BLASTX nr result
ID: Aconitum23_contig00021723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00021723
(799 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ERN05236.1| hypothetical protein AMTR_s00007p00082080 [Ambore... 93 2e-16
ref|XP_008786397.1| PREDICTED: pentatricopeptide repeat-containi... 92 3e-16
ref|XP_010249335.1| PREDICTED: retinoblastoma-related protein-li... 91 7e-16
sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote... 91 1e-15
ref|XP_011655942.1| PREDICTED: retinoblastoma-related protein is... 89 3e-15
ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein is... 89 3e-15
ref|XP_010692724.1| PREDICTED: retinoblastoma-related protein is... 89 4e-15
ref|XP_010692723.1| PREDICTED: retinoblastoma-related protein is... 89 4e-15
ref|XP_004966763.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-15
gb|KQL09787.1| hypothetical protein SETIT_008589mg, partial [Set... 80 4e-15
ref|XP_009777341.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-12
ref|XP_010313676.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-12
ref|XP_010273504.1| PREDICTED: pentatricopeptide repeat-containi... 77 1e-11
ref|XP_010273499.1| PREDICTED: pentatricopeptide repeat-containi... 77 1e-11
ref|XP_007160511.1| hypothetical protein PHAVU_002G328000g [Phas... 75 5e-11
ref|XP_002517091.1| pentatricopeptide repeat-containing protein,... 74 9e-11
ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containi... 74 9e-11
ref|XP_009338493.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-10
ref|XP_008372694.1| PREDICTED: pentatricopeptide repeat-containi... 73 2e-10
ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily p... 73 3e-10
>gb|ERN05236.1| hypothetical protein AMTR_s00007p00082080 [Amborella trichopoda]
Length = 641
Score = 93.2 bits (230), Expect = 2e-16
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRERTS-PWNTVISCYC 393
G++ A+ + D+MP++DVV T+++A +H V++AR+LF++M +R WN+++SCY
Sbjct: 85 GRIDDARGVADKMPIKDVVTWTTLLNAFALHSMVADARKLFDEMPQRNQITWNSMLSCYV 144
Query: 392 RVGM*H-WDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGILXXXXX 216
R M H D F S+ C +V++ IM L S +L
Sbjct: 145 RHSMFHDADTLF-----------ESMPCRDVVSWTIM-------LQAYASAKCVLEARRL 186
Query: 215 XXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSW 87
NV SW M+ MYC +G++ R+LFD MP +N VSW
Sbjct: 187 FDKMPERNVVSWTVMIGMYCDSGQVDEARRLFDEMPERNEVSW 229
>ref|XP_008786397.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Phoenix dactylifera]
Length = 579
Score = 92.4 bits (228), Expect = 3e-16
Identities = 60/167 (35%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Frame = -3
Query: 578 SMYGQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRERTS-PWNTVIS 402
S G L +A+QLF+EMP RDV+A+N MI+AL HG +EAR LFE + E++S WN++I+
Sbjct: 57 SKVGCLNAAEQLFEEMPERDVIANNAMIAALSSHGRTTEARRLFESIPEKSSASWNSMIT 116
Query: 401 CYCRVGM*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGILXXX 222
CYC+ +S RE + P+
Sbjct: 117 CYCKEN-------DVSAARE-----------IFDRNPV---------------------- 136
Query: 221 XXXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAM-PRKNVVSWN 84
+V SWN +VD YCK G+L+ R+LFD M KN V+WN
Sbjct: 137 --------KDVVSWNAIVDGYCKMGQLEMARQLFDRMGSAKNSVTWN 175
Score = 60.1 bits (144), Expect = 2e-06
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Frame = -3
Query: 557 SAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQM--RERTSPWNTVISCYCRVG 384
+A+++FD P++DVV+ N ++ G + AR+LF++M + + WNT+IS Y
Sbjct: 126 AAREIFDRNPVKDVVSWNAIVDGYCKMGQLEMARQLFDRMGSAKNSVTWNTMISGYLH-- 183
Query: 383 M*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGILXXXXXXXXX 204
H +VL + +M V V P E++ V +L
Sbjct: 184 -------------------HREFSMVLSLFQVMQV--ENVRPTEVTMVSLL---SACAHL 219
Query: 203 XSMNVSSW-----------------NTMVDMYCKTGELKTTRKLFDAMPRKNVVSWN 84
++N+ W N ++DMY K G + ++F MP KNV WN
Sbjct: 220 GALNMGRWLHAFIRNHRLRIDVILGNALIDMYFKCGIAEAALQVFRGMPMKNVFCWN 276
>ref|XP_010249335.1| PREDICTED: retinoblastoma-related protein-like [Nelumbo nucifera]
Length = 1030
Score = 91.3 bits (225), Expect = 7e-16
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -1
Query: 772 FFKEMPQFVLKAGPVLSNIYGTDWEKRLEAEELQANFVHMSHLSKYYK 629
FFKEMPQF LKAGP+LSN+YG DWEKRLEA+ELQANFVH+S LSKYYK
Sbjct: 124 FFKEMPQFFLKAGPILSNLYGADWEKRLEAKELQANFVHLSLLSKYYK 171
>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein [Camellia sinensis]
gi|89111303|dbj|BAE80326.1| retinoblastoma related
protein [Camellia sinensis]
Length = 1025
Score = 90.5 bits (223), Expect = 1e-15
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = -1
Query: 772 FFKEMPQFVLKAGPVLSNIYGTDWEKRLEAEELQANFVHMSHLSKYYK 629
FFKE+PQF++KAGP+LSN YGTDWEKRLEA+ELQANFVH+S LSKYYK
Sbjct: 123 FFKELPQFIVKAGPILSNQYGTDWEKRLEAKELQANFVHLSLLSKYYK 170
>ref|XP_011655942.1| PREDICTED: retinoblastoma-related protein isoform X1 [Cucumis
sativus]
Length = 1025
Score = 89.4 bits (220), Expect = 3e-15
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = -1
Query: 772 FFKEMPQFVLKAGPVLSNIYGTDWEKRLEAEELQANFVHMSHLSKYYK 629
FFKE+PQFV+KAGPVLSN+YG DWE RLEA+ELQANFVH+S LSKYYK
Sbjct: 122 FFKELPQFVVKAGPVLSNLYGADWENRLEAKELQANFVHLSLLSKYYK 169
>ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein isoform X2 [Cucumis
sativus] gi|700197161|gb|KGN52338.1| hypothetical
protein Csa_5G625980 [Cucumis sativus]
Length = 1024
Score = 89.4 bits (220), Expect = 3e-15
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = -1
Query: 772 FFKEMPQFVLKAGPVLSNIYGTDWEKRLEAEELQANFVHMSHLSKYYK 629
FFKE+PQFV+KAGPVLSN+YG DWE RLEA+ELQANFVH+S LSKYYK
Sbjct: 121 FFKELPQFVVKAGPVLSNLYGADWENRLEAKELQANFVHLSLLSKYYK 168
>ref|XP_010692724.1| PREDICTED: retinoblastoma-related protein isoform X2 [Beta vulgaris
subsp. vulgaris]
Length = 936
Score = 89.0 bits (219), Expect = 4e-15
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = -1
Query: 772 FFKEMPQFVLKAGPVLSNIYGTDWEKRLEAEELQANFVHMSHLSKYYK 629
FFKE+PQFV+K GP+LSN+YG DWEKRLEA+ELQANFVH+S LSKYYK
Sbjct: 120 FFKELPQFVVKVGPILSNMYGADWEKRLEAKELQANFVHLSLLSKYYK 167
>ref|XP_010692723.1| PREDICTED: retinoblastoma-related protein isoform X1 [Beta vulgaris
subsp. vulgaris] gi|870847248|gb|KMS99651.1|
hypothetical protein BVRB_1g022190 [Beta vulgaris subsp.
vulgaris]
Length = 1020
Score = 89.0 bits (219), Expect = 4e-15
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = -1
Query: 772 FFKEMPQFVLKAGPVLSNIYGTDWEKRLEAEELQANFVHMSHLSKYYK 629
FFKE+PQFV+K GP+LSN+YG DWEKRLEA+ELQANFVH+S LSKYYK
Sbjct: 120 FFKELPQFVVKVGPILSNMYGADWEKRLEAKELQANFVHLSLLSKYYK 167
>ref|XP_004966763.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Setaria italica]
Length = 478
Score = 79.7 bits (195), Expect(2) = 4e-15
Identities = 38/63 (60%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRERT-SPWNTVISCYC 393
G L A+ LFDEMP RDVVA N M++ALG G V++ARELF++M ERT + WNT+++CYC
Sbjct: 52 GLLAPAQWLFDEMPRRDVVAFNAMLAALGAAGRVADARELFDRMLERTPASWNTMVTCYC 111
Query: 392 RVG 384
R G
Sbjct: 112 RAG 114
Score = 29.6 bits (65), Expect(2) = 4e-15
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2
Query: 348 SRVIAQTALIDMYCARGLSNHGRLVFDSI--TQRDVICWN 235
S V++ A+ID YC G + R +FD + + DV+ WN
Sbjct: 132 SSVVSWNAMIDGYCKAGRMDAARDLFDRMGSSLPDVVTWN 171
>gb|KQL09787.1| hypothetical protein SETIT_008589mg, partial [Setaria italica]
Length = 453
Score = 79.7 bits (195), Expect(2) = 4e-15
Identities = 38/63 (60%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRERT-SPWNTVISCYC 393
G L A+ LFDEMP RDVVA N M++ALG G V++ARELF++M ERT + WNT+++CYC
Sbjct: 52 GLLAPAQWLFDEMPRRDVVAFNAMLAALGAAGRVADARELFDRMLERTPASWNTMVTCYC 111
Query: 392 RVG 384
R G
Sbjct: 112 RAG 114
Score = 29.6 bits (65), Expect(2) = 4e-15
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2
Query: 348 SRVIAQTALIDMYCARGLSNHGRLVFDSI--TQRDVICWN 235
S V++ A+ID YC G + R +FD + + DV+ WN
Sbjct: 132 SSVVSWNAMIDGYCKAGRMDAARDLFDRMGSSLPDVVTWN 171
>ref|XP_009777341.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Nicotiana sylvestris]
gi|698580630|ref|XP_009777342.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g62890-like [Nicotiana sylvestris]
gi|698580633|ref|XP_009777343.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g62890-like [Nicotiana sylvestris]
gi|698580637|ref|XP_009777344.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g62890-like [Nicotiana sylvestris]
gi|698580640|ref|XP_009777345.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g62890-like [Nicotiana sylvestris]
Length = 795
Score = 79.7 bits (195), Expect = 2e-12
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRER-TSPWNTVISCYC 393
G + AK +FD+MPM++V+A N+MI LG G ++EA +L ++M+E+ W +ISCY
Sbjct: 208 GNVEEAKVIFDKMPMKNVIASNSMIVLLGRSGRMTEACQLLDEMKEKDVVSWTALISCYE 267
Query: 392 RVGM*HWDV*FI--------SVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVG 237
+ GM + S+ ++ + S +LV V L++ S+V
Sbjct: 268 QHGMYKQALDLFMQMCANGTSIDEVVVISVLSACAHLLVVQTGESVHGLVIRVGFESYVN 327
Query: 236 --------------ILXXXXXXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKN 99
+ ++ SWN+M+ Y K G L+ R+LFD MP K+
Sbjct: 328 LQNALIHMYSTCGDVTAAQILFDTSSHLDQISWNSMISGYLKCGSLEKARELFDCMPEKD 387
Query: 98 VVSW 87
VVSW
Sbjct: 388 VVSW 391
>ref|XP_010313676.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Solanum lycopersicum]
Length = 795
Score = 78.6 bits (192), Expect = 5e-12
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 23/184 (12%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELF-EQMRERTSPWNTVISCYC 393
G + AK +FD+MPM++V+A N+MI LG G +SEA +LF E M++ W +ISCY
Sbjct: 208 GNVDEAKVIFDKMPMKNVIASNSMIVLLGRSGRMSEACQLFNEMMQKDVVSWTALISCYE 267
Query: 392 RVGM*HWDV*F--------ISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVG 237
+ GM + IS+ +L + S +LV V L++ S+V
Sbjct: 268 QHGMHTQALDLFMQMCSNGISIDEVVVLSVLSACAHLLVVQTGESVHGLVIRVGFESYVN 327
Query: 236 --------------ILXXXXXXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKN 99
++ ++ SWN+M+ Y K G ++ R+LFD+M K+
Sbjct: 328 LQNALIHMYSTCGDVMAAQRLFDTSSHLDQISWNSMISGYLKCGSVEKARELFDSMAEKD 387
Query: 98 VVSW 87
VVSW
Sbjct: 388 VVSW 391
>ref|XP_010273504.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Nelumbo nucifera]
Length = 756
Score = 77.0 bits (188), Expect = 1e-11
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Frame = -3
Query: 572 YGQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRERTS-PWNTVISCY 396
Y ++ A+++FD+MPMR+VV+ N MIS ++ + EA LFEQM E+ + W T+I+ Y
Sbjct: 248 YSRIDEARRIFDQMPMRNVVSWNAMISGYVLNYQIDEAIILFEQMTEKNAVSWTTMINGY 307
Query: 395 CRVGM*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGILXXXXX 216
R+G + RE LL L + I G + + + +
Sbjct: 308 VRIGK-------LEKARE-LLNLMPYKNVAAQTAMISGYIQTMQMEEARQIFDEM----- 354
Query: 215 XXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWN 84
+ +++ WNTM+ Y + G + KLF M RKN+++WN
Sbjct: 355 ----DTRDIACWNTMIAGYAQCGRMDEANKLFKQMFRKNIITWN 394
Score = 63.2 bits (152), Expect = 2e-07
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRER-TSPWNTVISCYC 393
G++ A+ LF++MP+R++V+ NTMIS + V EA ELFE+M R W +I+CY
Sbjct: 62 GRINDARNLFEQMPLRNLVSWNTMISGYLHNDKVHEAAELFERMSRRDLFSWTLMITCYT 121
Query: 392 RVGM*HWDV*FISVGRE*LLRLHSLIC--IVLVAYPIMGVWCLIVLPKEMSFVGILXXXX 219
R G ++ + + L S +C ++ Y G
Sbjct: 122 RNG----ELEKARILFDQLPDKRSPVCWNAMIAGYAKNG--------------RFEDARR 163
Query: 218 XXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWNV 81
N+ SWN+M+ Y + E+ FD M ++VVSWN+
Sbjct: 164 LFDKMPVRNLVSWNSMLAAYIQNEEMGLALDFFDKMSERDVVSWNL 209
Score = 59.7 bits (143), Expect = 2e-06
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Frame = -3
Query: 608 LFKVNVEI*C-SMYGQLRSAKQLFDEMP-MRDVVAHNTMISALGMHGYVSEARELFEQMR 435
LF + I C + G+L A+ LFD++P R V N MI+ +G +AR LF++M
Sbjct: 110 LFSWTLMITCYTRNGELEKARILFDQLPDKRSPVCWNAMIAGYAKNGRFEDARRLFDKMP 169
Query: 434 ERTS-PWNTVISCYCRVGM*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLP 258
R WN++++ Y + + F E + +L+ I G + L
Sbjct: 170 VRNLVSWNSMLAAYIQNEEMGLALDFFDKMSERDVVSWNLV--------IDGFMQIGDLD 221
Query: 257 KEMSFVGILXXXXXXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWN 84
M F + S NV SW TM+ + + + R++FD MP +NVVSWN
Sbjct: 222 SAMQFFQRIP---------SPNVISWVTMLSGFARYSRIDEARRIFDQMPMRNVVSWN 270
>ref|XP_010273499.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Nelumbo nucifera]
gi|720055813|ref|XP_010273500.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Nelumbo nucifera]
gi|720055817|ref|XP_010273501.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Nelumbo nucifera]
gi|720055820|ref|XP_010273502.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Nelumbo nucifera]
gi|720055823|ref|XP_010273503.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Nelumbo nucifera]
Length = 756
Score = 77.0 bits (188), Expect = 1e-11
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Frame = -3
Query: 572 YGQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRERTS-PWNTVISCY 396
Y ++ A+++FD+MPMR+VV+ N MIS ++ + EA LFEQM E+ + W T+I+ Y
Sbjct: 248 YSRIDEARRIFDQMPMRNVVSWNAMISGYVLNYQIDEAIILFEQMTEKNAVSWTTMINGY 307
Query: 395 CRVGM*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGILXXXXX 216
R+G + RE LL L + I G + + + +
Sbjct: 308 VRIGK-------LEKARE-LLNLMPYKNVAAQTAMISGYIQTMQMEEARQIFDEM----- 354
Query: 215 XXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWN 84
+ +++ WNTM+ Y + G + KLF M RKN+++WN
Sbjct: 355 ----DTRDIACWNTMIAGYAQCGRMDEANKLFKQMFRKNIITWN 394
Score = 63.2 bits (152), Expect = 2e-07
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRER-TSPWNTVISCYC 393
G++ A+ LF++MP+R++V+ NTMIS + V EA ELFE+M R W +I+CY
Sbjct: 62 GRINDARNLFEQMPLRNLVSWNTMISGYLHNDKVHEAAELFERMSRRDLFSWTLMITCYT 121
Query: 392 RVGM*HWDV*FISVGRE*LLRLHSLIC--IVLVAYPIMGVWCLIVLPKEMSFVGILXXXX 219
R G ++ + + L S +C ++ Y G
Sbjct: 122 RNG----ELEKARILFDQLPDKRSPVCWNAMIAGYAKNG--------------RFEDARR 163
Query: 218 XXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWNV 81
N+ SWN+M+ Y + E+ FD M ++VVSWN+
Sbjct: 164 LFDKMPVRNLVSWNSMLAAYIQNEEMGLALDFFDKMSERDVVSWNL 209
Score = 59.7 bits (143), Expect = 2e-06
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Frame = -3
Query: 608 LFKVNVEI*C-SMYGQLRSAKQLFDEMP-MRDVVAHNTMISALGMHGYVSEARELFEQMR 435
LF + I C + G+L A+ LFD++P R V N MI+ +G +AR LF++M
Sbjct: 110 LFSWTLMITCYTRNGELEKARILFDQLPDKRSPVCWNAMIAGYAKNGRFEDARRLFDKMP 169
Query: 434 ERTS-PWNTVISCYCRVGM*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLP 258
R WN++++ Y + + F E + +L+ I G + L
Sbjct: 170 VRNLVSWNSMLAAYIQNEEMGLALDFFDKMSERDVVSWNLV--------IDGFMQIGDLD 221
Query: 257 KEMSFVGILXXXXXXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWN 84
M F + S NV SW TM+ + + + R++FD MP +NVVSWN
Sbjct: 222 SAMQFFQRIP---------SPNVISWVTMLSGFARYSRIDEARRIFDQMPMRNVVSWN 270
>ref|XP_007160511.1| hypothetical protein PHAVU_002G328000g [Phaseolus vulgaris]
gi|561033926|gb|ESW32505.1| hypothetical protein
PHAVU_002G328000g [Phaseolus vulgaris]
Length = 691
Score = 75.1 bits (183), Expect = 5e-11
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Frame = -3
Query: 566 QLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRERTS-PWNTVISCYCR 390
+LR A+ LFD MP +DVV+ N M+S G+V EARE+F++M + S WN +++ Y R
Sbjct: 51 RLRDARVLFDSMPQKDVVSWNAMLSGYVRSGHVDEAREVFDKMPHKNSISWNGLLAAYVR 110
Query: 389 VGM*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGILXXXXXXX 210
G L SL+ + ++ CL+ + S +G
Sbjct: 111 SGR---------------LEEGSLLFESKSDWELISWNCLMGGYVKRSMLG--DARLLFD 153
Query: 209 XXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSW 87
+V SWNTM+ Y + G+L R+LF+ P ++V +W
Sbjct: 154 QMPIRDVVSWNTMISGYAQDGDLSQARRLFEESPVRDVFTW 194
Score = 53.9 bits (128), Expect(2) = 7e-07
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMR-ERTSPWNTVISCYC 393
G L A+++F+EMP R +++N MI+ + + ARELFE+M WN +ISCYC
Sbjct: 205 GMLDEARRVFNEMPQRREMSYNAMIAGYVQYKRMDMARELFEEMPFPNIGSWNIMISCYC 264
Query: 392 RVG 384
+ G
Sbjct: 265 QEG 267
Score = 27.3 bits (59), Expect(2) = 7e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 324 LIDMYCARGLSNHGRLVFDSITQRDVICW 238
+I YC G R +FD + QRD + W
Sbjct: 259 MISCYCQEGDVAQARNLFDRMPQRDSVSW 287
>ref|XP_002517091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543726|gb|EEF45254.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 606
Score = 74.3 bits (181), Expect = 9e-11
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Frame = -3
Query: 578 SMYGQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRERTSPWN----- 414
S++G L A+++FDE P RDVV+ +MI H Y ++A +LF+ M N
Sbjct: 304 SVHGCLVLARKVFDETPARDVVSWTSMIDGYSTHDYYTDALKLFDSMLLSDVEPNEVTMI 363
Query: 413 TVISCYCRVGM*HWDV*FISVGRE*--LLRLHSLICIVLVAYPIMGVW----CLIVLPKE 252
+V+S + G +S+G+ +R +L V + I+ ++ CL+ +
Sbjct: 364 SVLSACSQKGD-------LSLGKSIHEYVRRKNLNLSVNLMNAILDMYVKCGCLVAAREI 416
Query: 251 MSFVGILXXXXXXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWN 84
+G + +V SW +MV+ Y KTGEL+ RK FD MP++NVVSWN
Sbjct: 417 FDSMG------------TKDVFSWTSMVNGYAKTGELEIARKFFDDMPKRNVVSWN 460
>ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 536
Score = 74.3 bits (181), Expect = 9e-11
Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRERTS-PWNTVISCYC 393
G L SA+++F EMP RDV+A N MISA +G V EA++LFE M +R S WN++I+CYC
Sbjct: 21 GDLGSARKVFVEMPERDVIATNAMISAFSRYGCVEEAKQLFENMSQRNSASWNSLITCYC 80
Query: 392 RVGM*H-WDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGILXXXXX 216
+ H + F + ++ +++I + ++ L V EM F+
Sbjct: 81 KSSEVHNARLIFDRNPMKDVVSWNAMIDGYCKSEQMVKADELFV---EMEFM-------- 129
Query: 215 XXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNV 96
NV +WNTM+ Y + GE LF M R+ V
Sbjct: 130 ------KNVVTWNTMIAGYVQCGEFVRAINLFQRMLREEV 163
>ref|XP_009338493.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Pyrus x bretschneideri]
Length = 906
Score = 73.6 bits (179), Expect = 2e-10
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Frame = -3
Query: 578 SMYGQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRER-TSPWNTVIS 402
S G+ A+Q+F+ MP RD + NTMIS +G++++A+ELF+ R++ W ++S
Sbjct: 36 SQLGRATDARQVFERMPHRDSGSWNTMISGYIQNGHLNKAQELFDSFRDKNVRTWTILLS 95
Query: 401 CYCRVGM*HWD---V*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGIL 231
Y + G H D F S+ ++ ++++ AY G L+ +E+
Sbjct: 96 GYAKYG--HADEARAAFESMPERNVVSWNAMV----TAYAQNG---LLNSAREV------ 140
Query: 230 XXXXXXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWNV 81
NV SWN+M+ YC+ G + R+LFD M +N+ SW V
Sbjct: 141 -----FDQMPERNVVSWNSMITGYCRCGRMNVARELFDQMEDRNITSWMV 185
>ref|XP_008372694.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Malus domestica]
Length = 906
Score = 73.2 bits (178), Expect = 2e-10
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Frame = -3
Query: 578 SMYGQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRER-TSPWNTVIS 402
S G+L A+Q+F+ MP RD + NTMISA +G++++A+ELF+ R++ W ++S
Sbjct: 36 SQLGRLTDARQVFERMPQRDSGSWNTMISAYIQNGHLNKAQELFDSFRDKNVRTWTILLS 95
Query: 401 CYCRVG-M*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGILXX 225
Y + G F S+ ++ +++I AY G+ +
Sbjct: 96 GYAKHGHAGEAQAVFESMPERNVVSWNAMI----TAYTQNGL--------------LNSA 137
Query: 224 XXXXXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWNV 81
N+ SWN+++ YC+ G + R+LFD M +N+ SW V
Sbjct: 138 RDVFDQMPERNIVSWNSIITGYCRCGRINVARELFDQMEDRNIASWMV 185
>ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 1 [Theobroma cacao]
gi|590635100|ref|XP_007028548.1| Pentatricopeptide
repeat (PPR) superfamily protein, putative isoform 1
[Theobroma cacao] gi|508717152|gb|EOY09049.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508717153|gb|EOY09050.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 1 [Theobroma
cacao]
Length = 631
Score = 72.8 bits (177), Expect = 3e-10
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Frame = -3
Query: 569 GQLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRER-TSPWNTVISCYC 393
G + A +LF EMP R+VV+ NTM++AL G V +AR LF++M +R W +++
Sbjct: 156 GMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVAGLA 215
Query: 392 RVGM*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIVLPKEMSFVGILXXXXXX 213
+ G I R R+ + A I G + L + +
Sbjct: 216 KNGK-------IDEARRVFDRMPERNVVSWNAM-ITGYSQNMKLDEAFELFERMP----- 262
Query: 212 XXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSW 87
N+SSWN M+ + + GELK KLFD +PRKNVVSW
Sbjct: 263 ----ERNLSSWNAMITGFIQNGELKRAEKLFDKVPRKNVVSW 300
Score = 65.1 bits (157), Expect = 6e-08
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Frame = -3
Query: 566 QLRSAKQLFDEMPMRDVVAHNTMISALGMHGYVSEARELFEQMRER-TSPWNTVISCYCR 390
++ AK+LFDEMP+++VV+ NTM+ +G V +A ELF++M ER WNT+++ +
Sbjct: 126 RILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTMLTALAQ 185
Query: 389 VGM*HWDV*FISVGRE*LLRLHSLICIVLVAYPIMGVWCLIV--LPKEMSFVGILXXXXX 216
G + R R+ I W +V L K I
Sbjct: 186 CGR-------VEDARGLFDRMPKRDVI---------SWTAMVAGLAKNGK---IDEARRV 226
Query: 215 XXXXXSMNVSSWNTMVDMYCKTGELKTTRKLFDAMPRKNVVSWN 84
NV SWN M+ Y + +L +LF+ MP +N+ SWN
Sbjct: 227 FDRMPERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWN 270