BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00021563
         (2030 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polyme...   890   0.0  
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   836   0.0  
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   831   0.0  
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   831   0.0  
ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   827   0.0  
ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   827   0.0  
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   824   0.0  
ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   808   0.0  
ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   808   0.0  
ref|XP_010093320.1| RNA-dependent RNA polymerase 1 [Morus notabi...   798   0.0  
gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gos...   793   0.0  
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      793   0.0  
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   793   0.0  
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      790   0.0  
ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [G...   789   0.0  
ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polyme...   788   0.0  
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   786   0.0  
ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polyme...   777   0.0  
ref|XP_010670368.1| PREDICTED: RNA-dependent RNA polymerase 1 [B...   776   0.0  
emb|CDP05596.1| unnamed protein product [Coffea canephora]            772   0.0  

>ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962527|ref|XP_010275424.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962530|ref|XP_010275500.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962533|ref|XP_010275583.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962536|ref|XP_010275643.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962539|ref|XP_010275710.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
          Length = 1136

 Score =  890 bits (2300), Expect = 0.0
 Identities = 445/653 (68%), Positives = 523/653 (80%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TI +SGFP+ VTA  VKE LE + G+GTVYALK+R  KNKG    AF +VQFTT+ +
Sbjct: 1    MGKTIHLSGFPANVTAEAVKELLERYTGDGTVYALKVRHHKNKGHARFAFVIVQFTTSGS 60

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            A+ + SL+NR L YG+  LKV ++ERDIV KPR+++LSL+ T LHFGCQVS E+F VLWK
Sbjct: 61   ADVITSLVNRRLYYGTHYLKVRDVERDIVAKPRMSLLSLEHTTLHFGCQVSPEKFSVLWK 120

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              +V V F FG R++   +S   IDYKL LSY++IWQIQLR P+  + KFL+IQ+ G PR
Sbjct: 121  GADVAVRFEFGLRRLHFFLSQFPIDYKLGLSYENIWQIQLRHPRGQNKKFLLIQMFGVPR 180

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            I++K+  +  ++F D  LNYFR+ PDDQW RTTDFT   CIGQ SALCLELP S +L NI
Sbjct: 181  IFKKVKISLENMFEDPILNYFRE-PDDQWDRTTDFTPLCCIGQSSALCLELPYSYVLPNI 239

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            RE F YY+ED+GPF+LESG TFS S  LVP+VGP QG ++PY I FKV  LVQNGCL+GP
Sbjct: 240  REYFAYYKEDEGPFVLESGATFSRSLSLVPIVGPSQGSDIPYEILFKVCSLVQNGCLSGP 299

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
            TLDAAFFRLV P +I I +IE ALEKLYHLKECCYEPV WL +QY+ Y     P + P I
Sbjct: 300  TLDAAFFRLVDPNFISIDYIENALEKLYHLKECCYEPVNWLTKQYRAYCTLKRPPKLPSI 359

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLDDGLVY+RRIQITP KVYFCGP++ VSNRV+R Y +YIDNFIRIS VDED +K+ + D
Sbjct: 360  SLDDGLVYVRRIQITPCKVYFCGPEVIVSNRVLREYSRYIDNFIRISFVDEDLDKIHSTD 419

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            +SPR TS   ++ HT IY RI+S LKNGIVIGDKKFDFLAFSSSQLR+NSAWMFAS NG 
Sbjct: 420  ISPR-TSFANEKGHTEIYDRILSTLKNGIVIGDKKFDFLAFSSSQLRDNSAWMFASSNGY 478

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR+WMGDF +IRNVAKYAARLGQSFSSS ETL V  HETEII D+++E  G +Y+F
Sbjct: 479  TAASIRQWMGDFSKIRNVAKYAARLGQSFSSSRETLNVYEHETEIIDDIKVEWRGIEYIF 538

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS DFA++VAKKCG  G  PS+FQIRYGGYKGVVAVDP S KKLSLRRSMSKY 
Sbjct: 539  SDGIGKISADFAKQVAKKCGFKGSFPSAFQIRYGGYKGVVAVDPTSTKKLSLRRSMSKYE 598

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL+WSK+QPCFLNRQIITLLSTLGV DS+FEKKQKE +DQLD ILT
Sbjct: 599  SRNTKLDVLSWSKYQPCFLNRQIITLLSTLGVRDSIFEKKQKEAMDQLDAILT 651


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  836 bits (2159), Expect = 0.0
 Identities = 412/653 (63%), Positives = 507/653 (77%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            MS+T++VSGFPS  TA  V+ FLESH G GTV ALKIR+ +  G   R +A+VQFTT + 
Sbjct: 1    MSKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGA--RKYAIVQFTTTRA 58

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE + SL N  L YG S L    M+RDI+P+PR  + +++   LHFG Q S E+F  +W 
Sbjct: 59   AEQIISLANPRLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWS 118

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV VNFG G RK+   +SH+  +YKL+L +++IWQI+L +P+    K+L+IQ+ GAPR
Sbjct: 119  GNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPR 178

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYE+ + +S+++F D  LNYFRD PD+QWVRTTDFT S  IG  S+LCLELP    L N 
Sbjct: 179  IYERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNF 238

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
             ENF YY+E++G F+LESG TFS + +LVP+VGP  G+ LPYNI F+VN LVQNGCLAG 
Sbjct: 239  NENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGS 298

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD  F+RLV P  +P+  IEYALEKLYHLKECCYEP KW  EQYK+Y  S NP RSP +
Sbjct: 299  MLDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVL 358

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD GLVY+ ++QITP KV+FCGP++NVSNRV+R Y + IDNF+R+S VDE+ EK+ + D
Sbjct: 359  SLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTD 418

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            +SPR +S++E R+ TAIY RI+S L+NGIVIGDKKF+FLAFSSSQLRENS WMFAS  G+
Sbjct: 419  VSPRTSSRNELRR-TAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGL 477

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR WMG FH+IRNVA+YAARLGQSF SSTETL+V +HE EIIPD+E+ + G +Y+F
Sbjct: 478  TAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLF 537

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS +FAR+VA KCG  GFTPS+FQIRY GYKGVVAVDP S KKLSLRRSM KY 
Sbjct: 538  SDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYE 597

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL  SK+QPCFLNRQ+ITLLSTLGV D  FE+KQ+E VDQLD +LT
Sbjct: 598  SENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAMLT 650


>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
            euphratica]
          Length = 1132

 Score =  831 bits (2147), Expect = 0.0
 Identities = 408/653 (62%), Positives = 506/653 (77%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            MS+T+QVSGFPS  TA  V+ FLES+ G GTV ALKIR+ + +G   R +A+VQFTT + 
Sbjct: 1    MSKTVQVSGFPSSATAGAVQVFLESYTGGGTVEALKIRETRTRGA--RKYAIVQFTTTRA 58

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
             E + SL N+ L YG S L    M+RDI+P+PR ++ +++   LHFG Q S E+F  +W 
Sbjct: 59   TEQIISLANQRLWYGRSYLNARPMDRDIIPQPRSSLHTMESVTLHFGYQTSKEKFSAVWS 118

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV VNFG G RK+   +SH+  +YKL+L +++IWQI+L +P+    K+L+IQ+ GAPR
Sbjct: 119  GNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPR 178

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYE+ + +S ++F D  LNYFRD PD+QWVRTTDFT S  IG  S+LCLELP    L N 
Sbjct: 179  IYEREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPSCSIGHSSSLCLELPSHLQLPNF 238

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
             ENF YY+E++G F+LESG TFS + +LVP+VGP  G+ LPYNI F+VN LVQNGCLAG 
Sbjct: 239  NENFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGS 298

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD  F+RLV P  +P+  IE+ALEKLYHLKECCYEP KW  EQY++Y  S NP RSP +
Sbjct: 299  MLDDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPSKWFNEQYRKYLTSGNPPRSPVL 358

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD GLVY+ ++QITP KV+FCGP++N+SNRV+R Y + IDNF+R+S VDE+ EK+ + D
Sbjct: 359  SLDAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVSFVDEELEKIHSTD 418

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            +SPR +S++E R+ TAIY RI+S L+NGIVIGDKKF+FLAFSSSQLRENS WMFAS  G+
Sbjct: 419  VSPRTSSRNELRR-TAIYNRILSTLRNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGL 477

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR WMG FH+IRNVA+YAARLGQSFSSSTETL+V  HE EII D+E+ + G +Y+F
Sbjct: 478  TAADIRRWMGSFHQIRNVARYAARLGQSFSSSTETLSVSRHEIEIISDIEVSRGGTRYLF 537

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS +FAR+VA KCG  GFTPS+FQIRY GYKGVVAVDP S KKLSLR SM KY 
Sbjct: 538  SDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSTKKLSLRMSMFKYE 597

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL  SK+QPCFLNRQ+ITLLSTLGV D  FE+KQ+E VDQLD ILT
Sbjct: 598  SENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAILT 650


>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
            euphratica]
          Length = 1132

 Score =  831 bits (2147), Expect = 0.0
 Identities = 408/653 (62%), Positives = 506/653 (77%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            MS+T+QVSGFPS  TA  V+ FLES+ G GTV ALKIR+ + +G   R +A+VQFTT + 
Sbjct: 1    MSKTVQVSGFPSSATAGAVQVFLESYTGGGTVEALKIRETRTRGA--RKYAIVQFTTTRA 58

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
             E + SL N+ L YG S L    M+RDI+P+PR ++ +++   LHFG Q S E+F  +W 
Sbjct: 59   TEQIISLANQRLWYGRSYLNARPMDRDIIPQPRSSLHTMESVTLHFGYQTSKEKFSAVWS 118

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV VNFG G RK+   +SH+  +YKL+L +++IWQI+L +P+    K+L+IQ+ GAPR
Sbjct: 119  GNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPR 178

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYE+ + +S ++F D  LNYFRD PD+QWVRTTDFT S  IG  S+LCLELP    L N 
Sbjct: 179  IYEREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPSCSIGHSSSLCLELPSHLQLPNF 238

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
             ENF YY+E++G F+LESG TFS + +LVP+VGP  G+ LPYNI F+VN LVQNGCLAG 
Sbjct: 239  NENFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGS 298

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD  F+RLV P  +P+  IE+ALEKLYHLKECCYEP KW  EQY++Y  S NP RSP +
Sbjct: 299  MLDDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPSKWFNEQYRKYLTSGNPPRSPVL 358

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD GLVY+ ++QITP KV+FCGP++N+SNRV+R Y + IDNF+R+S VDE+ EK+ + D
Sbjct: 359  SLDAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVSFVDEELEKIHSTD 418

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            +SPR +S++E R+ TAIY RI+S L+NGIVIGDKKF+FLAFSSSQLRENS WMFAS  G+
Sbjct: 419  VSPRTSSRNELRR-TAIYNRILSTLRNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGL 477

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR WMG FH+IRNVA+YAARLGQSFSSSTETL+V  HE EII D+E+ + G +Y+F
Sbjct: 478  TAADIRRWMGSFHQIRNVARYAARLGQSFSSSTETLSVSRHEIEIISDIEVSRGGTRYLF 537

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS +FAR+VA KCG  GFTPS+FQIRY GYKGVVAVDP S KKLSLR SM KY 
Sbjct: 538  SDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSTKKLSLRMSMFKYE 597

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL  SK+QPCFLNRQ+ITLLSTLGV D  FE+KQ+E VDQLD ILT
Sbjct: 598  SENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAILT 650


>ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
            curcas] gi|802596568|ref|XP_012072322.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
            curcas] gi|802596570|ref|XP_012072324.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
            curcas]
          Length = 1127

 Score =  827 bits (2137), Expect = 0.0
 Identities = 409/653 (62%), Positives = 513/653 (78%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQV GFPS+VT   VK+FLESH+GEGTV+A+KIR+ KN+G   R +A+VQF T ++
Sbjct: 1    MGKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETKNRGR--RKYAIVQFQTARD 58

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE + SL N+ L+YG+S LK   ++ DIVPKPR  + S+D   LHFGCQ+S E+F VLW 
Sbjct: 59   AELIISLTNKRLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWT 118

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV VNFGFG RK++  +SH  + YKL+LSY+++WQ++L  P+    K+L+IQ+ GAPR
Sbjct: 119  GTNVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLIQLYGAPR 178

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            I+EK I+T  ++F     N  +DTPD+QWVRT DFT    IG  S LCLE P S  +   
Sbjct: 179  IFEKEIATF-NVFEIPLFNDLKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKF 237

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            +ENF YY+E +G F+LE+G  FS + +LVP+VGPP G++LP+ I F+VN LVQNGCL G 
Sbjct: 238  QENFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSGVDLPFEILFRVNLLVQNGCLPGS 297

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD++F+ LV P  + I  IE+AL+KL+HLKECCY+P +WL EQY++Y +S    RSP I
Sbjct: 298  ALDSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDPSRWLDEQYRKYLKSKCHPRSPSI 357

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SL  GLVY+RR+QITP KVYFCGP++NVSNRVIRHY K I+NF+R+S VDE+ EK+ + D
Sbjct: 358  SLGSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRHYSKDINNFLRVSFVDEELEKIYSTD 417

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            L PRA+S + DR+ TAIY+RI+S L+NGIVIG+K+F+FLAFSSSQLRENS WMFAS +G+
Sbjct: 418  LCPRASSGNGDRR-TAIYKRILSTLQNGIVIGNKRFEFLAFSSSQLRENSCWMFASRDGL 476

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IREWMG+F +IRNVAKYAARLGQSF SSTETL+V  +E EI+PDVE+E+   KY+F
Sbjct: 477  TAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVSRNEIEILPDVEVERGRTKYLF 536

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS +FARRVA KCG  GF PS+FQIRYGGYKGVVAVDP S KKLSLR SM KY 
Sbjct: 537  SDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKGVVAVDPTSSKKLSLRESMCKYE 596

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL +SK+QPCFLNRQ+ITLLSTLGV D +FEKKQ+E VDQLD ILT
Sbjct: 597  SENTKLDVLGYSKYQPCFLNRQMITLLSTLGVADHIFEKKQREAVDQLDAILT 649


>ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
            curcas]
          Length = 1144

 Score =  827 bits (2137), Expect = 0.0
 Identities = 409/653 (62%), Positives = 513/653 (78%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQV GFPS+VT   VK+FLESH+GEGTV+A+KIR+ KN+G   R +A+VQF T ++
Sbjct: 18   MGKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETKNRGR--RKYAIVQFQTARD 75

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE + SL N+ L+YG+S LK   ++ DIVPKPR  + S+D   LHFGCQ+S E+F VLW 
Sbjct: 76   AELIISLTNKRLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWT 135

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV VNFGFG RK++  +SH  + YKL+LSY+++WQ++L  P+    K+L+IQ+ GAPR
Sbjct: 136  GTNVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLIQLYGAPR 195

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            I+EK I+T  ++F     N  +DTPD+QWVRT DFT    IG  S LCLE P S  +   
Sbjct: 196  IFEKEIATF-NVFEIPLFNDLKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKF 254

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            +ENF YY+E +G F+LE+G  FS + +LVP+VGPP G++LP+ I F+VN LVQNGCL G 
Sbjct: 255  QENFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSGVDLPFEILFRVNLLVQNGCLPGS 314

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD++F+ LV P  + I  IE+AL+KL+HLKECCY+P +WL EQY++Y +S    RSP I
Sbjct: 315  ALDSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDPSRWLDEQYRKYLKSKCHPRSPSI 374

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SL  GLVY+RR+QITP KVYFCGP++NVSNRVIRHY K I+NF+R+S VDE+ EK+ + D
Sbjct: 375  SLGSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRHYSKDINNFLRVSFVDEELEKIYSTD 434

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            L PRA+S + DR+ TAIY+RI+S L+NGIVIG+K+F+FLAFSSSQLRENS WMFAS +G+
Sbjct: 435  LCPRASSGNGDRR-TAIYKRILSTLQNGIVIGNKRFEFLAFSSSQLRENSCWMFASRDGL 493

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IREWMG+F +IRNVAKYAARLGQSF SSTETL+V  +E EI+PDVE+E+   KY+F
Sbjct: 494  TAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVSRNEIEILPDVEVERGRTKYLF 553

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS +FARRVA KCG  GF PS+FQIRYGGYKGVVAVDP S KKLSLR SM KY 
Sbjct: 554  SDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKGVVAVDPTSSKKLSLRESMCKYE 613

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL +SK+QPCFLNRQ+ITLLSTLGV D +FEKKQ+E VDQLD ILT
Sbjct: 614  SENTKLDVLGYSKYQPCFLNRQMITLLSTLGVADHIFEKKQREAVDQLDAILT 666


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  824 bits (2128), Expect = 0.0
 Identities = 417/653 (63%), Positives = 507/653 (77%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQVS FPS V A  VK FLE + G+ TVYALKIRQ KN G   RA+A+VQFT + +
Sbjct: 1    MGKTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGG---RAYAIVQFTKSTD 57

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE +  L N+ L YGSS LK   ME DIVPKPR  + +++   LHFGCQVS+E+F+VLW+
Sbjct: 58   AELIIRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWE 117

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              +V VNFG G RK++ L+SH  ++Y+LDL Y++IWQI+L +P++  +K+L+IQ+ GAPR
Sbjct: 118  EVDVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPR 177

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYEK + +S  +F +  LNYF D PDDQWVRTTDFT S CIGQ S LCLELP    L N 
Sbjct: 178  IYEKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNF 237

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            RENF YY+E +G F+LESG ++S +  LVP+VGP  G++LPY I FK+N LVQNGC+ GP
Sbjct: 238  RENFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGP 297

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LDA F+RLV+P  I   +I++ALEKLY+LKECC+EP KWL EQYK Y  S     SP I
Sbjct: 298  ALDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGSPVI 357

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLDDGLV +RR+QITP++VYFCGP+INVSNRV+RH+H  IDNF+RI+ VDE+ EK+ + D
Sbjct: 358  SLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHDDIDNFLRITFVDEELEKIHSTD 417

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            L  R        + T IY RI+S LKNGIVIGDK+F+FLAFSSSQLRENSAWMFAS  G+
Sbjct: 418  LLTR-------NRITEIYGRILSTLKNGIVIGDKQFEFLAFSSSQLRENSAWMFASREGL 470

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR WMG+F +IRNVAKYAARLGQSFSSSTETL+V   E EII DVEI+++G  YVF
Sbjct: 471  TAADIRTWMGEFSKIRNVAKYAARLGQSFSSSTETLSVAKDEIEIIDDVEIKRDGINYVF 530

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS  FA++VA KC +NG TPS+FQIR GG+KGVVAVDP S KKLSLR SMSKY 
Sbjct: 531  SDGIGKISAKFAKKVAAKCRLNGRTPSAFQIRIGGFKGVVAVDPTSSKKLSLRGSMSKYE 590

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL WSK+QPCFLNRQ+ITLLSTLGV D  FE+KQ+E VDQL+ ILT
Sbjct: 591  SENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDHAFEEKQREVVDQLNAILT 643


>ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
            curcas] gi|802596581|ref|XP_012072328.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
            curcas]
          Length = 1126

 Score =  808 bits (2087), Expect = 0.0
 Identities = 403/653 (61%), Positives = 505/653 (77%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TI V GFP  VT   VK+ LESH+G+GTV+A+KIR+ KN G   R +A+VQF T ++
Sbjct: 1    MGKTIHVYGFPPDVTVDEVKKCLESHSGDGTVFAMKIRETKNGGQ--RKYAIVQFQTARD 58

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE + SL N+ ++YG+S LK   + +DIVP PR  + S+D   LHFGC++S E+F VLW 
Sbjct: 59   AELIISL-NKRIRYGTSYLKARTLAKDIVPNPRTFLHSMDHITLHFGCRISKEKFSVLWT 117

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV VNFGFG RK++  +SH  +DYKLDLSY+++WQI+L  P+    K+L+IQ+ GAPR
Sbjct: 118  GTNVSVNFGFGLRKLQFFLSHEQMDYKLDLSYENVWQIELHCPRGRSVKYLLIQLYGAPR 177

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            I+EK I++S ++F     NYF+DTPD+QWVRT DFT    IG  S LCLE P S  +   
Sbjct: 178  IFEKEIASS-NVFESPLFNYFKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKF 236

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            +ENF YY+E +  F+LE+G  FS + +LVP+VGPP G++LP+ I F+VN LVQ+GCL G 
Sbjct: 237  QENFSYYKESEAIFVLENGNAFSCNLDLVPIVGPPSGVDLPFEILFRVNLLVQHGCLPGS 296

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD++F++LV P  + I  IE+ALEKL+HLKECCYEP  WL EQY++Y  S    RSP I
Sbjct: 297  ALDSSFYKLVDPSRMNIDCIEHALEKLFHLKECCYEPSMWLNEQYRKYLTSKYLPRSPSI 356

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD GL Y+RR QITP K YFCGP++NVSNRVIR Y K I+NF+R+S VDE+  K+ + D
Sbjct: 357  SLDTGLEYVRRGQITPCKAYFCGPEVNVSNRVIRRYSKDINNFLRVSFVDEELGKIHSTD 416

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            LSPRA+S + DR+ TAIY RI+S L+NGIVIG+K+F+FLAFSSSQLRENS WMFAS +G+
Sbjct: 417  LSPRASSGNGDRR-TAIYNRILSTLQNGIVIGNKRFEFLAFSSSQLRENSCWMFASRDGL 475

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IREWMG+F +IRNVAKYAARLGQSF SSTETL+V  ++ EI+PD+E E+   KY+F
Sbjct: 476  TAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVRRNQIEILPDIEAERGRTKYLF 535

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS +FARRVA KCG  GF PS+FQIRYGGYKGVVAVDP S KKLSLR+SM KY 
Sbjct: 536  SDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMCKYE 595

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL +SK+QPCFLNRQ+ITLLSTLGV D +FEKKQ+E VDQLD ILT
Sbjct: 596  SENTKLDVLGYSKYQPCFLNRQMITLLSTLGVPDHIFEKKQREAVDQLDAILT 648


>ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
            curcas]
          Length = 1150

 Score =  808 bits (2087), Expect = 0.0
 Identities = 403/653 (61%), Positives = 505/653 (77%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TI V GFP  VT   VK+ LESH+G+GTV+A+KIR+ KN G   R +A+VQF T ++
Sbjct: 25   MGKTIHVYGFPPDVTVDEVKKCLESHSGDGTVFAMKIRETKNGGQ--RKYAIVQFQTARD 82

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE + SL N+ ++YG+S LK   + +DIVP PR  + S+D   LHFGC++S E+F VLW 
Sbjct: 83   AELIISL-NKRIRYGTSYLKARTLAKDIVPNPRTFLHSMDHITLHFGCRISKEKFSVLWT 141

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV VNFGFG RK++  +SH  +DYKLDLSY+++WQI+L  P+    K+L+IQ+ GAPR
Sbjct: 142  GTNVSVNFGFGLRKLQFFLSHEQMDYKLDLSYENVWQIELHCPRGRSVKYLLIQLYGAPR 201

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            I+EK I++S ++F     NYF+DTPD+QWVRT DFT    IG  S LCLE P S  +   
Sbjct: 202  IFEKEIASS-NVFESPLFNYFKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKF 260

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            +ENF YY+E +  F+LE+G  FS + +LVP+VGPP G++LP+ I F+VN LVQ+GCL G 
Sbjct: 261  QENFSYYKESEAIFVLENGNAFSCNLDLVPIVGPPSGVDLPFEILFRVNLLVQHGCLPGS 320

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD++F++LV P  + I  IE+ALEKL+HLKECCYEP  WL EQY++Y  S    RSP I
Sbjct: 321  ALDSSFYKLVDPSRMNIDCIEHALEKLFHLKECCYEPSMWLNEQYRKYLTSKYLPRSPSI 380

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD GL Y+RR QITP K YFCGP++NVSNRVIR Y K I+NF+R+S VDE+  K+ + D
Sbjct: 381  SLDTGLEYVRRGQITPCKAYFCGPEVNVSNRVIRRYSKDINNFLRVSFVDEELGKIHSTD 440

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            LSPRA+S + DR+ TAIY RI+S L+NGIVIG+K+F+FLAFSSSQLRENS WMFAS +G+
Sbjct: 441  LSPRASSGNGDRR-TAIYNRILSTLQNGIVIGNKRFEFLAFSSSQLRENSCWMFASRDGL 499

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IREWMG+F +IRNVAKYAARLGQSF SSTETL+V  ++ EI+PD+E E+   KY+F
Sbjct: 500  TAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVRRNQIEILPDIEAERGRTKYLF 559

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS +FARRVA KCG  GF PS+FQIRYGGYKGVVAVDP S KKLSLR+SM KY 
Sbjct: 560  SDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKGVVAVDPTSSKKLSLRKSMCKYE 619

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL +SK+QPCFLNRQ+ITLLSTLGV D +FEKKQ+E VDQLD ILT
Sbjct: 620  SENTKLDVLGYSKYQPCFLNRQMITLLSTLGVPDHIFEKKQREAVDQLDAILT 672


>ref|XP_010093320.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
            gi|587864166|gb|EXB53859.1| RNA-dependent RNA polymerase
            1 [Morus notabilis]
          Length = 1133

 Score =  798 bits (2060), Expect = 0.0
 Identities = 398/653 (60%), Positives = 496/653 (75%), Gaps = 1/653 (0%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQ+SGFPS+V+A  VKEFLE H G GTVYA+KIR  KN G   R++A+VQF T + 
Sbjct: 1    MGKTIQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGS--RSYAIVQFMTVET 58

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE +  L N  L YG S L    MERDIVPKPR T+ SL    LHFGCQ+S E+F  LW+
Sbjct: 59   AELIIRLANPRLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWR 118

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV V+FG G R++   +++  ++Y+L L Y+++WQI+L +P+   AK+L+IQ+LGAPR
Sbjct: 119  VGNVSVDFGLGLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLIQLLGAPR 178

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            +YEK +  S DI  +   NYF+DTPDDQWVR TDFT S CIG  SAL LELP    L ++
Sbjct: 179  VYEKEVRISFDILENPLFNYFKDTPDDQWVRATDFTESCCIGHSSALYLELPYGVDLPDL 238

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            RENF YY+E +  F+LESG +FS + +LVP+VGPP G+ LP+   FK+N L+QNGCL+GP
Sbjct: 239  RENFVYYKESEERFILESGSSFSRNLDLVPIVGPPSGINLPFETVFKINMLLQNGCLSGP 298

Query: 1061 TLDAAFFRLVHPQYIP-ITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPD 885
            TLD  F+RLV PQ I  +  I YALEKL++LKEC YEP  WL EQY++Y  +  P + P 
Sbjct: 299  TLDVDFYRLVDPQRIRNVDCINYALEKLFNLKECPYEPAAWLNEQYRKYLTAPRPPKPPA 358

Query: 884  ISLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAF 705
            I+LD GLVY+RR+Q+TP+KVYFCGP+INVSNRV+R Y  YID F+R+S VDE+ EK+ + 
Sbjct: 359  IALDSGLVYVRRVQVTPSKVYFCGPEINVSNRVLREYIDYIDYFLRVSFVDEELEKLFST 418

Query: 704  DLSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNG 525
            DLSPR ++ +EDR+ T IYRRI+S+L+NGI IGD+KF+FLAFSSSQLR+NS WMFA+ +G
Sbjct: 419  DLSPRTSNANEDRR-TGIYRRILSVLRNGIEIGDRKFEFLAFSSSQLRDNSLWMFAAVDG 477

Query: 524  VTAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYV 345
             +A  IR+W+GDF  IRNVAKYAARLGQSF SSTETLTV+  ETE+I D+EIE+   KYV
Sbjct: 478  HSADTIRQWIGDFRSIRNVAKYAARLGQSFGSSTETLTVDESETEVISDIEIERGAVKYV 537

Query: 344  FSDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKY 165
            FSDGIGKIS  FA+RVAKKCG+    PS+FQIRY GYKGVVAVDP S  KLSLR+SM KY
Sbjct: 538  FSDGIGKISSTFAKRVAKKCGLKDCVPSAFQIRYCGYKGVVAVDPTSSTKLSLRKSMWKY 597

Query: 164  TSTNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMIL 6
             S   KLDVL +SK Q C+LNRQ+ITLLSTLGV D VFEKKQ+E V QL+ IL
Sbjct: 598  ESELHKLDVLAYSKLQHCYLNRQLITLLSTLGVGDRVFEKKQREAVQQLNAIL 650


>gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gossypium arboreum]
            gi|728850182|gb|KHG29625.1| RNA-dependent RNA polymerase
            1 -like protein [Gossypium arboreum]
          Length = 1110

 Score =  793 bits (2049), Expect = 0.0
 Identities = 399/653 (61%), Positives = 498/653 (76%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQV GF S V+A  VK FLE + G  TVYALKIRQ K  G   RA+A+VQFT + +
Sbjct: 1    MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSG---RAYAIVQFTRSSD 57

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            A  +  L N+ L YG S LK   ME DIVPKPRV + +++   ++FGCQVS E+F+VLWK
Sbjct: 58   AGLIIRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWK 117

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV +NFG G RK+E L+S+ S  YKL+L Y++IWQI+LR P S  +K L+IQ+ GAPR
Sbjct: 118  ADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPR 177

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYE  +  S  +F D  LNYF+D PDDQWVRTTDFT S CIGQ S LCLELP +  L N 
Sbjct: 178  IYETEVRASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQLPNF 237

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            RENF YY+E++G  +LESG ++S +  LVP+V P + ++LP+ I FKVN LVQNGC+ GP
Sbjct: 238  RENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGP 297

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD  F+RLV P  +   +I++ALEKLY+L+ECCYEP +WL E+YK + +S     SP I
Sbjct: 298  ALDDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTI 357

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD+GLVY+RR+QITP++VYFCGP+INVSNRV+R +H  IDNF+RIS VDE+ EK+ + +
Sbjct: 358  SLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTN 417

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            +  R        + T IY+RI+S L+NGIVIG+K+F+FLAFSSSQLRENSAWMFAS  G+
Sbjct: 418  VQARG-------RRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGL 470

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR WMG+F +IRNVAKYAARLGQSFSSSTETL+V   E  +IPD+EI ++G KYVF
Sbjct: 471  TAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVF 530

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS +FA++VA KC + G TPS+FQIR GG+KGVVA+DP S  KLSLR+SM KY 
Sbjct: 531  SDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYE 590

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL WSK+QPCFLNRQ+ITLLSTLGV D  FEKKQ+E VDQL+ +LT
Sbjct: 591  SENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDYAFEKKQREVVDQLNALLT 643


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  793 bits (2048), Expect = 0.0
 Identities = 400/653 (61%), Positives = 498/653 (76%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQV GF S V+A  VK FLE + G  TVYALKIRQ K  G   RAFA+VQFT + +
Sbjct: 1    MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSG---RAFAIVQFTRSSD 57

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            A  +  L N+ L YG S LK   ME DIVPKPRV + +++   ++FGCQVS E+F+VLWK
Sbjct: 58   AGLIIRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWK 117

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV +NFG G RK+E L+S+ S  YKL+L Y++IWQI+LR P S  +K L+IQ+ GAPR
Sbjct: 118  ADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPR 177

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYEK +  S  +F D  LNYF+D PDDQWVRTTDFT S CIGQ S L LELP +  L N 
Sbjct: 178  IYEKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLWLELPHNLQLPNF 237

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            RENF YY+E++G  +LESG ++S +  LVP+V P + ++LP+ I FKVN LVQNGC+ GP
Sbjct: 238  RENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGP 297

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD  F+RLV P  +   +I++ALEKLY+L+ECCYEP +WL E+YK + +S     SP I
Sbjct: 298  ALDDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTI 357

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD+GLVY+RR+QITP++VYFCGP+INVSNRV+R +H  IDNF+RIS VDE+ EK+ + +
Sbjct: 358  SLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTN 417

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            +  R        + T IY+RI+S L+NGIVIG+K+F+FLAFSSSQLRENSAWMFAS  G+
Sbjct: 418  VQARG-------RRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGL 470

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR WMG+F +IRNVAKYAARLGQSFSSSTETL+V   E  +IPD+EI ++G KYVF
Sbjct: 471  TAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVF 530

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS +FA++VA KC + G TPS+FQIR GG+KGVVA+DP S  KLSLR+SM KY 
Sbjct: 531  SDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYE 590

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL WSK+QPCFLNRQ+ITLLSTLGV D  FEKKQ+E VDQL+ +LT
Sbjct: 591  SENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDRAFEKKQREVVDQLNALLT 643


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  793 bits (2048), Expect = 0.0
 Identities = 400/657 (60%), Positives = 500/657 (76%), Gaps = 4/657 (0%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQV GFP+ VTA  VK+FLES  G GTVYALK+R  K KG   R +A+VQFTT + 
Sbjct: 1    MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPK-KGVG-RLYAIVQFTTKEA 58

Query: 1781 AETVYSLINRGLK--YGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVL 1608
            A+T+ SL  R  K  YG S L    ME+D VP+PR  M +++   LHFGC++S+E+F VL
Sbjct: 59   ADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVL 118

Query: 1607 WKNRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGA 1428
            W+  NV VNFGFG RK+  L+SH   +Y+L+L Y++IW+I+L  P+    K+L+IQ+LGA
Sbjct: 119  WRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGA 178

Query: 1427 PRIYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILS 1248
            PRI++K I +   ++     N+F++ PDDQWVRTTDFT S  IGQ + LC+ELP    L 
Sbjct: 179  PRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELP 238

Query: 1247 NIRENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLA 1068
            + +ENF YY+E +  F+LE+G  +S S +LVP+VGPP G+ LPY I FK+N LVQNGC+A
Sbjct: 239  DFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVA 298

Query: 1067 GPTLDAAFFRLVHPQYIP--ITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVR 894
            GP LD+ F+RLV P   P  I+ IE+AL+KLYHLKECCYEP +WL +QY++Y  S +   
Sbjct: 299  GPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPS 358

Query: 893  SPDISLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKM 714
            SP ISLDDGLVY+ R+Q+TP++VYFCGP+INVSNRV+RH+ + IDNF+RIS +DED +K+
Sbjct: 359  SPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKI 418

Query: 713  RAFDLSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFAS 534
             + DLSPR +S   D   T IY RI+S L+NGI+IGD+KF+FLAFSSSQLRE+SAWMFAS
Sbjct: 419  HSTDLSPRGSSA-TDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFAS 477

Query: 533  CNGVTAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGK 354
              G+TAA IREWMG+F EIRNVAKYAARLGQSFSSS ETL+V   E EIIPDV+IE    
Sbjct: 478  RYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEIEIIPDVKIEIGKT 537

Query: 353  KYVFSDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSM 174
            KYVFSDGIGK+S +FAR+VA KCG+    PS+FQIRYGGYKGVVA DP S KKLSLR SM
Sbjct: 538  KYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSM 597

Query: 173  SKYTSTNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
             KY S  TKLDVL WSK+QPCFLNRQ+I+LLSTLG+ D +FEKKQ+E V QLD ILT
Sbjct: 598  RKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILT 654


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  790 bits (2041), Expect = 0.0
 Identities = 398/653 (60%), Positives = 496/653 (75%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQV GF S V+A  VK FLE + G  TVYALKIRQ K  G   RAFA+VQFT + +
Sbjct: 1    MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSG---RAFAIVQFTRSSD 57

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            A  +  L N+ L YG S LK   ME DIVPKPRV + +++   ++F C VS E+F+VLWK
Sbjct: 58   AGLIIRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWK 117

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV +NFG G RK+E L+S+ S  YKL+L Y++IWQI+LR P S  +K L+IQ+ GAPR
Sbjct: 118  ADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPR 177

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYEK +  S  +F D  LNYF+D PDDQWVRTTDFT S CIGQ S LCLELP +  L N 
Sbjct: 178  IYEKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQLPNF 237

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            RENF YY+E++G  +LESG ++S +  LVP+V P + ++LP+ I FKVN LVQNGC+ GP
Sbjct: 238  RENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGP 297

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD  F+RLV P  +   +I++ALEKLY+L+ECCYEP +WL E+YK + +S     SP I
Sbjct: 298  ALDDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTI 357

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD+GLVY+RR+QITP++VYFCGP+INVSNRV+R +H  IDNF+RIS VDE+ EK+ + +
Sbjct: 358  SLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTN 417

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            +  R        + T IY+RI+S L+NGIVIG+K+F+FLAFSSSQLRENSAWMFAS  G+
Sbjct: 418  VQARG-------RRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGL 470

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR WMG+F +IRNVAKYAARLGQSFSSSTETL+V   E  +IPD+EI ++G KYVF
Sbjct: 471  TAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVF 530

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
             DGIGKIS +FA++VA KC + G TPS+FQIR GG+KGVVA+DP S  KLSLR+SM KY 
Sbjct: 531  PDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYE 590

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL WSK+QPCFLNRQ+ITLLSTLGV D  FEKKQ+E VDQL+ +LT
Sbjct: 591  SENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDYAFEKKQREVVDQLNALLT 643


>ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [Gossypium raimondii]
            gi|763812161|gb|KJB79013.1| hypothetical protein
            B456_013G029000 [Gossypium raimondii]
          Length = 1110

 Score =  789 bits (2037), Expect = 0.0
 Identities = 395/653 (60%), Positives = 495/653 (75%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQV GF S V+A  VK FLE + G  TVYALKIRQ K  G   RA+A+VQFT +  
Sbjct: 1    MGKTIQVYGFLSNVSAGEVKTFLEGYTGRETVYALKIRQHKKGG---RAYAIVQFTRSSA 57

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE +  L N+ L YG S LK   ME DIVPKPR  + +++   ++FGCQVS E+F+VLWK
Sbjct: 58   AELIIRLANQRLYYGRSYLKAREMETDIVPKPRAFLHTMERVTVNFGCQVSVEKFYVLWK 117

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV +NFG G RK+E L+S+    YKL+L Y++IWQI+LR P S  +K L+IQ+ GAPR
Sbjct: 118  AENVTLNFGTGMRKLEFLVSYCRSKYKLELFYENIWQIELRCPDSQTSKHLLIQLFGAPR 177

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYEK +  S  +F D  LNYF+D PDDQWVRTTDFT S CIGQ S LCLELP +  L N 
Sbjct: 178  IYEKEVRASELVFDDPLLNYFKDVPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLRLPNF 237

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            RENF YY+E++   +LESG ++S +  LVP+V P + ++LP+ I FKVN LVQNGC+ GP
Sbjct: 238  RENFAYYKENESRLVLESGSSYSCNLSLVPIVCPLRVIDLPFEILFKVNLLVQNGCIPGP 297

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
             LD  F+RLV P  +   +I++ALEKLY+L+ECCYEP +WL E+YK + +S     SP I
Sbjct: 298  ALDDTFYRLVDPCRMDKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPAI 357

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD+GLVY+RR+QITP++VYFCGP+INVSNRV+R +H  IDNF+RIS VDE+ EK+ + +
Sbjct: 358  SLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSIN 417

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            +  R        + T+IY RI+S L+NG++IGDK+F+FLAFSSSQLRENSAWMFAS  G+
Sbjct: 418  VQARG-------RRTSIYERILSTLRNGVLIGDKRFEFLAFSSSQLRENSAWMFASRKGL 470

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR WMG+F +IRNVAKYAARLGQSFSSSTETL+V   E  +IPD+EI ++G KYVF
Sbjct: 471  TAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVF 530

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS  FA++VA KC + G TPS+FQIR GG+KGVVA+DP S  KLSLR+SM KY 
Sbjct: 531  SDGIGKISAKFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYE 590

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            S NTKLDVL WSK+QPCFLNRQ+ITLLSTLGV D  FEKKQ+E ++QL+ +LT
Sbjct: 591  SENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDRAFEKKQREVIEQLNALLT 643


>ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  788 bits (2036), Expect = 0.0
 Identities = 405/653 (62%), Positives = 490/653 (75%), Gaps = 1/653 (0%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            MS+TIQV GFPS V+A  +KEFLE + GEGT+ AL+I+Q ++        A VQFT+ + 
Sbjct: 1    MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGAS--MTHAKVQFTSFEL 58

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE + +L  + + YG + LK   M+ DI+PKPR  + S+D   LHFGCQ+S ERF VLWK
Sbjct: 59   AEFIITLCKKKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWK 118

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV V FG G RK    +SH S +YKL+LSY++IWQIQL+ P+    KFL+IQ+LGAP+
Sbjct: 119  AINVSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQ 178

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYEK +   +         YF++ PDDQWVR  DFT S  IGQ  ALCLELP    L N 
Sbjct: 179  IYEKDVPVLS--------YYFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQLPNF 230

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
            RENF YY+E+ G F+LESG ++SH+  LVP++GPPQG  LP+ I FK+N LVQNGCL+GP
Sbjct: 231  RENFAYYKENDGKFILESGSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGP 290

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVR-SPD 885
            TLD +FFRLV P+  PI+ IE+ALEKLYHLKECCYEPV+WL EQY+ Y +   PV  SP 
Sbjct: 291  TLDTSFFRLVDPERFPISFIEHALEKLYHLKECCYEPVRWLSEQYRTYVKK--PVAGSPA 348

Query: 884  ISLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAF 705
            ISLD GLVY+RR+QITP KVYFCGP++NVSNRV+R+Y + IDNF+R+S +DE+ EK+ + 
Sbjct: 349  ISLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHST 408

Query: 704  DLSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNG 525
             +SPR +   ++ + T +YRRI+SIL+NGIVIGDKKFDFLAFSSSQLR+NSAWMFAS  G
Sbjct: 409  VISPRMS---KEGRRTGVYRRILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPG 465

Query: 524  VTAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYV 345
            +TAA IR WMGDF +IRNVAKYAARLGQSFSSS ETL V   E E IPD+EI +    YV
Sbjct: 466  LTAAEIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYV 525

Query: 344  FSDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKY 165
            FSDGIGKIS   A RVA KCG    TPS+FQIRYGGYKGVVAVDP S +KLSLR+SM KY
Sbjct: 526  FSDGIGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKY 585

Query: 164  TSTNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMIL 6
             S NT LDVL WSK+QP FLNRQ+ITLLSTLGV D VFEKKQ+  VDQLD IL
Sbjct: 586  ESDNTNLDVLAWSKYQPSFLNRQLITLLSTLGVKDHVFEKKQRAAVDQLDTIL 638


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
            max] gi|571439308|ref|XP_006574822.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
            max] gi|571439310|ref|XP_006574823.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
            max] gi|734360586|gb|KHN15461.1| RNA-dependent RNA
            polymerase 1 [Glycine soja] gi|947122157|gb|KRH70363.1|
            hypothetical protein GLYMA_02G086100 [Glycine max]
          Length = 1125

 Score =  786 bits (2030), Expect = 0.0
 Identities = 396/658 (60%), Positives = 501/658 (76%), Gaps = 5/658 (0%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TI++ GFP+ V    VK F+E + GEGTV+A+K+R    KG  PRAFA++QFTT  +
Sbjct: 1    MGKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRH--GKGRVPRAFAIIQFTTANS 58

Query: 1781 AETVYSLIN---RGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHV 1611
            A ++ S  N   R L+YG+S LK   MERDIVP+PRV + SLD   L FGCQ+S  RF V
Sbjct: 59   ATSMMSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSV 118

Query: 1610 LWKNRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLG 1431
            LWK ++V+VNFG G RK+  L SH+++ YKL+LSY++IW+I+L +P++   ++L+IQ+LG
Sbjct: 119  LWKKQDVIVNFGSGMRKMHFLFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQLLG 178

Query: 1430 APRIYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCIL 1251
            APR++E  + TS +IF D   N+F+D PD+QW+R  DFT    IGQ SA+CLELP    L
Sbjct: 179  APRVFENDVPTSTNIFDDPLFNFFKDAPDEQWIRAIDFTPESRIGQSSAICLELPNGRQL 238

Query: 1250 SNIRENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCL 1071
             N RENF YY E +  + L++G  FS +  LVP+V PP G+++ Y+I FKVN LVQ+ CL
Sbjct: 239  PNFRENFAYYEESERQYTLQTGVPFSQNWGLVPIVAPPLGVKISYDILFKVNSLVQHACL 298

Query: 1070 AGPTLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRS 891
            AGP LD  F+RLV P+ +P   IEYALEK+Y+ KE CYEP KWL +QYK Y +S N  RS
Sbjct: 299  AGPALDGDFYRLVDPRRMPREFIEYALEKIYYSKEFCYEPTKWLTDQYKTYLESKNHPRS 358

Query: 890  PDISLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMR 711
            P ISLD GLVY+RR+QITP KVYFCGP++NVSNRV+RH+ ++IDNF+R+S VDE+ +K+ 
Sbjct: 359  PAISLDTGLVYVRRVQITPCKVYFCGPEMNVSNRVLRHFREHIDNFLRVSFVDEELDKLF 418

Query: 710  AFDLSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASC 531
            + DLS R+       K T IY RI+SILKNGIV+GDKKF+FLAFSSSQLRENS WMFA  
Sbjct: 419  STDLSSRS-----QNKKTEIYTRILSILKNGIVVGDKKFEFLAFSSSQLRENSLWMFAPT 473

Query: 530  -NGVTAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDV-EIEQNG 357
              G TAA IR+WMG+F +IRNVAKYAARLGQSF SSTETL+V   E EIIPDV ++  +G
Sbjct: 474  ETGCTAAYIRKWMGNFSQIRNVAKYAARLGQSFGSSTETLSVHRDEVEIIPDVKKLTYDG 533

Query: 356  KKYVFSDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRS 177
             +YVFSDGIGKIS++FA++VAKKCG +  TPS+FQIRYGGYKGVVAVDP S  KLSLR+S
Sbjct: 534  NEYVFSDGIGKISLEFAQKVAKKCGYD-CTPSAFQIRYGGYKGVVAVDPKSCYKLSLRKS 592

Query: 176  MSKYTSTNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            M KY S NTKLDVL  SKFQPC+LNRQ+I+LLSTLG+ D VFEKKQ+E V+QL+ ILT
Sbjct: 593  MRKYDSDNTKLDVLARSKFQPCYLNRQLISLLSTLGIKDDVFEKKQRETVNQLNTILT 650


>ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
            gi|731369199|ref|XP_010650995.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1109

 Score =  777 bits (2007), Expect = 0.0
 Identities = 405/652 (62%), Positives = 491/652 (75%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQV G PS V+A  +KEFLE + GEGT+ AL+I+Q K+        A VQFT+ + 
Sbjct: 1    MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVS--MTHAKVQFTSLRL 58

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE + SL  + L YG + LK   M+ DI+PKPR  + S+D   LHFG Q+S+ERF VLWK
Sbjct: 59   AELIISLAKQ-LWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWK 117

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV V FGFG RK    +SH S +YKL+LS ++IWQIQLR+P+  + KFL+IQ+L AP+
Sbjct: 118  AINVSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQ 177

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            IYEK +S          L+YF++TPDDQWVR  DFT S  IGQ SALCLELP    L N 
Sbjct: 178  IYEKDVSA---------LSYFKETPDDQWVREIDFTPSCSIGQSSALCLELPHGSQLPNF 228

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
             ENF  Y+E+   F+LESG +FS +  LVP+VGPPQG  LP+ I FK+N LVQNGCL+GP
Sbjct: 229  CENFARYKENDRKFILESGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGP 288

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
            TLD  FFR V PQ I I+ IE+ALEKLY+L+ECCYEPV+WL EQY+ Y  S     SP I
Sbjct: 289  TLDTNFFRWVDPQRINISFIEHALEKLYYLEECCYEPVRWLHEQYRTYI-SKQVAGSPAI 347

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            SLD GLVY+RR+QITP KVYFCGP++NVSNRV+R+Y + IDNF+R+S +DE+ EK+ +  
Sbjct: 348  SLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTV 407

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            +SPR ++   + + T +YRRI+SIL+NGIVIGDKKFDFLA SSSQLR+NSAWMFAS  G+
Sbjct: 408  ISPRMSN---EGRRTGVYRRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGL 464

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYVF 342
            TAA+IR  MGDF +IRNVAKYAARLGQSFSSS ETL V  HE EIIPD+E  ++G  YVF
Sbjct: 465  TAADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVF 524

Query: 341  SDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKYT 162
            SDGIGKIS + A RVA KCG    TPS+FQIRYGGYKGVVAVDP S +KLSLR+SM KY 
Sbjct: 525  SDGIGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYE 584

Query: 161  STNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMIL 6
            S NT LDVL+WSK++PCFLNRQ+ITLLSTLGV D VFEKKQ+E VDQLD IL
Sbjct: 585  SENTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREAVDQLDTIL 636


>ref|XP_010670368.1| PREDICTED: RNA-dependent RNA polymerase 1 [Beta vulgaris subsp.
            vulgaris] gi|870866168|gb|KMT17177.1| hypothetical
            protein BVRB_2g040860 [Beta vulgaris subsp. vulgaris]
          Length = 1132

 Score =  776 bits (2003), Expect = 0.0
 Identities = 398/653 (60%), Positives = 487/653 (74%), Gaps = 2/653 (0%)
 Frame = -1

Query: 1958 SRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKNA 1779
            S+TIQ+SGFPS V+A  VK +LE   GEGT+YALKIRQ K+ G   R +AVVQFT+ + A
Sbjct: 4    SKTIQLSGFPSTVSAEAVKTYLEDKTGEGTIYALKIRQFKSGGT--RCYAVVQFTSVRMA 61

Query: 1778 ETVYSLINRGLK--YGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLW 1605
            E + SL     K  Y S+ LK   M++DIVPKPR     +D   LH GCQ S+++F   W
Sbjct: 62   ELILSLAEPPKKIWYRSNFLKAREMDKDIVPKPRTYQHRMDNITLHVGCQTSNDKFLAFW 121

Query: 1604 KNRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAP 1425
              RNV ++FG G R+    +S+   +YKL LSY+SIWQI+LR+P++ H K+L+IQ+ GAP
Sbjct: 122  SGRNVSLSFGSGLRRFYFYLSYDEKEYKLQLSYESIWQIELRRPRANHVKYLLIQLFGAP 181

Query: 1424 RIYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSN 1245
            RI+EK+   S  +F   E NYF++  DDQW RTTDFT S C+GQ S LCLELP +C L +
Sbjct: 182  RIFEKVERVSGLLF---ENNYFKEEQDDQWFRTTDFTPSSCVGQSSVLCLELPYNCELPD 238

Query: 1244 IRENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAG 1065
             R  F Y++ED G F L SG TFS + ELVP+V PP+G+ELP+ I FKVN LVQ GCL G
Sbjct: 239  FRATFPYFKEDDGQFTLVSGNTFSCNMELVPIVAPPRGVELPFYILFKVNYLVQFGCLPG 298

Query: 1064 PTLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPD 885
            P LD +F++++ P+ I    +EYALEKLY+LKECCY+P  WLK+QY +Y  S      P 
Sbjct: 299  PNLDHSFYQMIDPRKIDKACVEYALEKLYYLKECCYDPFGWLKQQYTKYLTSKRIPEKPT 358

Query: 884  ISLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAF 705
            ISLD GLVY+RR+Q+TP +VYFCGP++NVSNRV+R+Y   +DNF+RIS VDED EK+ + 
Sbjct: 359  ISLDVGLVYVRRVQVTPCRVYFCGPEVNVSNRVLRNYPYDVDNFLRISFVDEDLEKLYST 418

Query: 704  DLSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNG 525
            DLSPR +S+      T I RRI S LKNGI IGDKKF+FLAFSSSQLRENSAWMFAS  G
Sbjct: 419  DLSPRFSSEPGAGMRTNIDRRIRSTLKNGIHIGDKKFEFLAFSSSQLRENSAWMFASRPG 478

Query: 524  VTAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQNGKKYV 345
            ++AA+IR WMGDF EIRNVAKYAARLGQSFSSSTETLTV   E E+IPDV++      ++
Sbjct: 479  LSAADIRNWMGDFREIRNVAKYAARLGQSFSSSTETLTVAREEIEMIPDVKVTVGRNTHI 538

Query: 344  FSDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMSKY 165
            FSDGIGKIS DFA +VAKKCG N  TPS+FQIRYGG+KGVVAVDP S KKLSLR SM KY
Sbjct: 539  FSDGIGKISADFACKVAKKCGYNS-TPSAFQIRYGGFKGVVAVDPMSCKKLSLRNSMCKY 597

Query: 164  TSTNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMIL 6
             S N KLDVL +SK+QPC+LNRQ+ITLLSTLGV D VFEKKQKE ++QLD IL
Sbjct: 598  QSDNAKLDVLAYSKYQPCYLNRQLITLLSTLGVQDRVFEKKQKEALNQLDAIL 650


>emb|CDP05596.1| unnamed protein product [Coffea canephora]
          Length = 1112

 Score =  772 bits (1994), Expect = 0.0
 Identities = 398/656 (60%), Positives = 493/656 (75%), Gaps = 3/656 (0%)
 Frame = -1

Query: 1961 MSRTIQVSGFPSYVTAPPVKEFLESHAGEGTVYALKIRQCKNKGPNPRAFAVVQFTTNKN 1782
            M +TIQV GFPS V A  V +FLE   G+GTVYAL+I+Q  +KG N RA+A VQFT +++
Sbjct: 1    MGKTIQVFGFPSVVPAETVTKFLECFTGQGTVYALEIKQ--SKGGN-RAYAKVQFTNDRS 57

Query: 1781 AETVYSLINRGLKYGSSDLKVHNMERDIVPKPRVTMLSLDVTALHFGCQVSSERFHVLWK 1602
            AE + +L  + L YGSS L+   M+ D+VP+ R    +++   LHFGCQVS  RF VL  
Sbjct: 58   AEYIMTLAKKRLNYGSSYLRAWEMDVDLVPRARSFEHNMEQIVLHFGCQVSKNRFSVLRN 117

Query: 1601 NRNVVVNFGFGSRKVELLISHSSIDYKLDLSYDSIWQIQLRQPQSLHAKFLVIQVLGAPR 1422
              NV V FG G RK+  ++   S DYKL+LSY++IWQI L + +SL  KFL+IQ+ GAPR
Sbjct: 118  VPNVSVRFGIGMRKMYFILRFRSCDYKLELSYENIWQIVLHR-RSLAPKFLLIQLFGAPR 176

Query: 1421 IYEKLISTSADIFGDVELNYFRDTPDDQWVRTTDFTTSFCIGQMSALCLELPRSCILSNI 1242
            +++KL  ++         +YF++TPDDQWVRTTDFT+S CIGQ S +CLELPR   L N+
Sbjct: 177  VFKKLEEST--------FSYFKETPDDQWVRTTDFTSS-CIGQSSGICLELPRGIQLPNL 227

Query: 1241 RENFHYYREDKGPFLLESGCTFSHSSELVPMVGPPQGLELPYNIFFKVNCLVQNGCLAGP 1062
             + F +++E    F LE+G  +S++  L P++ PPQGL LPY I FKV CLVQ GCL GP
Sbjct: 228  GDYFAWFKESDSQFFLETGSPYSYNLVLAPILQPPQGLYLPYGILFKVCCLVQTGCLPGP 287

Query: 1061 TLDAAFFRLVHPQYIPITHIEYALEKLYHLKECCYEPVKWLKEQYKRYRQSNNPVRSPDI 882
            +LDA FFRLV PQ I I +IE+ALE LY LKECCYEPV+WLKEQY +Y +     +SP +
Sbjct: 288  SLDANFFRLVDPQRIKIRYIEHALENLYMLKECCYEPVQWLKEQYDKYDKLRQLPKSPTL 347

Query: 881  SLDDGLVYIRRIQITPTKVYFCGPDINVSNRVIRHYHKYIDNFIRISIVDEDWEKMRAFD 702
            +LDDGLVY+RR+Q+TP KVYFCGP++NVSNRV+R++ + +DNF+R+S +DE+W KM + D
Sbjct: 348  TLDDGLVYVRRVQVTPCKVYFCGPEVNVSNRVLRNFSEDLDNFLRVSFIDEEWNKMFSTD 407

Query: 701  LSPRATSKHEDRKHTAIYRRIISILKNGIVIGDKKFDFLAFSSSQLRENSAWMFASCNGV 522
            LSPR  +    R  T IY RI+S LKNG+VIGDKKF+FLAFSSSQLR+NS WMFAS  G+
Sbjct: 408  LSPRIAANENGR--TEIYERILSTLKNGMVIGDKKFEFLAFSSSQLRDNSVWMFASRPGL 465

Query: 521  TAANIREWMGDFHEIRNVAKYAARLGQSFSSSTETLTVENHETEIIPDVEIEQ---NGKK 351
            TAA+IR WMGDF  IRNVAKYAARLGQSFSSSTETL V  HE E+I D+E+        K
Sbjct: 466  TAADIRTWMGDFSRIRNVAKYAARLGQSFSSSTETLNVGRHEIEMISDIEVRGGYFGTSK 525

Query: 350  YVFSDGIGKISVDFARRVAKKCGINGFTPSSFQIRYGGYKGVVAVDPNSVKKLSLRRSMS 171
            YVFSDGIGK+S  FAR+VA KCG++ FTPS+FQIRYGG+KGVVAVDP S KKLSLR+SM 
Sbjct: 526  YVFSDGIGKMSAQFARQVATKCGLS-FTPSAFQIRYGGFKGVVAVDPTSSKKLSLRQSMM 584

Query: 170  KYTSTNTKLDVLTWSKFQPCFLNRQIITLLSTLGVNDSVFEKKQKEEVDQLDMILT 3
            KY S NTKLDVL WSK+QPCFLNRQ+ITLLSTLGV D VFEKKQ+E V QLD ILT
Sbjct: 585  KYESDNTKLDVLAWSKYQPCFLNRQLITLLSTLGVKDVVFEKKQREAVAQLDTILT 640