LQ++                                ++E +INA++QS+ P++AL++  
Sbjct: 61   ILQVLSGRLSSPFFTPSSLLHHLTQPHLSSNPLCSH-LFETIINAHVQSQLPEQALYFLK 119

Query: 1801 EMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGD 1622
            +MV++GL PR                F KAW  FNE K  V+LD YSFGIMIK CCE GD
Sbjct: 120  QMVDQGLVPRSNTFNNLLGFLVKSKDFGKAWWVFNEFKGRVELDVYSFGIMIKSCCEAGD 179

Query: 1621 LIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTA 1442
            L +GFELL Q+E+M L P VV ++TLIDGCCKNG+   AKK+F KM  +GLV N++TYT+
Sbjct: 180  LDRGFELLVQLEEMGLSPNVVIFSTLIDGCCKNGDLERAKKMFGKMEELGLVANQYTYTS 239

Query: 1441 MINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKG 1262
            +I+G FK+G K++G ELY++MK  GV PN+ TYN +I E C +G +++A ELF EMR +G
Sbjct: 240  LIDGLFKKGHKKDGFELYDKMKSNGVVPNVCTYNCLINERCNDGKMSRALELFDEMRERG 299

Query: 1261 VARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKAL 1082
            VA NVV FNT+I GLCRE +  EAEK  ++M + G+SPN++T++ L++GFC +GKLDKAL
Sbjct: 300  VACNVVAFNTVICGLCREIRMWEAEKFFNQMIREGISPNTVTFNTLINGFCNLGKLDKAL 359

Query: 1081 SLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTF 902
            SLF Q+K +GQ+ SLVTYN+LI GF+RA    + A  V+EM +RG+ PSK+TYTILID  
Sbjct: 360  SLFDQLKSNGQSPSLVTYNVLIQGFARAQNSARVADLVREMNDRGVSPSKVTYTILIDAL 419

Query: 901  VRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPND 722
            VRSG+ME+AF++  SMEKAG++ D + YGVLIHGLC+ G+MK+A KLF+ MS+  L+PND
Sbjct: 420  VRSGDMERAFQIFFSMEKAGMVPDTHTYGVLIHGLCMKGDMKEASKLFKSMSDTNLEPND 479

Query: 721  VIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNE 542
            VIYN MI+GYCK+GSSYRALRLLKEMR+N M+PNVASY  TI  LC DGK  EA+ LL E
Sbjct: 480  VIYNMMIHGYCKEGSSYRALRLLKEMRKNRMIPNVASYSSTIVVLCNDGKWEEAEFLLKE 539

Query: 541  MVESGMNPSDSIYSTISKAK 482
            M+ES + PS S+Y+ +SKAK
Sbjct: 540  MIESDLRPSVSLYNILSKAK 559



 Score =  102 bits (254), Expect = 2e-18
 Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 5/281 (1%)
 Frame = -1

Query: 1300 KAFELFGEMRVKGVARNVVTFNTLIGGLCRERKPLEAEKIV-----HRMKKLGLSPNSIT 1136
            KAF +F    ++G      + + ++  L     P  A+ I+      R+     +P+S+ 
Sbjct: 21   KAFSIFNSSTLQGFQHTHQSISFILHRLLSSNMPTHAQSIILQVLSGRLSSPFFTPSSLL 80

Query: 1135 YHILLDGFCKVGKLDKALSLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEME 956
            +H+                  TQ   S        +  +I    ++ + EQA +F+K+M 
Sbjct: 81   HHL------------------TQPHLSSNPLCSHLFETIINAHVQSQLPEQALYFLKQMV 122

Query: 955  ERGICPSKITYTILIDTFVRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMK 776
            ++G+ P   T+  L+   V+S +  KA+ + +   K  V  DVY +G++I   C  G++ 
Sbjct: 123  DQGLVPRSNTFNNLLGFLVKSKDFGKAWWVFNEF-KGRVELDVYSFGIMIKSCCEAGDLD 181

Query: 775  DALKLFRLMSEKELKPNDVIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTI 596
               +L   + E  L PN VI++T+I G CK G   RA ++  +M E G+V N  +Y   I
Sbjct: 182  RGFELLVQLEEMGLSPNVVIFSTLIDGCCKNGDLERAKKMFGKMEELGLVANQYTYTSLI 241

Query: 595  AALCKDGKLNEADDLLNEMVESGMNPSDSIYSTISKAKHED 473
              L K G   +  +L ++M  +G+ P+   Y+ +   +  D
Sbjct: 242  DGLFKKGHKKDGFELYDKMKSNGVVPNVCTYNCLINERCND 282


>ref|XP_012471331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            isoform X2 [Gossypium raimondii]
          Length = 577

 Score =  609 bits (1571), Expect = e-171
 Identities = 313/535 (58%), Positives = 380/535 (71%)
 Frame = -1

Query: 2134 LMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLLLQLIXXXX 1955
            L+ K+ K+PPLKA SLFNSS L G Q T ES +  L+IL+SSN+   +QSLLLQ+I    
Sbjct: 7    LIPKLAKNPPLKALSLFNSSILQGLQHTPESISFTLHILLSSNLRFHSQSLLLQIISGRI 66

Query: 1954 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYANEMVNKGLTP 1775
                                        +YE++INA++QS+ P +A++Y N+MV+K    
Sbjct: 67   SSPFFTPSSLFHYLTQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMVDKNFVV 126

Query: 1774 RXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIKGFELLA 1595
                             FEKAW  F E K  V LD YSFGI+IKGCCE GDL K FELL 
Sbjct: 127  GPNTFNGIMDFLIKFYCFEKAWTLFQESKGRVKLDVYSFGILIKGCCEAGDLGKSFELLD 186

Query: 1594 QMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMINGYFKEG 1415
            Q+E++ L P VV YTTLIDGCCKNG+  +AK LF+KM  +GLVPNE+TYT +ING FK G
Sbjct: 187  QIEELGLAPNVVIYTTLIDGCCKNGDLEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRG 246

Query: 1414 LKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVTFN 1235
            L+ +GLELYE+M+ +GV P++YTYNS++  YC  G + KAFE+F EMR +GVA NVVT+N
Sbjct: 247  LENDGLELYEKMQRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYN 306

Query: 1234 TLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMKES 1055
             LIGGLCRE++  EAEK+V +MK+ GLSPN ITY+ L+DGFC VGKL+KA  LF Q+K  
Sbjct: 307  ILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTK 366

Query: 1054 GQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEKA 875
            GQ+ SLVTYNILI  FSRA      A  VKEMEERGI PSK+TYTI+ID F+RS N EKA
Sbjct: 367  GQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSKNTEKA 426

Query: 874  FELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIYG 695
            FEL+  M+KAG+  DVY YGVLIHGLCI GNMKDA KLF  M E +LKPNDVIYNTM++G
Sbjct: 427  FELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKPNDVIYNTMVHG 486

Query: 694  YCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVES 530
            YCKQGSSYRALRLL+EM+E  +VPNVASY  TI  LCKDGK  EA+ L+ EMVES
Sbjct: 487  YCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKWQEAEALVTEMVES 541



 Score =  183 bits (465), Expect = 5e-43
 Identities = 108/356 (30%), Positives = 188/356 (52%), Gaps = 1/356 (0%)
 Frame = -1

Query: 1558 TYTTLIDGCCKNGNFNEAKKLFSKM-GTVGLVPNEFTYTAMINGYFKEGLKREGLELYEE 1382
            T+  ++D   K   F +A  LF +  G V L  + +++  +I G  + G   +  EL ++
Sbjct: 130  TFNGIMDFLIKFYCFEKAWTLFQESKGRVKL--DVYSFGILIKGCCEAGDLGKSFELLDQ 187

Query: 1381 MKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVTFNTLIGGLCRERK 1202
            ++  G+ PN+  Y ++I   C+NG+L +A  LF +M   G+  N  T+  LI GL +   
Sbjct: 188  IEELGLAPNVVIYTTLIDGCCKNGDLEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRGL 247

Query: 1201 PLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMKESGQTASLVTYNI 1022
              +  ++  +M++ G+ P+  TY+ ++  +C  GK+ KA  +F +M+E G   ++VTYNI
Sbjct: 248  ENDGLELYEKMQRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNI 307

Query: 1021 LIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEKAFELHSSMEKAG 842
            LI G  R   + +A   V +M+  G+ P+ ITY  LID F   G +EKA  L   ++  G
Sbjct: 308  LIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKG 367

Query: 841  VITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIYGYCKQGSSYRAL 662
                +  Y +LI       +     KL + M E+ ++P+ V Y  +I  + +  ++ +A 
Sbjct: 368  QSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSKNTEKAF 427

Query: 661  RLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMNPSDSIYSTI 494
             L   M++ G+ P+V +YG+ I  LC  G + +A  L   M E  + P+D IY+T+
Sbjct: 428  ELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKPNDVIYNTM 483



 Score =  167 bits (422), Expect = 5e-38
 Identities = 99/324 (30%), Positives = 169/324 (52%), Gaps = 2/324 (0%)
 Frame = -1

Query: 1450 YTAMINGYFKEGLKREGLELYEEM--KLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGE 1277
            Y ++IN + +  L  + +  + +M  K   V PN  T+N I+    +     KA+ LF E
Sbjct: 96   YESIINAHVQSQLPDQAIYYFNQMVDKNFVVGPN--TFNGIMDFLIKFYCFEKAWTLFQE 153

Query: 1276 MRVKGVARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGK 1097
             + + V  +V +F  LI G C      ++ +++ ++++LGL+PN + Y  L+DG CK G 
Sbjct: 154  SKGR-VKLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVVIYTTLIDGCCKNGD 212

Query: 1096 LDKALSLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTI 917
            L++A  LF +M+E G   +  TY +LI G  + G+        ++M+ +G+ PS  TY  
Sbjct: 213  LEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRGLENDGLELYEKMQRKGVIPSLYTYNS 272

Query: 916  LIDTFVRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKE 737
            ++  +   G + KAFE+   M + GV  +V  Y +LI GLC    +++A KL   M    
Sbjct: 273  VMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTG 332

Query: 736  LKPNDVIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEAD 557
            L PN + YN++I G+C  G   +A  L  +++  G  P++ +Y + I+A  +        
Sbjct: 333  LSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIA 392

Query: 556  DLLNEMVESGMNPSDSIYSTISKA 485
             L+ EM E G+ PS   Y+ +  A
Sbjct: 393  KLVKEMEERGIRPSKVTYTIVIDA 416



 Score =  124 bits (310), Expect = 5e-25
 Identities = 84/316 (26%), Positives = 141/316 (44%), Gaps = 36/316 (11%)
 Frame = -1

Query: 1867 YEALINAYIQSRKPQEALFYANEMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNE-K 1691
            Y  LIN   +     + L    +M  KG+ P                   KA+  F+E +
Sbjct: 235  YTVLINGLFKRGLENDGLELYEKMQRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMR 294

Query: 1690 KCMVDLDSYSFGIMIKGCCEVGDLIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFN 1511
            +  V  +  ++ I+I G C    L +  +L+ QM++  L P ++TY +LIDG C  G   
Sbjct: 295  ERGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLE 354

Query: 1510 EAKKLFSKMGTVG-----------------------------------LVPNEFTYTAMI 1436
            +A+ LF ++ T G                                   + P++ TYT +I
Sbjct: 355  KARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVI 414

Query: 1435 NGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVA 1256
            + + +     +  ELY  M+  G+ P++YTY  +I   C  GN+  A++LF  M    + 
Sbjct: 415  DAFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLK 474

Query: 1255 RNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSL 1076
             N V +NT++ G C++     A +++  MK+  L PN  +Y+  +   CK GK  +A +L
Sbjct: 475  PNDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKWQEAEAL 534

Query: 1075 FTQMKESGQTASLVTY 1028
             T+M ES    S + Y
Sbjct: 535  VTEMVESDNRNSWMRY 550


>ref|XP_012471330.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            isoform X1 [Gossypium raimondii]
          Length = 580

 Score =  609 bits (1571), Expect = e-171
 Identities = 313/535 (58%), Positives = 380/535 (71%)
 Frame = -1

Query: 2134 LMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLLLQLIXXXX 1955
            L+ K+ K+PPLKA SLFNSS L G Q T ES +  L+IL+SSN+   +QSLLLQ+I    
Sbjct: 7    LIPKLAKNPPLKALSLFNSSILQGLQHTPESISFTLHILLSSNLRFHSQSLLLQIISGRI 66

Query: 1954 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYANEMVNKGLTP 1775
                                        +YE++INA++QS+ P +A++Y N+MV+K    
Sbjct: 67   SSPFFTPSSLFHYLTQHCFSPNSMNQIRLYESIINAHVQSQLPDQAIYYFNQMVDKNFVV 126

Query: 1774 RXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIKGFELLA 1595
                             FEKAW  F E K  V LD YSFGI+IKGCCE GDL K FELL 
Sbjct: 127  GPNTFNGIMDFLIKFYCFEKAWTLFQESKGRVKLDVYSFGILIKGCCEAGDLGKSFELLD 186

Query: 1594 QMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMINGYFKEG 1415
            Q+E++ L P VV YTTLIDGCCKNG+  +AK LF+KM  +GLVPNE+TYT +ING FK G
Sbjct: 187  QIEELGLAPNVVIYTTLIDGCCKNGDLEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRG 246

Query: 1414 LKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVTFN 1235
            L+ +GLELYE+M+ +GV P++YTYNS++  YC  G + KAFE+F EMR +GVA NVVT+N
Sbjct: 247  LENDGLELYEKMQRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYN 306

Query: 1234 TLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMKES 1055
             LIGGLCRE++  EAEK+V +MK+ GLSPN ITY+ L+DGFC VGKL+KA  LF Q+K  
Sbjct: 307  ILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTK 366

Query: 1054 GQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEKA 875
            GQ+ SLVTYNILI  FSRA      A  VKEMEERGI PSK+TYTI+ID F+RS N EKA
Sbjct: 367  GQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSKNTEKA 426

Query: 874  FELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIYG 695
            FEL+  M+KAG+  DVY YGVLIHGLCI GNMKDA KLF  M E +LKPNDVIYNTM++G
Sbjct: 427  FELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKPNDVIYNTMVHG 486

Query: 694  YCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVES 530
            YCKQGSSYRALRLL+EM+E  +VPNVASY  TI  LCKDGK  EA+ L+ EMVES
Sbjct: 487  YCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKWQEAEALVTEMVES 541



 Score =  183 bits (465), Expect = 5e-43
 Identities = 108/356 (30%), Positives = 188/356 (52%), Gaps = 1/356 (0%)
 Frame = -1

Query: 1558 TYTTLIDGCCKNGNFNEAKKLFSKM-GTVGLVPNEFTYTAMINGYFKEGLKREGLELYEE 1382
            T+  ++D   K   F +A  LF +  G V L  + +++  +I G  + G   +  EL ++
Sbjct: 130  TFNGIMDFLIKFYCFEKAWTLFQESKGRVKL--DVYSFGILIKGCCEAGDLGKSFELLDQ 187

Query: 1381 MKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVTFNTLIGGLCRERK 1202
            ++  G+ PN+  Y ++I   C+NG+L +A  LF +M   G+  N  T+  LI GL +   
Sbjct: 188  IEELGLAPNVVIYTTLIDGCCKNGDLEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRGL 247

Query: 1201 PLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMKESGQTASLVTYNI 1022
              +  ++  +M++ G+ P+  TY+ ++  +C  GK+ KA  +F +M+E G   ++VTYNI
Sbjct: 248  ENDGLELYEKMQRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNI 307

Query: 1021 LIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEKAFELHSSMEKAG 842
            LI G  R   + +A   V +M+  G+ P+ ITY  LID F   G +EKA  L   ++  G
Sbjct: 308  LIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKG 367

Query: 841  VITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIYGYCKQGSSYRAL 662
                +  Y +LI       +     KL + M E+ ++P+ V Y  +I  + +  ++ +A 
Sbjct: 368  QSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVIDAFIRSKNTEKAF 427

Query: 661  RLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMNPSDSIYSTI 494
             L   M++ G+ P+V +YG+ I  LC  G + +A  L   M E  + P+D IY+T+
Sbjct: 428  ELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLKPNDVIYNTM 483



 Score =  167 bits (422), Expect = 5e-38
 Identities = 99/324 (30%), Positives = 169/324 (52%), Gaps = 2/324 (0%)
 Frame = -1

Query: 1450 YTAMINGYFKEGLKREGLELYEEM--KLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGE 1277
            Y ++IN + +  L  + +  + +M  K   V PN  T+N I+    +     KA+ LF E
Sbjct: 96   YESIINAHVQSQLPDQAIYYFNQMVDKNFVVGPN--TFNGIMDFLIKFYCFEKAWTLFQE 153

Query: 1276 MRVKGVARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGK 1097
             + + V  +V +F  LI G C      ++ +++ ++++LGL+PN + Y  L+DG CK G 
Sbjct: 154  SKGR-VKLDVYSFGILIKGCCEAGDLGKSFELLDQIEELGLAPNVVIYTTLIDGCCKNGD 212

Query: 1096 LDKALSLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTI 917
            L++A  LF +M+E G   +  TY +LI G  + G+        ++M+ +G+ PS  TY  
Sbjct: 213  LEQAKLLFAKMEELGLVPNEYTYTVLINGLFKRGLENDGLELYEKMQRKGVIPSLYTYNS 272

Query: 916  LIDTFVRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKE 737
            ++  +   G + KAFE+   M + GV  +V  Y +LI GLC    +++A KL   M    
Sbjct: 273  VMKVYCSEGKVGKAFEMFDEMRERGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTG 332

Query: 736  LKPNDVIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEAD 557
            L PN + YN++I G+C  G   +A  L  +++  G  P++ +Y + I+A  +        
Sbjct: 333  LSPNLITYNSLIDGFCNVGKLEKARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIA 392

Query: 556  DLLNEMVESGMNPSDSIYSTISKA 485
             L+ EM E G+ PS   Y+ +  A
Sbjct: 393  KLVKEMEERGIRPSKVTYTIVIDA 416



 Score =  124 bits (310), Expect = 5e-25
 Identities = 84/316 (26%), Positives = 141/316 (44%), Gaps = 36/316 (11%)
 Frame = -1

Query: 1867 YEALINAYIQSRKPQEALFYANEMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNE-K 1691
            Y  LIN   +     + L    +M  KG+ P                   KA+  F+E +
Sbjct: 235  YTVLINGLFKRGLENDGLELYEKMQRKGVIPSLYTYNSVMKVYCSEGKVGKAFEMFDEMR 294

Query: 1690 KCMVDLDSYSFGIMIKGCCEVGDLIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFN 1511
            +  V  +  ++ I+I G C    L +  +L+ QM++  L P ++TY +LIDG C  G   
Sbjct: 295  ERGVACNVVTYNILIGGLCREKRLREAEKLVDQMKRTGLSPNLITYNSLIDGFCNVGKLE 354

Query: 1510 EAKKLFSKMGTVG-----------------------------------LVPNEFTYTAMI 1436
            +A+ LF ++ T G                                   + P++ TYT +I
Sbjct: 355  KARYLFGQLKTKGQSPSLVTYNILISAFSRAKDSTTIAKLVKEMEERGIRPSKVTYTIVI 414

Query: 1435 NGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVA 1256
            + + +     +  ELY  M+  G+ P++YTY  +I   C  GN+  A++LF  M    + 
Sbjct: 415  DAFIRSKNTEKAFELYLFMQKAGLGPDVYTYGVLIHGLCIKGNMKDAWKLFTSMDEMQLK 474

Query: 1255 RNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSL 1076
             N V +NT++ G C++     A +++  MK+  L PN  +Y+  +   CK GK  +A +L
Sbjct: 475  PNDVIYNTMVHGYCKQGSSYRALRLLQEMKEKRLVPNVASYNSTIGVLCKDGKWQEAEAL 534

Query: 1075 FTQMKESGQTASLVTY 1028
             T+M ES    S + Y
Sbjct: 535  VTEMVESDNRNSWMRY 550


>ref|XP_008357226.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            [Malus domestica]
          Length = 567

 Score =  603 bits (1554), Expect = e-169
 Identities = 298/560 (53%), Positives = 397/560 (70%)
 Frame = -1

Query: 2161 MSQTQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSL 1982
            MS T+    L+QKMVKSPPLKAFS+FNSSTL GF  + +S + IL+ L++SN++  AQSL
Sbjct: 1    MSLTREAQLLIQKMVKSPPLKAFSIFNSSTLRGFHHSHQSISFILHHLLASNLISHAQSL 60

Query: 1981 LLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYAN 1802
            +LQ++                                +YEA++NA+ QS+ P++AL++  
Sbjct: 61   ILQVLSGRLSSPFFTPSSLLGHLTQPNLNPTSVCGN-LYEAIVNAHAQSQSPEQALYFLK 119

Query: 1801 EMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGD 1622
            +MV +GL PR                  KAW  F+E K  V+LD YSFGI++K CCE G+
Sbjct: 120  QMVEQGLVPRSNTFNNLLGSLVKAKDHGKAWRVFDEFKGKVELDVYSFGIVMKSCCEAGN 179

Query: 1621 LIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTA 1442
            L +GFELL ++E++   P VV YTTLIDGCCKNG+   AKK+FSK+  VGLV N++TYT 
Sbjct: 180  LDRGFELLIELEELGWVPNVVLYTTLIDGCCKNGDLERAKKMFSKIEEVGLVANQYTYTV 239

Query: 1441 MINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKG 1262
            +I+G+FK+G K++G ELYE+MK  GV PN+ TY  +I E C NG + +A +LF EMR +G
Sbjct: 240  LIHGFFKKGYKKDGFELYEKMKSNGVVPNVCTYTCLINECCSNGEVKRALKLFDEMRERG 299

Query: 1261 VARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKAL 1082
            VARNVV +NT+IGGLC+E +  EA+  V+RMK+ G+SPN +TY+ L++GFC VG+LD+A 
Sbjct: 300  VARNVVAYNTVIGGLCKETRIWEADNFVNRMKREGISPNVVTYNALIEGFCNVGELDRAS 359

Query: 1081 SLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTF 902
            SLF Q+K SG + +LVTYN+LI GF+RA    +A+  V+EM +RG+ PSK+TYTILID  
Sbjct: 360  SLFNQLKSSGLSPTLVTYNVLIQGFARAQNSARASDLVREMSDRGVSPSKVTYTILIDDL 419

Query: 901  VRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPND 722
            VRSG  E+AF++ SSMEKAGV+ DVY YGVLIHGLC  G+MK+A KLF+ M +K L PND
Sbjct: 420  VRSGYTERAFQIFSSMEKAGVVPDVYTYGVLIHGLCTKGDMKEASKLFKSMGDKHLNPND 479

Query: 721  VIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNE 542
            V++N MI+GYC++GSSYRALRLLKEMR NGM+PNVASY  TI  LC DGK  +A+ LL +
Sbjct: 480  VVFNMMIHGYCREGSSYRALRLLKEMRRNGMIPNVASYSSTIGVLCNDGKWEDAEMLLKD 539

Query: 541  MVESGMNPSDSIYSTISKAK 482
            M ESG+ P  S+Y+ IS+ K
Sbjct: 540  MTESGLKPPVSLYNVISRVK 559


>ref|XP_009364397.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            [Pyrus x bretschneideri]
          Length = 567

 Score =  598 bits (1542), Expect = e-168
 Identities = 298/560 (53%), Positives = 394/560 (70%)
 Frame = -1

Query: 2161 MSQTQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSL 1982
            MS T+    L+QKMVKSPPLKAFS+FNSS L GF  T +S + IL+ L++SN++  AQSL
Sbjct: 1    MSLTREAQLLIQKMVKSPPLKAFSIFNSSILRGFHHTHQSISFILHQLLASNLISHAQSL 60

Query: 1981 LLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYAN 1802
             LQ++                                +YEA++NA++QS+ P++AL++  
Sbjct: 61   FLQVLSGRLSSPFFTPSSLLGHLTQPNLNPTSVCGH-LYEAIVNAHVQSQSPEQALYFLK 119

Query: 1801 EMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGD 1622
            +MV +GL PR                  KAW  F+E K  V+LD YSFGI++K CCE G+
Sbjct: 120  QMVEQGLVPRSNTFNNLLGFLVKGKDHGKAWRVFDEFKGKVELDVYSFGIVMKSCCEAGN 179

Query: 1621 LIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTA 1442
            L +GFELL ++E +   P VV YTTLIDGCCKNG+   AKK+F K+  VGLV N++TYT 
Sbjct: 180  LDRGFELLIELEGLGWAPNVVLYTTLIDGCCKNGDLERAKKMFCKIEEVGLVANQYTYTV 239

Query: 1441 MINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKG 1262
            +I+G+FK+G K++G ELYE+MK  GV PN+ TY  +I E C NG + +A +LF EMR +G
Sbjct: 240  LIHGFFKKGYKKDGFELYEKMKSNGVVPNVCTYTCLINECCGNGEVKRALKLFDEMRERG 299

Query: 1261 VARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKAL 1082
            VARNVV +NT+IGGLC+E +  EA+  V+RMK+ G+SPN +TY+ L++GFC VG+LD+A 
Sbjct: 300  VARNVVAYNTVIGGLCKEMRIWEADNFVNRMKREGISPNVVTYNALIEGFCNVGELDRAS 359

Query: 1081 SLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTF 902
            SLF Q+K SGQ+ +LVTYN+LI GF+RA    + +  V+EM +RG+ PSK+TYTILID  
Sbjct: 360  SLFNQLKSSGQSPTLVTYNVLIQGFARAQNSARVSDLVREMSDRGVSPSKVTYTILIDGL 419

Query: 901  VRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPND 722
            VRSG+ E+AF++ SSMEKAGV+ DVY YGVLIHG C  G+MK+A KLF+ MS+K L PND
Sbjct: 420  VRSGDTERAFQIFSSMEKAGVVPDVYTYGVLIHGSCTKGDMKEASKLFKSMSDKHLNPND 479

Query: 721  VIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNE 542
            VI+N MI+GYC++GSSYRALRLLKEMR N M+PNVASY  TI  LC DGK  EA+ LL +
Sbjct: 480  VIFNMMIHGYCREGSSYRALRLLKEMRRNIMIPNVASYSSTIGVLCNDGKWEEAEMLLKD 539

Query: 541  MVESGMNPSDSIYSTISKAK 482
            M ESG+ P  S+Y+ IS+ K
Sbjct: 540  MTESGLKPPVSLYNLISRVK 559


>ref|XP_012075956.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            [Jatropha curcas]
          Length = 570

 Score =  591 bits (1524), Expect = e-166
 Identities = 302/553 (54%), Positives = 385/553 (69%), Gaps = 1/553 (0%)
 Frame = -1

Query: 2134 LMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLLLQLIXXXX 1955
            L+ KMVK PPLKAF LFNSS   G   + +S + IL+ L++SN+L + QSLLLQL+    
Sbjct: 12   LIPKMVKLPPLKAFWLFNSSIHRGINPSHQSISFILHHLLNSNLLSQTQSLLLQLLCNRI 71

Query: 1954 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYANEMVNKGLTP 1775
                                       L+YE++I AY+QS   ++A+FY N+M++ GL P
Sbjct: 72   SSPFFTISSLLHYLTQPTSNSNSTISTLLYESIIIAYVQSDSTEQAVFYFNQMIDNGLIP 131

Query: 1774 RXXXXXXXXXXXXXXXLFEKAWCFFNE-KKCMVDLDSYSFGIMIKGCCEVGDLIKGFELL 1598
            R                FEK+  FF+E K+  V LD YS+GI+IK CC  GDL +GFELL
Sbjct: 132  RPNTFNTLLNSLVKSSCFEKSLLFFDEAKEKKVKLDVYSYGILIKACCGFGDLNRGFELL 191

Query: 1597 AQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMINGYFKE 1418
             Q+E+M   P VV YTTLIDGCCKNG+   AK LF KMG +GL  N++TYT +ING+FK+
Sbjct: 192  TQLEEMGFSPNVVIYTTLIDGCCKNGDIERAKVLFDKMGEMGLAANQYTYTVLINGFFKK 251

Query: 1417 GLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVTF 1238
            GLK++G ELYE+M+L GV+PN+YTYNSII EYC  G + KA+ELF EM  +GV RN VT+
Sbjct: 252  GLKKDGFELYEKMQLDGVSPNLYTYNSIISEYCNEGEIYKAYELFDEMCNRGVTRNAVTY 311

Query: 1237 NTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMKE 1058
            NTLI GLC+E +  EAEK V +MKK  +SPN +TY+ L+ GFC V +LDKALS F Q+K 
Sbjct: 312  NTLIRGLCKEMRVWEAEKFVDQMKKACISPNLVTYNTLIHGFCSVQRLDKALSFFNQLKS 371

Query: 1057 SGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEK 878
            +G + SLVTYN+LI G+S AG      +  KEMEERGI PSK+TYTILI   VR  +MEK
Sbjct: 372  NGLSPSLVTYNVLIEGYSDAGNWVAVTNLAKEMEERGISPSKVTYTILIKAHVRLEDMEK 431

Query: 877  AFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIY 698
            AF   SSMEK G++ DV+ YGV++HGLC+ G M +A KLFR MSE +L+PNDVIYNTMI 
Sbjct: 432  AFHFFSSMEKVGLVPDVHTYGVILHGLCMKGKMNEASKLFRSMSEMKLEPNDVIYNTMIN 491

Query: 697  GYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMNP 518
            GYCK+G+S+RALR L+EM + G+VPNVASY  +I  LCKDGK  EA  LLN+M+ESG+ P
Sbjct: 492  GYCKEGNSFRALRFLQEMEDKGLVPNVASYSSSIGVLCKDGKWQEAGVLLNKMIESGLKP 551

Query: 517  SDSIYSTISKAKH 479
            S SIY+ IS+AK+
Sbjct: 552  SVSIYNIISEAKY 564



 Score = 65.1 bits (157), Expect = 3e-07
 Identities = 47/199 (23%), Positives = 78/199 (39%)
 Frame = -1

Query: 1057 SGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEK 878
            S  T S + Y  +I+ + ++   EQA  +  +M + G+ P   T+  L+++ V+S   EK
Sbjct: 92   SNSTISTLLYESIIIAYVQSDSTEQAVFYFNQMIDNGLIPRPNTFNTLLNSLVKSSCFEK 151

Query: 877  AFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIY 698
            +                                   L  F    EK++K +   Y  +I 
Sbjct: 152  S-----------------------------------LLFFDEAKEKKVKLDVYSYGILIK 176

Query: 697  GYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMNP 518
              C  G   R   LL ++ E G  PNV  Y   I   CK+G +  A  L ++M E G+  
Sbjct: 177  ACCGFGDLNRGFELLTQLEEMGFSPNVVIYTTLIDGCCKNGDIERAKVLFDKMGEMGLAA 236

Query: 517  SDSIYSTISKAKHEDSHKK 461
            +   Y+ +     +   KK
Sbjct: 237  NQYTYTVLINGFFKKGLKK 255


>ref|XP_006372552.1| hypothetical protein POPTR_0017s02730g [Populus trichocarpa]
            gi|550319181|gb|ERP50349.1| hypothetical protein
            POPTR_0017s02730g [Populus trichocarpa]
          Length = 564

 Score =  581 bits (1497), Expect = e-162
 Identities = 296/552 (53%), Positives = 382/552 (69%)
 Frame = -1

Query: 2134 LMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLLLQLIXXXX 1955
            L+QKMVK PPL+A SLFNSS   GFQ T  S + +L  L+  + L  AQSL+LQ++    
Sbjct: 9    LIQKMVKIPPLQALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKI 68

Query: 1954 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYANEMVNKGLTP 1775
                                        +YE++INA+++S+   +AL + NEMV+KGL  
Sbjct: 69   SSPFFTVPSLLHHLTQNQNPSMTTAL--LYESIINAHLKSQLLDKALIFFNEMVDKGLVF 126

Query: 1774 RXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIKGFELLA 1595
            R                FEKAW FFNE K  V  D YSFGIMIKGCCE G+L K F+LL 
Sbjct: 127  RPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLG 186

Query: 1594 QMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMINGYFKEG 1415
             ++ M L P VV YTTLIDGCCKNG+   A+  F KMG +GLV N++T+T +ING FK+G
Sbjct: 187  LLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKG 246

Query: 1414 LKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVTFN 1235
            LK++G +L+E+MK+ G+ PN+YTYN ++ EYC  G + +AF+LF EMR +GV  NVVT+N
Sbjct: 247  LKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYN 306

Query: 1234 TLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMKES 1055
            TLIGG+CRE +  EAEK+V +MKK  +SPN ITY+ L+ GFC VG LDKA SL  Q+K +
Sbjct: 307  TLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLISGFCDVGNLDKASSLLDQLKSN 366

Query: 1054 GQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEKA 875
            G + SLVTYNILI G+S+AG  +  A   +EME RGI PSK+T T+LID +VR   MEKA
Sbjct: 367  GLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKA 426

Query: 874  FELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIYG 695
            F+++SSMEK G++ DVYVYGVLIHGLC+ GNMK++ KLFR M E  ++P+DVIYNTMI+G
Sbjct: 427  FQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHG 486

Query: 694  YCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMNPS 515
            YCK+ +SYRALRLL+EM   G+VPNVASY   I  LCKDGK  EA+ LL++M+E  + PS
Sbjct: 487  YCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPS 546

Query: 514  DSIYSTISKAKH 479
             SI + ISKAK+
Sbjct: 547  ASILNMISKAKN 558


>ref|XP_004294524.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            [Fragaria vesca subsp. vesca]
          Length = 569

 Score =  580 bits (1495), Expect = e-162
 Identities = 295/566 (52%), Positives = 388/566 (68%)
 Frame = -1

Query: 2152 TQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLLLQ 1973
            T+    L+QKMVKSPPLKA S+FNSSTL GF  T  S + IL+ L+SSN+   A SLLL 
Sbjct: 5    TKEALLLIQKMVKSPPLKALSIFNSSTLQGFHHTHLSISFILHNLISSNLQTHAHSLLLH 64

Query: 1972 LIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYANEMV 1793
            L+                                ++EA+INA++QS  P +AL+Y + MV
Sbjct: 65   LLSGRISSPFFTPLSLLHDLTQPNSTPLPTSSL-LHEAIINAHVQSHSPSQALYYLSNMV 123

Query: 1792 NKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIK 1613
             +G+ P                 FEKAW  FNE K  V LD YSFGI++K CCE G+L +
Sbjct: 124  QQGMVPTSNTFNNVLGFLVKSRDFEKAWRVFNEFKSRVQLDLYSFGIVVKSCCEGGELDR 183

Query: 1612 GFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMIN 1433
            GF +L + E+M   P VV YTTLIDGCCKNG+   A+K+F KMG VGLV N++TYT +I+
Sbjct: 184  GFGVLDETEEMGWSPNVVIYTTLIDGCCKNGDLERAEKMFCKMGEVGLVANQYTYTVLID 243

Query: 1432 GYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVAR 1253
            G FK+G  +EG ELYE+MK+ GV PN  TY+ +I   C++G ++ A ELF EMR +G+A 
Sbjct: 244  GMFKKGRSKEGFELYEKMKINGVVPNTRTYSCLISGLCKDGKMSSALELFDEMRERGMAC 303

Query: 1252 NVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLF 1073
            NVVT+N +IGGLC+E +  EAE+ V+ MK+ G+SP+ +T++ L+DGFC +GKLDKA+SLF
Sbjct: 304  NVVTYNIIIGGLCQEMRVWEAERFVNEMKRDGISPSVVTFNTLIDGFCGIGKLDKAMSLF 363

Query: 1072 TQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRS 893
             Q+K SGQ+ SLVTYN+LI GF++A         ++EME RG+ PSK+TYTI+ID  VRS
Sbjct: 364  DQLKSSGQSPSLVTYNVLIRGFAKARNSTGVTDLLREMENRGMAPSKVTYTIVIDALVRS 423

Query: 892  GNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIY 713
             +ME+AF + SSMEK+G++ DVY YGVLIHGLC+ GNM +A KL + MS+  L+PNDVI+
Sbjct: 424  DDMERAFHVFSSMEKSGLMPDVYTYGVLIHGLCMKGNMIEASKLLQSMSDSNLEPNDVIF 483

Query: 712  NTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVE 533
            N MI+GYCK+GSSYRALRLLKEMR+ GMVPNVASY  TI  +  DGK  EA+ LL  M+E
Sbjct: 484  NIMIHGYCKEGSSYRALRLLKEMRKKGMVPNVASYSSTIGVMSNDGKWEEAEMLLKGMME 543

Query: 532  SGMNPSDSIYSTISKAKHEDSHKKST 455
            S + PS S+Y+ IS+ K++   K ST
Sbjct: 544  SDLKPSISLYNIISRVKNDTPVKVST 569


>ref|XP_010523333.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            [Tarenaya hassleriana]
          Length = 563

 Score =  578 bits (1491), Expect = e-162
 Identities = 292/552 (52%), Positives = 380/552 (68%)
 Frame = -1

Query: 2134 LMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLLLQLIXXXX 1955
            L+ K+VK PPLKA SLFNSS   GFQ T ES +++L +L+  N+L  AQSLLLQ+I    
Sbjct: 11   LLSKLVKVPPLKAVSLFNSSISYGFQHTHESFSLLLRLLLCRNLLSHAQSLLLQVISGRI 70

Query: 1954 XXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYANEMVNKGLTP 1775
                                        +YE ++NAY+ S+   +A+FY  EMV +GL P
Sbjct: 71   QFLDLTSSSLLRYLTETEGSSTRVR---LYEVIVNAYVHSQSLDDAVFYFKEMVGEGLVP 127

Query: 1774 RXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIKGFELLA 1595
                             F+KAW FFNE KC VDLD++SFGI+IKGCC  G+L K FELL 
Sbjct: 128  ESNCFNNLLGFVVRSCSFDKAWSFFNENKCRVDLDAHSFGIVIKGCCNAGELGKSFELLV 187

Query: 1594 QMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMINGYFKEG 1415
            ++E   L P VV YTTLIDGCCK G  ++AK LFS+M  +GLV NE TYTA+I+G FK G
Sbjct: 188  ELEHCGLCPNVVIYTTLIDGCCKKGEISKAKDLFSQMKKIGLVANEHTYTALIHGLFKNG 247

Query: 1414 LKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVTFN 1235
             K+EG EL ++M+   V PN+YTYN +I E C++G   +AF++F EMR +G+  NVVT+N
Sbjct: 248  FKKEGFELCKKMQADSVLPNLYTYNCVISELCKDGRTREAFKVFEEMRERGITCNVVTYN 307

Query: 1234 TLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMKES 1055
            TLI GLC E++  EA++ V++MK  G+ PN ITY+ LLDGFC VG+L KALSLF  +K S
Sbjct: 308  TLILGLCGEKRVFEAKRFVNQMKNAGIIPNLITYNTLLDGFCSVGELAKALSLFKDLKSS 367

Query: 1054 GQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNMEKA 875
            G + SLVTYN+LI GF +AG  + AA+ VKEMEERGI PS++TYTILI TF RSG+MEKA
Sbjct: 368  GMSPSLVTYNVLISGFCKAGDPKGAANLVKEMEERGIKPSEVTYTILIGTFARSGDMEKA 427

Query: 874  FELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMIYG 695
             +LHSSME +G+  DV+ +GVLIHG CI G M +A +LF  M ++++KPN +IYN MI G
Sbjct: 428  IQLHSSMENSGLCPDVHTFGVLIHGFCIKGQMNEASRLFMSMCDRKVKPNGIIYNKMILG 487

Query: 694  YCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMNPS 515
            YC++GSSYRALRLL+EM E   VPN+ASY  TI  LC++ K  EA+ L+ +M+ S M+PS
Sbjct: 488  YCREGSSYRALRLLREMEEKVFVPNIASYSSTIGVLCRERKWQEAEGLVEKMIASSMDPS 547

Query: 514  DSIYSTISKAKH 479
             SIY+ IS+AK+
Sbjct: 548  VSIYNMISRAKN 559


>ref|XP_006488331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690-like
            isoform X1 [Citrus sinensis]
            gi|568870277|ref|XP_006488332.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At4g11690-like isoform X2 [Citrus sinensis]
          Length = 586

 Score =  577 bits (1488), Expect = e-161
 Identities = 289/557 (51%), Positives = 390/557 (70%), Gaps = 4/557 (0%)
 Frame = -1

Query: 2137 NLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVS---SNMLVEAQSLLLQLI 1967
            NL+ +M K PPLKAFSLFN ++  G Q T +S ++IL +L+S   S+    AQ+L+L++I
Sbjct: 27   NLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII 86

Query: 1966 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-VYEALINAYIQSRKPQEALFYANEMVN 1790
                                             +YE++I+A+++SR   +ALFY ++M++
Sbjct: 87   SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 146

Query: 1789 KGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIKG 1610
             G+ PR                F K W FF+EK+  V+LD YSFGI+IKGCCE GDL K 
Sbjct: 147  SGVRPRSNTFNSLLIFVIKSCSFHKGWLFFSEKRSKVELDVYSFGILIKGCCEAGDLNKA 206

Query: 1609 FELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMING 1430
            FE+L Q+E+M   P VV YT+LIDGCCKNG+   AK LF K+G +GLV N+ TYT +I G
Sbjct: 207  FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVANQHTYTVLICG 266

Query: 1429 YFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARN 1250
             FK GLK++G E YE+M+L GV+P++YTYN +I EYC  G + + F+LF EMR + VA N
Sbjct: 267  LFKNGLKKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVNEGFKLFDEMRHREVACN 326

Query: 1249 VVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFT 1070
            VVT+NTLI GLC+E +  EAE+++ +MK  G+SPN ITY+ L+DGFC  G+ DKA  LF 
Sbjct: 327  VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 386

Query: 1069 QMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSG 890
            Q+K +GQ+ S+VTYN+LI  FS+AG  + A+  V+EMEERGI PS++TYTILID+FVRS 
Sbjct: 387  QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 446

Query: 889  NMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYN 710
            +MEKAFE++S M+K+G   DVY YGVLIHGLC+ GNMK+A KLF  M E +L+PNDV+YN
Sbjct: 447  DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVLYN 506

Query: 709  TMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVES 530
             MI+GYCK+G+SYRALRLL EM E G+VPN+ASY  TI  LC+DGK  EA+ LLN+M++ 
Sbjct: 507  MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 566

Query: 529  GMNPSDSIYSTISKAKH 479
            G+ PS S+Y+ + +AK+
Sbjct: 567  GLKPSVSLYNILYRAKN 583



 Score =  148 bits (374), Expect = 2e-32
 Identities = 95/330 (28%), Positives = 158/330 (47%)
 Frame = -1

Query: 1450 YTAMINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMR 1271
            Y ++I+ + K  L  + L  + +M   GV P   T+NS++    ++ +  K +  F E R
Sbjct: 121  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFHKGWLFFSEKR 180

Query: 1270 VKGVARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLD 1091
             K V  +V +F                                    IL+ G C+ G L+
Sbjct: 181  SK-VELDVYSFG-----------------------------------ILIKGCCEAGDLN 204

Query: 1090 KALSLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILI 911
            KA  +  Q++E G + ++V Y  LI G  + G +E+A    +++ E G+  ++ TYT+LI
Sbjct: 205  KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVANQHTYTVLI 264

Query: 910  DTFVRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELK 731
                ++G  +  FE +  M+  GV   +Y Y  LIH  C  G + +  KLF  M  +E+ 
Sbjct: 265  CGLFKNGLKKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVNEGFKLFDEMRHREVA 324

Query: 730  PNDVIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDL 551
             N V YNT+I G CK+     A RLL +M+  G+ PNV +Y   I   C  G+ ++A  L
Sbjct: 325  CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 384

Query: 550  LNEMVESGMNPSDSIYSTISKAKHEDSHKK 461
             N++  +G +PS   Y+ + +A  +  + K
Sbjct: 385  FNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 414


>gb|KDO72846.1| hypothetical protein CISIN_1g043999mg [Citrus sinensis]
          Length = 574

 Score =  577 bits (1487), Expect = e-161
 Identities = 287/557 (51%), Positives = 391/557 (70%), Gaps = 4/557 (0%)
 Frame = -1

Query: 2137 NLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVS---SNMLVEAQSLLLQLI 1967
            NL+ +M K PPLKAFSLFN ++  G Q T +S ++IL +L+S   S+    AQ+L+L++I
Sbjct: 15   NLISRMAKLPPLKAFSLFNWASRQGLQHTPQSISIILRLLLSKMSSHSHAAAQTLILKII 74

Query: 1966 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-VYEALINAYIQSRKPQEALFYANEMVN 1790
                                             +YE++I+A+++SR   +ALFY ++M++
Sbjct: 75   SGRITSSSFTPRSLLCHLTQLFPSSSNPVTKSRLYESIIDAHLKSRLSDQALFYFHQMLD 134

Query: 1789 KGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIKG 1610
             G+ PR                F+K W FF+E +C V+LD YSFGI+IKGCCE GDL K 
Sbjct: 135  SGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDLNKA 194

Query: 1609 FELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMING 1430
            FE+L Q+E+M   P VV YT+LIDGCCKNG+   AK LF K+G +GLV  + TYT +I G
Sbjct: 195  FEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLICG 254

Query: 1429 YFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARN 1250
             FK GL+++G E YE+M+L GV+P++YTYN +I EYC  G +++ F+LF EMR + VA N
Sbjct: 255  LFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVACN 314

Query: 1249 VVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFT 1070
            VVT+NTLI GLC+E +  EAE+++ +MK  G+SPN ITY+ L+DGFC  G+ DKA  LF 
Sbjct: 315  VVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRLFN 374

Query: 1069 QMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSG 890
            Q+K +GQ+ S+VTYN+LI  FS+AG  + A+  V+EMEERGI PS++TYTILID+FVRS 
Sbjct: 375  QLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFVRSD 434

Query: 889  NMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYN 710
            +MEKAFE++S M+K+G   DVY YGVLIHGLC+ GNMK+A KLF  M E +L+PNDV+YN
Sbjct: 435  DMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDVVYN 494

Query: 709  TMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVES 530
             MI+GYCK+G+SYRALRLL EM E G+VPN+ASY  TI  LC+DGK  EA+ LLN+M++ 
Sbjct: 495  MMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQMLKL 554

Query: 529  GMNPSDSIYSTISKAKH 479
            G+ PS S+Y+ + +AK+
Sbjct: 555  GLKPSVSLYNILYRAKN 571



 Score =  149 bits (376), Expect = 1e-32
 Identities = 95/330 (28%), Positives = 158/330 (47%)
 Frame = -1

Query: 1450 YTAMINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMR 1271
            Y ++I+ + K  L  + L  + +M   GV P   T+NS++    ++ +  K +  F E R
Sbjct: 109  YESIIDAHLKSRLSDQALFYFHQMLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENR 168

Query: 1270 VKGVARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLD 1091
             K V  +V +F                                    IL+ G C+ G L+
Sbjct: 169  CK-VELDVYSFG-----------------------------------ILIKGCCEAGDLN 192

Query: 1090 KALSLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILI 911
            KA  +  Q++E G + ++V Y  LI G  + G +E+A    +++ E G+  ++ TYT+LI
Sbjct: 193  KAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVLI 252

Query: 910  DTFVRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELK 731
                ++G  +  FE +  M+  GV   +Y Y  LIH  C  G + +  KLF  M  +E+ 
Sbjct: 253  CGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREVA 312

Query: 730  PNDVIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDL 551
             N V YNT+I G CK+     A RLL +M+  G+ PNV +Y   I   C  G+ ++A  L
Sbjct: 313  CNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFRL 372

Query: 550  LNEMVESGMNPSDSIYSTISKAKHEDSHKK 461
             N++  +G +PS   Y+ + +A  +  + K
Sbjct: 373  FNQLKSNGQSPSVVTYNVLIRAFSKAGNSK 402


>ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297318447|gb|EFH48869.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 575

 Score =  576 bits (1484), Expect = e-161
 Identities = 287/559 (51%), Positives = 376/559 (67%)
 Frame = -1

Query: 2158 SQTQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLL 1979
            +++Q    L+  ++K PPLKAFSL NS    GFQ T ES +++L +L+S N+   AQSLL
Sbjct: 3    AKSQKTLILLANLIKVPPLKAFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLL 62

Query: 1978 LQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYANE 1799
            LQ+I                                +YE +INAY+QS+    +++Y NE
Sbjct: 63   LQVISGKIQSQFFTSSSLLHYLTESETSKTKSR---LYEVIINAYVQSQSLDSSIYYFNE 119

Query: 1798 MVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDL 1619
            MV+KG  P                 F + WCFFNE K  V LD YSFGI+IKGCCE G++
Sbjct: 120  MVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEI 179

Query: 1618 IKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAM 1439
             K F+LL ++ +    P VV YTTLIDGCCK G   +AK LF +MG  GLV NE+TYT +
Sbjct: 180  EKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVL 239

Query: 1438 INGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGV 1259
            I+G FK G+K++G E+YE+M+  GV PN+YTYN ++ + C++G    AF++F EMR +GV
Sbjct: 240  IHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGV 299

Query: 1258 ARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALS 1079
            + N+VT+NTLIGGLCRE K  EA K++ +MK   ++PN ITY+ L+DGFC VGKL KALS
Sbjct: 300  SCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALS 359

Query: 1078 LFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFV 899
            L   +K  G + SLVTYN+L+ GF R G    AA  VKEMEERGI PSK+TYTILIDTF 
Sbjct: 360  LCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419

Query: 898  RSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDV 719
            RS NME A +L SSME+ G++ DV+ Y VLIHG CI G M +A +LF+ M EK L+PN+V
Sbjct: 420  RSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEV 479

Query: 718  IYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEM 539
            IYNTMI GYCK+GSSYRALRL ++M E  + PNVASY   I  LCK+ KL EA+DL+ +M
Sbjct: 480  IYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKM 539

Query: 538  VESGMNPSDSIYSTISKAK 482
            ++SG++PSD+I + IS+AK
Sbjct: 540  IDSGIDPSDTICNLISRAK 558



 Score = 86.7 bits (213), Expect = 9e-14
 Identities = 55/200 (27%), Positives = 100/200 (50%)
 Frame = -1

Query: 1060 ESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNME 881
            E+ +T S + Y ++I  + ++  ++ + ++  EM ++G  P    +  L+ TFV   +  
Sbjct: 88   ETSKTKSRL-YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLL-TFVVGSSSF 145

Query: 880  KAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMI 701
              +    +  K  V+ DVY +G++I G C  G ++ +  L   + E    PN VIY T+I
Sbjct: 146  NQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLI 205

Query: 700  YGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMN 521
             G CK+G   +A  L  EM + G+V N  +Y + I  L K+G   +  ++  +M E G+ 
Sbjct: 206  DGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVF 265

Query: 520  PSDSIYSTISKAKHEDSHKK 461
            P+   Y+ +     +D   K
Sbjct: 266  PNLYTYNCVMNQLCKDGRTK 285


>ref|XP_011001547.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690
            [Populus euphratica] gi|743915201|ref|XP_011001548.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g11690 [Populus euphratica]
            gi|743915203|ref|XP_011001549.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g11690
            [Populus euphratica] gi|743915205|ref|XP_011001550.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g11690 [Populus euphratica]
            gi|743915207|ref|XP_011001551.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g11690
            [Populus euphratica]
          Length = 571

 Score =  575 bits (1483), Expect = e-161
 Identities = 295/554 (53%), Positives = 381/554 (68%), Gaps = 2/554 (0%)
 Frame = -1

Query: 2134 LMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSLLLQLIXXXX 1955
            L+ KMVK PPL+A SLFNSS   GFQQT  S + +L  L+  + L  AQSLLLQ++    
Sbjct: 12   LIPKMVKIPPLQALSLFNSSIQQGFQQTHHSISFLLQHLLDHHKLPHAQSLLLQILSNRI 71

Query: 1954 XXXXXXXXXXXXXXXXXXXXXXXXXXXL--VYEALINAYIQSRKPQEALFYANEMVNKGL 1781
                                          +YE +INA+++S+   +AL + NEMV+KGL
Sbjct: 72   SSPFFTVPSLLHHLTHNQNQNQNPSMSTAPLYETIINAHLKSQLLDKALVFFNEMVDKGL 131

Query: 1780 TPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGDLIKGFEL 1601
              R                FEKAW  FNE K  V LD YSFGIMIKGCC+ G+L + F+L
Sbjct: 132  VFRPNIFNSLLGSLVGSNCFEKAWLVFNELKETVKLDVYSFGIMIKGCCQNGNLDRSFQL 191

Query: 1600 LAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTAMINGYFK 1421
            L  ++ M L P VV YTTLIDGCCKNG+   A+  F KMG +GLV N++T+T +ING FK
Sbjct: 192  LGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFK 251

Query: 1420 EGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKGVARNVVT 1241
            +GLK++G +L+E+MK+ G+ PN+YTYN ++ EYC  G + +AF+LF EMR +GV  NVVT
Sbjct: 252  KGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCSEGKICRAFDLFDEMRERGVEANVVT 311

Query: 1240 FNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKALSLFTQMK 1061
            +NTLIGG+CRE +  EAEK+V +MKK  +SPN ITY+ L+ GFC VG LDKA SL  Q+K
Sbjct: 312  YNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLK 371

Query: 1060 ESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTFVRSGNME 881
             +G + SLVTYNILI G+S+AG  +  A   +EME RGI PSK+T T+LID +VR   ME
Sbjct: 372  SNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEME 431

Query: 880  KAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPNDVIYNTMI 701
            KAF+++SSMEK G++ DVYVYGVLIHGLC+ GNMK++ KLFR M E  ++P+DVIYNTMI
Sbjct: 432  KAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEIHVEPSDVIYNTMI 491

Query: 700  YGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNEMVESGMN 521
            +GYCK+ +SYRALRLL+EM   G+VPNVASY   I  LCKDGK  EA+ LL++M+E  + 
Sbjct: 492  HGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLK 551

Query: 520  PSDSIYSTISKAKH 479
            PS SI + ISKAK+
Sbjct: 552  PSASILNMISKAKN 565


>gb|KRH50360.1| hypothetical protein GLYMA_07G217200 [Glycine max]
          Length = 556

 Score =  575 bits (1482), Expect = e-161
 Identities = 291/560 (51%), Positives = 376/560 (67%)
 Frame = -1

Query: 2161 MSQTQHVSNLMQKMVKSPPLKAFSLFNSSTLSGFQQTQESTTVILNILVSSNMLVEAQSL 1982
            MSQ+     L+QKMVK PP KA  LFN++T  G Q T  S + ILN L+SS ML +AQSL
Sbjct: 1    MSQSHEALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSL 60

Query: 1981 LLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVYEALINAYIQSRKPQEALFYAN 1802
            +L+LI                                +Y+ ++NAY+ S    +AL + +
Sbjct: 61   ILRLISGRIPSSLMLQLTQAHFTPCSTYTP-------LYDTVVNAYVHSHSTDQALTFLH 113

Query: 1801 EMVNKGLTPRXXXXXXXXXXXXXXXLFEKAWCFFNEKKCMVDLDSYSFGIMIKGCCEVGD 1622
             M+++G  P                 F+KAW  FNE K  V LD+YSFGIMIKGCCE G 
Sbjct: 114  HMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGY 173

Query: 1621 LIKGFELLAQMEKMDLPPTVVTYTTLIDGCCKNGNFNEAKKLFSKMGTVGLVPNEFTYTA 1442
             +KGF LLA +E+  L P VV YTTLIDGCCK+GN   AK LF KM  +GLVPN  TY+ 
Sbjct: 174  FVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSV 233

Query: 1441 MINGYFKEGLKREGLELYEEMKLQGVNPNIYTYNSIIGEYCRNGNLTKAFELFGEMRVKG 1262
            ++NG+FK+GL+REG ++YE MK  G+ PN Y YN +I EYC +G + KAF++F EMR KG
Sbjct: 234  LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293

Query: 1261 VARNVVTFNTLIGGLCRERKPLEAEKIVHRMKKLGLSPNSITYHILLDGFCKVGKLDKAL 1082
            +A  V+T+N LIGGLCR +K  EA K+VH++ K+GLSPN +TY+IL++GFC V K+D A+
Sbjct: 294  IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAV 353

Query: 1081 SLFTQMKESGQTASLVTYNILIVGFSRAGVVEQAAHFVKEMEERGICPSKITYTILIDTF 902
             LF Q+K SG + +LVTYN LI G+S+   +  A   VKEMEER I PSK+TYTILID F
Sbjct: 354  RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 901  VRSGNMEKAFELHSSMEKAGVITDVYVYGVLIHGLCITGNMKDALKLFRLMSEKELKPND 722
             R  + EKA E+HS MEK+G++ DVY Y VL+HGLC+ GNMK+A KLF+ + E  L+PN 
Sbjct: 414  ARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNS 473

Query: 721  VIYNTMIYGYCKQGSSYRALRLLKEMRENGMVPNVASYGLTIAALCKDGKLNEADDLLNE 542
            VIYNTMI+GYCK+GSSYRALRLL EM ++GMVPNVAS+  TI  LC+D K  EA+ LL +
Sbjct: 474  VIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQ 533

Query: 541  MVESGMNPSDSIYSTISKAK 482
            M+ SG+ PS S+Y  + K K
Sbjct: 534  MINSGLKPSVSLYKMVHKVK 553