BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00016434
         (615 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36057.3| unnamed protein product [Vitis vinifera]              213   7e-53
ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair ...   202   2e-49
ref|XP_008462417.1| PREDICTED: MMS19 nucleotide excision repair ...   201   3e-49
ref|XP_011659674.1| PREDICTED: MMS19 nucleotide excision repair ...   200   4e-49
ref|XP_011659673.1| PREDICTED: MMS19 nucleotide excision repair ...   200   4e-49
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   200   4e-49
ref|XP_010665894.1| PREDICTED: MMS19 nucleotide excision repair ...   200   6e-49
ref|XP_008462420.1| PREDICTED: MMS19 nucleotide excision repair ...   198   2e-48
ref|XP_008462419.1| PREDICTED: MMS19 nucleotide excision repair ...   198   2e-48
ref|XP_008462418.1| PREDICTED: MMS19 nucleotide excision repair ...   198   2e-48
ref|XP_008462416.1| PREDICTED: MMS19 nucleotide excision repair ...   198   2e-48
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   198   2e-48
ref|XP_007024314.1| MMS19 nucleotide excision repair protein, pu...   197   3e-48
ref|XP_007024313.1| MMS19 nucleotide excision repair protein, pu...   197   3e-48
ref|XP_007024312.1| MMS19 nucleotide excision repair protein, pu...   197   3e-48
ref|XP_007024310.1| MMS19 nucleotide excision repair protein, pu...   197   3e-48
gb|KHG04543.1| MMS19 nucleotide excision repair [Gossypium arbor...   197   5e-48
ref|XP_012451237.1| PREDICTED: MMS19 nucleotide excision repair ...   196   1e-47
gb|KJB68183.1| hypothetical protein B456_010G230600 [Gossypium r...   196   1e-47
ref|XP_012451235.1| PREDICTED: MMS19 nucleotide excision repair ...   196   1e-47

>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  213 bits (542), Expect = 7e-53
 Identities = 103/167 (61%), Positives = 132/167 (79%), Gaps = 1/167 (0%)
 Frame = -2

Query: 500 SSFFATTVSDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYG 321
           S+    T +DAR++A++Y++N+QVQSLG+HDRKLCFEIL CLL+H+P+ V +L DD+ YG
Sbjct: 117 SNMGRVTDNDARAVAQAYLENVQVQSLGQHDRKLCFEILECLLDHYPESVASLGDDLVYG 176

Query: 320 LIEAIEGEKDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTI-D 144
           +  AI+GEKDP CL+LTFHIV  L RLFPDP GP+A  A +LFD+LG YFP+HFTH   +
Sbjct: 177 ICGAIDGEKDPRCLMLTFHIVEILARLFPDPSGPLASFAGDLFDILGCYFPIHFTHPQGE 236

Query: 143 DFNVKREDLSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           D +VKR+DLSRALMLAF+ST LFEPFA+P         LP+AK+DSL
Sbjct: 237 DVDVKRDDLSRALMLAFSSTTLFEPFAIPLLLEKLSSSLPLAKVDSL 283


>ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Nelumbo nucifera] gi|719979495|ref|XP_010249498.1|
           PREDICTED: MMS19 nucleotide excision repair protein
           homolog [Nelumbo nucifera]
          Length = 1160

 Score =  202 bits (513), Expect = 2e-49
 Identities = 97/166 (58%), Positives = 126/166 (75%), Gaps = 1/166 (0%)
 Frame = -2

Query: 500 SSFFATTVSDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYG 321
           SS    + SDAR + +SY+QN+QVQSL +HDR LCFE+L CLL+ + D V  L DD+ YG
Sbjct: 117 SSVGMVSGSDARLVGQSYLQNLQVQSLAQHDRMLCFELLECLLDRYSDAVAALGDDLVYG 176

Query: 320 LIEAIEGEKDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTI-D 144
           + EAI+GEKDP CL+LTFH+V  L  LFP+P GP+A  A ++F++LG YFP+HFTH   D
Sbjct: 177 ICEAIDGEKDPRCLMLTFHLVEVLAWLFPEPSGPLASFAGDIFEILGCYFPIHFTHQQGD 236

Query: 143 DFNVKREDLSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDS 6
           DF++KR+DLSRALMLAF+S+PLFEPFA+P         LP+AK+DS
Sbjct: 237 DFDIKRDDLSRALMLAFSSSPLFEPFAIPLLLEKLSSSLPLAKVDS 282


>ref|XP_008462417.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X2 [Cucumis melo]
          Length = 1144

 Score =  201 bits (510), Expect = 3e-49
 Identities = 98/159 (61%), Positives = 125/159 (78%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+S+A+SY QN+QVQSLG+HDRKL FE+L+CLL H+PD VV+L DD+ YG+ EAI+GE
Sbjct: 125 NDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLVYGICEAIDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH-TIDDFNVKRED 120
           KDP CLLLTF IV  + +LFPDP G +A  + +LF+ LG YFP+HFTH   +D +V+R D
Sbjct: 185 KDPHCLLLTFRIVELVAKLFPDPSGTLASSSSDLFEFLGCYFPIHFTHGKEEDIDVRRND 244

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           LS+ALM AF+STPLFEPFA+P         LP+AKIDSL
Sbjct: 245 LSQALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSL 283


>ref|XP_011659674.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X3 [Cucumis sativus]
          Length = 1035

 Score =  200 bits (509), Expect = 4e-49
 Identities = 98/159 (61%), Positives = 124/159 (77%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+S+A+SY QN+QVQSLG+HDRKL FE+L+CLL H+PD VV+L DD+ YG+ EAI+GE
Sbjct: 13  NDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLVYGICEAIDGE 72

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH-TIDDFNVKRED 120
           KDP CLLLTF IV  + +LFPDP G +A  + +LF+ LG YFP+HFTH   +D +V+R D
Sbjct: 73  KDPHCLLLTFRIVELVAKLFPDPTGALASSSSDLFEFLGCYFPIHFTHGKEEDIDVRRND 132

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           LS ALM AF+STPLFEPFA+P         LP+AKIDSL
Sbjct: 133 LSHALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSL 171


>ref|XP_011659673.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X2 [Cucumis sativus]
          Length = 1144

 Score =  200 bits (509), Expect = 4e-49
 Identities = 98/159 (61%), Positives = 124/159 (77%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+S+A+SY QN+QVQSLG+HDRKL FE+L+CLL H+PD VV+L DD+ YG+ EAI+GE
Sbjct: 125 NDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLVYGICEAIDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH-TIDDFNVKRED 120
           KDP CLLLTF IV  + +LFPDP G +A  + +LF+ LG YFP+HFTH   +D +V+R D
Sbjct: 185 KDPHCLLLTFRIVELVAKLFPDPTGALASSSSDLFEFLGCYFPIHFTHGKEEDIDVRRND 244

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           LS ALM AF+STPLFEPFA+P         LP+AKIDSL
Sbjct: 245 LSHALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSL 283


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X1 [Cucumis sativus] gi|700190347|gb|KGN45580.1|
           hypothetical protein Csa_7G452350 [Cucumis sativus]
          Length = 1147

 Score =  200 bits (509), Expect = 4e-49
 Identities = 98/159 (61%), Positives = 124/159 (77%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+S+A+SY QN+QVQSLG+HDRKL FE+L+CLL H+PD VV+L DD+ YG+ EAI+GE
Sbjct: 125 NDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLVYGICEAIDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH-TIDDFNVKRED 120
           KDP CLLLTF IV  + +LFPDP G +A  + +LF+ LG YFP+HFTH   +D +V+R D
Sbjct: 185 KDPHCLLLTFRIVELVAKLFPDPTGALASSSSDLFEFLGCYFPIHFTHGKEEDIDVRRND 244

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           LS ALM AF+STPLFEPFA+P         LP+AKIDSL
Sbjct: 245 LSHALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSL 283


>ref|XP_010665894.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X1 [Beta vulgaris subsp. vulgaris]
           gi|870843270|gb|KMS96482.1| hypothetical protein
           BVRB_9g224750 [Beta vulgaris subsp. vulgaris]
          Length = 1139

 Score =  200 bits (508), Expect = 6e-49
 Identities = 92/158 (58%), Positives = 123/158 (77%), Gaps = 1/158 (0%)
 Frame = -2

Query: 473 DARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGEK 294
           DA+ LA+S+++N+QVQSLG+HDRKLCFE+L CLL+ HP+ +  L D I YG+ EAIEGEK
Sbjct: 126 DAKMLAQSFLENLQVQSLGQHDRKLCFELLECLLDRHPESLAALGDHIVYGVCEAIEGEK 185

Query: 293 DPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH-TIDDFNVKREDL 117
           DP+CL+  FHIV  L   FPDP GP+A  AE+LFD++GRYFP+H+TH   +D +V R+DL
Sbjct: 186 DPQCLMHVFHIVEGLAHNFPDPSGPVASFAEDLFDIIGRYFPIHYTHPKSEDVDVSRDDL 245

Query: 116 SRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           SRALM+AF+++P FEPF++P         LP+AK+DSL
Sbjct: 246 SRALMMAFSASPFFEPFSIPLLLEKLSSNLPLAKLDSL 283


>ref|XP_008462420.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X5 [Cucumis melo]
          Length = 1039

 Score =  198 bits (503), Expect = 2e-48
 Identities = 98/166 (59%), Positives = 125/166 (75%), Gaps = 8/166 (4%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+S+A+SY QN+QVQSLG+HDRKL FE+L+CLL H+PD VV+L DD+ YG+ EAI+GE
Sbjct: 13  NDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLVYGICEAIDGE 72

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH--------TIDD 141
           KDP CLLLTF IV  + +LFPDP G +A  + +LF+ LG YFP+HFTH          +D
Sbjct: 73  KDPHCLLLTFRIVELVAKLFPDPSGTLASSSSDLFEFLGCYFPIHFTHGKEEDIDGKEED 132

Query: 140 FNVKREDLSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
            +V+R DLS+ALM AF+STPLFEPFA+P         LP+AKIDSL
Sbjct: 133 IDVRRNDLSQALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSL 178


>ref|XP_008462419.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X4 [Cucumis melo]
          Length = 1088

 Score =  198 bits (503), Expect = 2e-48
 Identities = 98/166 (59%), Positives = 125/166 (75%), Gaps = 8/166 (4%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+S+A+SY QN+QVQSLG+HDRKL FE+L+CLL H+PD VV+L DD+ YG+ EAI+GE
Sbjct: 125 NDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLVYGICEAIDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH--------TIDD 141
           KDP CLLLTF IV  + +LFPDP G +A  + +LF+ LG YFP+HFTH          +D
Sbjct: 185 KDPHCLLLTFRIVELVAKLFPDPSGTLASSSSDLFEFLGCYFPIHFTHGKEEDIDGKEED 244

Query: 140 FNVKREDLSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
            +V+R DLS+ALM AF+STPLFEPFA+P         LP+AKIDSL
Sbjct: 245 IDVRRNDLSQALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSL 290


>ref|XP_008462418.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X3 [Cucumis melo]
          Length = 1103

 Score =  198 bits (503), Expect = 2e-48
 Identities = 98/166 (59%), Positives = 125/166 (75%), Gaps = 8/166 (4%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+S+A+SY QN+QVQSLG+HDRKL FE+L+CLL H+PD VV+L DD+ YG+ EAI+GE
Sbjct: 77  NDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLVYGICEAIDGE 136

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH--------TIDD 141
           KDP CLLLTF IV  + +LFPDP G +A  + +LF+ LG YFP+HFTH          +D
Sbjct: 137 KDPHCLLLTFRIVELVAKLFPDPSGTLASSSSDLFEFLGCYFPIHFTHGKEEDIDGKEED 196

Query: 140 FNVKREDLSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
            +V+R DLS+ALM AF+STPLFEPFA+P         LP+AKIDSL
Sbjct: 197 IDVRRNDLSQALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSL 242


>ref|XP_008462416.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X1 [Cucumis melo]
          Length = 1151

 Score =  198 bits (503), Expect = 2e-48
 Identities = 98/166 (59%), Positives = 125/166 (75%), Gaps = 8/166 (4%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+S+A+SY QN+QVQSLG+HDRKL FE+L+CLL H+PD VV+L DD+ YG+ EAI+GE
Sbjct: 125 NDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLVYGICEAIDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH--------TIDD 141
           KDP CLLLTF IV  + +LFPDP G +A  + +LF+ LG YFP+HFTH          +D
Sbjct: 185 KDPHCLLLTFRIVELVAKLFPDPSGTLASSSSDLFEFLGCYFPIHFTHGKEEDIDGKEED 244

Query: 140 FNVKREDLSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
            +V+R DLS+ALM AF+STPLFEPFA+P         LP+AKIDSL
Sbjct: 245 IDVRRNDLSQALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSL 290


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
           communis] gi|223544868|gb|EEF46383.1| DNA
           repair/transcription protein met18/mms19, putative
           [Ricinus communis]
          Length = 1174

 Score =  198 bits (503), Expect = 2e-48
 Identities = 95/158 (60%), Positives = 122/158 (77%), Gaps = 1/158 (0%)
 Frame = -2

Query: 473 DARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGEK 294
           DA+ +A SY+QN+QVQSL ++DRKLCFE+L CLL + P  V +L +D+ YG+ EAI+GEK
Sbjct: 125 DAKVVAESYLQNLQVQSLAQYDRKLCFELLECLLENCPAAVASLGEDLIYGICEAIDGEK 184

Query: 293 DPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTH-TIDDFNVKREDL 117
           DP+CL+LTFHIV  L +LFPDP GP +  A ++F +LG YFP+HFTH   +D +VKR+DL
Sbjct: 185 DPQCLMLTFHIVEVLGKLFPDPSGPFSSFAGDIFSILGCYFPIHFTHPKAEDVDVKRDDL 244

Query: 116 SRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           SRALMLAF+STPLFEPFA+P         LP AK+DSL
Sbjct: 245 SRALMLAFSSTPLFEPFAMPLLLEKLSSSLPTAKVDSL 282


>ref|XP_007024314.1| MMS19 nucleotide excision repair protein, putative isoform 5
           [Theobroma cacao] gi|508779680|gb|EOY26936.1| MMS19
           nucleotide excision repair protein, putative isoform 5
           [Theobroma cacao]
          Length = 1157

 Score =  197 bits (502), Expect = 3e-48
 Identities = 93/159 (58%), Positives = 121/159 (76%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+++A SY+QN+QVQSLGK+DRKLCFE+L CLL  +P  + +L D++ YG+ EA++GE
Sbjct: 125 TDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLIYGICEAVDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTI-DDFNVKRED 120
           KDP CL+L FHI+  L +LFPDP GP    A +LF+ L  YFPVHFTH   +D N+KR+D
Sbjct: 185 KDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTHPKGEDVNIKRDD 244

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           L+RALMLAF+STPLFEPFA+P         LP AK+DSL
Sbjct: 245 LARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSL 283


>ref|XP_007024313.1| MMS19 nucleotide excision repair protein, putative isoform 4
           [Theobroma cacao] gi|508779679|gb|EOY26935.1| MMS19
           nucleotide excision repair protein, putative isoform 4
           [Theobroma cacao]
          Length = 1136

 Score =  197 bits (502), Expect = 3e-48
 Identities = 93/159 (58%), Positives = 121/159 (76%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+++A SY+QN+QVQSLGK+DRKLCFE+L CLL  +P  + +L D++ YG+ EA++GE
Sbjct: 125 TDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLIYGICEAVDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTI-DDFNVKRED 120
           KDP CL+L FHI+  L +LFPDP GP    A +LF+ L  YFPVHFTH   +D N+KR+D
Sbjct: 185 KDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTHPKGEDVNIKRDD 244

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           L+RALMLAF+STPLFEPFA+P         LP AK+DSL
Sbjct: 245 LARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSL 283


>ref|XP_007024312.1| MMS19 nucleotide excision repair protein, putative isoform 3
           [Theobroma cacao] gi|508779678|gb|EOY26934.1| MMS19
           nucleotide excision repair protein, putative isoform 3
           [Theobroma cacao]
          Length = 1062

 Score =  197 bits (502), Expect = 3e-48
 Identities = 93/159 (58%), Positives = 121/159 (76%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+++A SY+QN+QVQSLGK+DRKLCFE+L CLL  +P  + +L D++ YG+ EA++GE
Sbjct: 125 TDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLIYGICEAVDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTI-DDFNVKRED 120
           KDP CL+L FHI+  L +LFPDP GP    A +LF+ L  YFPVHFTH   +D N+KR+D
Sbjct: 185 KDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTHPKGEDVNIKRDD 244

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           L+RALMLAF+STPLFEPFA+P         LP AK+DSL
Sbjct: 245 LARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSL 283


>ref|XP_007024310.1| MMS19 nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao] gi|590619491|ref|XP_007024311.1| MMS19
           nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao] gi|508779676|gb|EOY26932.1| MMS19
           nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
           nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao]
          Length = 1149

 Score =  197 bits (502), Expect = 3e-48
 Identities = 93/159 (58%), Positives = 121/159 (76%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           +DA+++A SY+QN+QVQSLGK+DRKLCFE+L CLL  +P  + +L D++ YG+ EA++GE
Sbjct: 125 TDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLIYGICEAVDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTI-DDFNVKRED 120
           KDP CL+L FHI+  L +LFPDP GP    A +LF+ L  YFPVHFTH   +D N+KR+D
Sbjct: 185 KDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTHPKGEDVNIKRDD 244

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           L+RALMLAF+STPLFEPFA+P         LP AK+DSL
Sbjct: 245 LARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSL 283


>gb|KHG04543.1| MMS19 nucleotide excision repair [Gossypium arboreum]
          Length = 1134

 Score =  197 bits (500), Expect = 5e-48
 Identities = 92/159 (57%), Positives = 123/159 (77%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           SDA+++A SY+QN+QVQSLG+++RKL FE++ CLL  +P+ V +L D + YG+ E+++GE
Sbjct: 125 SDAKAVAESYLQNLQVQSLGQYERKLSFELMECLLERYPNAVASLGDTLIYGICESVDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTID-DFNVKRED 120
           KDP CL+LTFHI+  L RLFPDP   +AG A ELF++LG YFP+HFTH  D D  +KR+D
Sbjct: 185 KDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTHQKDEDMTIKRDD 244

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           L+RALMLAF+STPLFEP+A+P         LP AK+DSL
Sbjct: 245 LARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSL 283


>ref|XP_012451237.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X3 [Gossypium raimondii]
          Length = 1040

 Score =  196 bits (497), Expect = 1e-47
 Identities = 92/159 (57%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           SDA+++A SY+QN+QVQSLG+ +RKL FE++ CLL  +P+ V +L D + YG+ E+++GE
Sbjct: 13  SDAKAVAESYLQNLQVQSLGQFERKLSFELMECLLERYPNAVASLGDTLIYGICESVDGE 72

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTID-DFNVKRED 120
           KDP CL+LTFHI+  L RLFPDP   +AG A ELF++LG YFP+HFTH  D D  +KR+D
Sbjct: 73  KDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTHQKDEDMTIKRDD 132

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           L+RALMLAF+STPLFEP+A+P         LP AK+DSL
Sbjct: 133 LARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSL 171


>gb|KJB68183.1| hypothetical protein B456_010G230600 [Gossypium raimondii]
          Length = 1063

 Score =  196 bits (497), Expect = 1e-47
 Identities = 92/159 (57%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           SDA+++A SY+QN+QVQSLG+ +RKL FE++ CLL  +P+ V +L D + YG+ E+++GE
Sbjct: 36  SDAKAVAESYLQNLQVQSLGQFERKLSFELMECLLERYPNAVASLGDTLIYGICESVDGE 95

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTID-DFNVKRED 120
           KDP CL+LTFHI+  L RLFPDP   +AG A ELF++LG YFP+HFTH  D D  +KR+D
Sbjct: 96  KDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTHQKDEDMTIKRDD 155

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           L+RALMLAF+STPLFEP+A+P         LP AK+DSL
Sbjct: 156 LARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSL 194


>ref|XP_012451235.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X1 [Gossypium raimondii] gi|763801227|gb|KJB68182.1|
           hypothetical protein B456_010G230600 [Gossypium
           raimondii]
          Length = 1152

 Score =  196 bits (497), Expect = 1e-47
 Identities = 92/159 (57%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 SDARSLARSYVQNIQVQSLGKHDRKLCFEILSCLLNHHPDVVVTLEDDIFYGLIEAIEGE 297
           SDA+++A SY+QN+QVQSLG+ +RKL FE++ CLL  +P+ V +L D + YG+ E+++GE
Sbjct: 125 SDAKAVAESYLQNLQVQSLGQFERKLSFELMECLLERYPNAVASLGDTLIYGICESVDGE 184

Query: 296 KDPECLLLTFHIVADLFRLFPDPFGPIAGLAEELFDVLGRYFPVHFTHTID-DFNVKRED 120
           KDP CL+LTFHI+  L RLFPDP   +AG A ELF++LG YFP+HFTH  D D  +KR+D
Sbjct: 185 KDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTHQKDEDMTIKRDD 244

Query: 119 LSRALMLAFASTPLFEPFAVPXXXXXXXXXLPVAKIDSL 3
           L+RALMLAF+STPLFEP+A+P         LP AK+DSL
Sbjct: 245 LARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSL 283