BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00010483
         (945 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis ...   469   e-129
ref|YP_009114925.1| hypothetical chloroplast RF1 [Thalictrum cor...   441   e-121
ref|YP_009169409.1| hypothetical chloroplast RF1 (chloroplast) [...   434   e-119
gb|AIZ57585.1| hypothetical chloroplast RF1 (chloroplast) [Clema...   433   e-118
gb|AKM98247.1| photosystem I assembly protein Ycf1 (chloroplast)...   424   e-116
gb|AKM98423.1| photosystem I assembly protein Ycf1 (chloroplast)...   423   e-115
gb|AKM98159.1| photosystem I assembly protein Ycf1 (chloroplast)...   423   e-115
gb|AKM98071.1| photosystem I assembly protein Ycf1 (chloroplast)...   423   e-115
ref|YP_740709.1| hypothetical chloroplast RF1 [Nandina domestica...   393   e-106
ref|YP_009163076.1| hypothetical chloroplast RF1 (chloroplast) [...   386   e-104
gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis...   382   e-103
ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphy...   379   e-102
ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli...   379   e-102
ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [...   378   e-102
ref|YP_001004231.2| hypothetical chloroplast RF1 [Ranunculus mac...   377   e-102
ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [...   376   e-101
ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ...   375   e-101
ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chlorop...   375   e-101
gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast)...   375   e-101
ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|34...   375   e-101

>ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis saniculifolia]
            gi|226933940|gb|ACO92073.1| hypothetical chloroplast RF1
            (chloroplast) [Megaleranthis saniculifolia]
          Length = 1774

 Score =  469 bits (1207), Expect = e-129
 Identities = 239/315 (75%), Positives = 264/315 (83%), Gaps = 1/315 (0%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDD 763
            +IRIRSMDWTN+SLTEKK+KDLAD+TSTIRNKIEK++KDKKNIF    I IS NETS  D
Sbjct: 1017 SIRIRSMDWTNYSLTEKKMKDLADRTSTIRNKIEKITKDKKNIFKIPHINISTNETSFYD 1076

Query: 762  KRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLK 583
            KRLES K  WQILKRR+AR IRKCHYF+  FIERIYIDIF   LRII NIP I ++ LLK
Sbjct: 1077 KRLESTKNFWQILKRRNARLIRKCHYFLKFFIERIYIDIF---LRII-NIPRITIQNLLK 1132

Query: 582  SKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAYV 406
            SKK+ITDKYS NDET+KKRIDE  KN   F STI+K  S I NKNSQIFCDL+SLSQAYV
Sbjct: 1133 SKKKITDKYSYNDETDKKRIDETKKNTKNFISTIKKSISNISNKNSQIFCDLSSLSQAYV 1192

Query: 405  FYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNEWK 226
            FYKLSQTQVINKYHLKSVFQYHGT PF+KDRIKYF G QGIFH +SR+KKL +F MNEWK
Sbjct: 1193 FYKLSQTQVINKYHLKSVFQYHGTTPFIKDRIKYFFGTQGIFHSKSRYKKLRNFEMNEWK 1252

Query: 225  SWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQNN 46
            SWL+GNDHYQYDLSQ  WSRL+ +KWRN INQSFMVQ  N  NFDSY+KDQLI+YEKQ N
Sbjct: 1253 SWLIGNDHYQYDLSQNRWSRLVSKKWRNRINQSFMVQNKNLENFDSYEKDQLINYEKQKN 1312

Query: 45   YAVNSLWSQKKEINK 1
            Y VNSL SQK ++ K
Sbjct: 1313 YIVNSLTSQKDKLKK 1327


>ref|YP_009114925.1| hypothetical chloroplast RF1 [Thalictrum coreanum]
            gi|721136362|gb|AIX03573.1| hypothetical chloroplast RF1
            (plastid) [Thalictrum coreanum]
          Length = 1850

 Score =  441 bits (1134), Expect = e-121
 Identities = 228/316 (72%), Positives = 259/316 (81%), Gaps = 7/316 (2%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDD 763
            +IRIR  DWTN+SLTEKK++DLAD+TSTIRN+IEK++KDKKNI +T DI ISPNETSCDD
Sbjct: 1021 SIRIRPRDWTNYSLTEKKMRDLADRTSTIRNQIEKITKDKKNILITPDINISPNETSCDD 1080

Query: 762  KRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLK 583
            KRL+SPKKIWQILKRRS+R IRKCHYF+ +FIE IYIDIF      I+NI +  V+ILLK
Sbjct: 1081 KRLKSPKKIWQILKRRSSRLIRKCHYFIKLFIEGIYIDIF----LPIINILKTSVQILLK 1136

Query: 582  SKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKSIF---NKNSQIFCDLASLSQA 412
            SKK ITDKYS NDETN        +N I+F STI+K  S     NKNSQIFCDL+SLSQA
Sbjct: 1137 SKKLITDKYSYNDETN--------QNTIHFISTIKKPISNIINKNKNSQIFCDLSSLSQA 1188

Query: 411  YVFYKLSQTQVINKYHLKSVFQYHGTIPF--LKDRIKYFIGAQGIFHCESRHKKLHSFGM 238
            YVFYKLSQTQVINKYH KS+FQY+GTIPF  +KDRI+ F G QGIFH ESRHKKL  FG+
Sbjct: 1189 YVFYKLSQTQVINKYHSKSLFQYNGTIPFINIKDRIQKFCGTQGIFHSESRHKKLQFFGI 1248

Query: 237  N--EWKSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIH 64
            N   WKSWLM NDHY+YDLSQT WSRL+PQKWRN I Q+FMV+ TN  NFD Y+K+QLIH
Sbjct: 1249 NTWTWKSWLMSNDHYKYDLSQTRWSRLVPQKWRNRIKQNFMVKNTNSINFDLYEKEQLIH 1308

Query: 63   YEKQNNYAVNSLWSQK 16
            YEKQNNYAVNSL SQK
Sbjct: 1309 YEKQNNYAVNSLPSQK 1324


>ref|YP_009169409.1| hypothetical chloroplast RF1 (chloroplast) [Clematis terniflora]
            gi|687814908|gb|AIQ81150.1| hypothetical chloroplast RF1
            (chloroplast) [Clematis terniflora]
          Length = 1876

 Score =  434 bits (1117), Expect = e-119
 Identities = 227/315 (72%), Positives = 264/315 (83%), Gaps = 6/315 (1%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDD 763
            +IRIRS DWTN+SLTEKK+KDLADKT+TIRN+IEK++K+KKNIF+TT I ISPNET+CDD
Sbjct: 1029 SIRIRSADWTNYSLTEKKMKDLADKTNTIRNEIEKITKEKKNIFITTYINISPNETNCDD 1088

Query: 762  KRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLK 583
            KRLESPKKIWQILKRRSAR +RK HYF ++FIERIY    DIFLRII NIP I V+ILL+
Sbjct: 1089 KRLESPKKIWQILKRRSARLMRKYHYFFDLFIERIY---KDIFLRII-NIPRIHVKILLQ 1144

Query: 582  SKKQITDKYSSNDETNKK--RIDEKTKNPIYFFSTIRK-RKSIFNKNSQIFCDLASLSQA 412
             K +ITD  +SNDETNKK   ID+  KN IYF STI+K   +I N+NSQIFCDL+SLSQA
Sbjct: 1145 LKNKITD--NSNDETNKKGFYIDKNKKNKIYFISTIKKWISNIRNQNSQIFCDLSSLSQA 1202

Query: 411  YVFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKY-FIGAQGIFHCESRHKKLHSFGMN 235
            YVFYKLSQ QVINK++LK +FQYHGTIPF+KDRIK  F G  GIFH ESR+ KL  F MN
Sbjct: 1203 YVFYKLSQAQVINKHYLKFLFQYHGTIPFIKDRIKKDFFGTHGIFHFESRYNKLSGFKMN 1262

Query: 234  EWKSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEK 55
            EWKSWLMGNDHY+Y+LSQT WSRL+P+ WRN INQ+FMVQ  N  NF SY+KD+LIHY+K
Sbjct: 1263 EWKSWLMGNDHYKYNLSQTRWSRLVPKNWRNRINQNFMVQNKNSTNFYSYEKDRLIHYKK 1322

Query: 54   QNN--YAVNSLWSQK 16
            +NN  YAVNSL +QK
Sbjct: 1323 ENNYAYAVNSLPNQK 1337


>gb|AIZ57585.1| hypothetical chloroplast RF1 (chloroplast) [Clematis fusca var.
            coreana]
          Length = 1878

 Score =  433 bits (1113), Expect = e-118
 Identities = 226/316 (71%), Positives = 261/316 (82%), Gaps = 4/316 (1%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDD 763
            +IRIRS DWTN+SLTEKK+KDLADKT+TIRN+IEK++K+KKNIF+TT I ISPNET+CDD
Sbjct: 1033 SIRIRSADWTNYSLTEKKMKDLADKTNTIRNQIEKITKEKKNIFITTYINISPNETNCDD 1092

Query: 762  KRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLK 583
            KRLES KKIWQILKRRSAR +RK HYF  +FIERIY    DIFLRII NIP I V+ILL+
Sbjct: 1093 KRLESSKKIWQILKRRSARLMRKYHYFFYLFIERIY---KDIFLRII-NIPRIHVKILLQ 1148

Query: 582  SKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRK-RKSIFNKNSQIFCDLASLSQAYV 406
             K +ITD  +SNDETNKK      KN IYF STI+K   +I NKNSQIFCDL+SLSQAYV
Sbjct: 1149 LKNKITD--NSNDETNKKGFYIDKKNKIYFISTIKKFISNIRNKNSQIFCDLSSLSQAYV 1206

Query: 405  FYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKY-FIGAQGIFHCESRHKKLHSFGMNEW 229
            FYKLSQ QVINK++LK +FQYHGTIPF+KDRIK  F G  GIFH ESR+ KL  F MNEW
Sbjct: 1207 FYKLSQAQVINKHYLKFLFQYHGTIPFIKDRIKKDFFGTHGIFHFESRYNKLSGFKMNEW 1266

Query: 228  KSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQN 49
            KSWLMGNDHY+Y+LSQT WSRL+PQ WRN INQ+FMVQ  N  NF SY+KD+LIHY+K+N
Sbjct: 1267 KSWLMGNDHYKYNLSQTRWSRLVPQNWRNRINQNFMVQNKNSTNFYSYEKDRLIHYKKEN 1326

Query: 48   N--YAVNSLWSQKKEI 7
            N  YAVNSL +QK ++
Sbjct: 1327 NYAYAVNSLQNQKDKL 1342


>gb|AKM98247.1| photosystem I assembly protein Ycf1 (chloroplast) [Pulsatilla
            pratensis] gi|844170446|gb|AKM98335.1| photosystem I
            assembly protein Ycf1 (chloroplast) [Pulsatilla
            pratensis]
          Length = 1894

 Score =  424 bits (1089), Expect = e-116
 Identities = 223/315 (70%), Positives = 258/315 (81%), Gaps = 4/315 (1%)
 Frame = -1

Query: 939  IRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDK 760
            IRIRS DWTN+SLTEKK+KDLADKT+TIRN+IEK++K+KKNIF+TT I ISPNET+CDDK
Sbjct: 1055 IRIRSADWTNYSLTEKKMKDLADKTNTIRNQIEKITKEKKNIFITTSINISPNETNCDDK 1114

Query: 759  RLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLKS 580
            RLESPKKI  +LKRRSAR +RKCHYF+N FIERIY DIF   LRII  IP I V+ILL+ 
Sbjct: 1115 RLESPKKI--LLKRRSARLMRKCHYFLNFFIERIYRDIF---LRIINIIPRIHVKILLQL 1169

Query: 579  KKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAYVF 403
            K +ITD  +SNDETNKK I   TKN I+  STI+K  S I N+NSQIFCDL+SLSQAYVF
Sbjct: 1170 KNKITD--NSNDETNKKGIYIDTKNIIFCISTIKKLISNISNQNSQIFCDLSSLSQAYVF 1227

Query: 402  YKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKY-FIGAQGIFHCESRHKKLHSFGMNEWK 226
            YKLSQ QVINK++ K +FQYHGTIPF+KDRIK  F G QGIFH ESR+KK   F MNEWK
Sbjct: 1228 YKLSQVQVINKHYFKFLFQYHGTIPFIKDRIKKDFFGTQGIFHSESRYKKFCGFKMNEWK 1287

Query: 225  SWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQNN 46
            SWLMGNDHY+Y+LS T WSRL+PQ WRN INQ+FMVQ TN  NF SY+KD LIHY+K  N
Sbjct: 1288 SWLMGNDHYKYNLSPTRWSRLVPQNWRNRINQNFMVQNTNSTNFYSYEKDLLIHYKKAKN 1347

Query: 45   --YAVNSLWSQKKEI 7
              YAVNSL ++K ++
Sbjct: 1348 YAYAVNSLPNRKDKL 1362


>gb|AKM98423.1| photosystem I assembly protein Ycf1 (chloroplast) [Pulsatilla
            vernalis] gi|844170719|gb|AKM98511.1| photosystem I
            assembly protein Ycf1 (chloroplast) [Pulsatilla vernalis]
          Length = 1887

 Score =  423 bits (1087), Expect = e-115
 Identities = 223/315 (70%), Positives = 257/315 (81%), Gaps = 4/315 (1%)
 Frame = -1

Query: 939  IRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDK 760
            IRIRS DWTN+SLTEKK+KDLADKT+TIRN+IEK++K+KKNIF+TT I ISPNET+CDDK
Sbjct: 1048 IRIRSADWTNYSLTEKKMKDLADKTNTIRNQIEKITKEKKNIFITTSINISPNETNCDDK 1107

Query: 759  RLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLKS 580
            RLESPKKI  +LKRRSAR +RKCHYF N FIERIY DIF   LRII  IP I V+ILL+ 
Sbjct: 1108 RLESPKKI--LLKRRSARLMRKCHYFFNFFIERIYRDIF---LRIINIIPRIHVKILLQL 1162

Query: 579  KKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAYVF 403
            K +ITD  +SNDETNKK I   TKN I+  STI+K  S I N+NSQIFCDL+SLSQAYVF
Sbjct: 1163 KNKITD--NSNDETNKKGIYIDTKNIIFCISTIKKLISNISNQNSQIFCDLSSLSQAYVF 1220

Query: 402  YKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKY-FIGAQGIFHCESRHKKLHSFGMNEWK 226
            YKLSQ QVINK++ K +FQYHGTIPF+KDRIK  F G QGIFH ESR+KK   F MNEWK
Sbjct: 1221 YKLSQVQVINKHYFKFLFQYHGTIPFIKDRIKKDFFGTQGIFHSESRYKKFCGFKMNEWK 1280

Query: 225  SWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQNN 46
            SWLMGNDHY+Y+LS T WSRL+PQ WRN INQ+FMVQ TN  NF SY+KD LIHY+K  N
Sbjct: 1281 SWLMGNDHYKYNLSPTRWSRLVPQNWRNRINQNFMVQNTNSTNFYSYEKDLLIHYKKAKN 1340

Query: 45   --YAVNSLWSQKKEI 7
              YAVNSL ++K ++
Sbjct: 1341 YAYAVNSLPNRKDKL 1355


>gb|AKM98159.1| photosystem I assembly protein Ycf1 (chloroplast) [Anemone patens]
          Length = 1887

 Score =  423 bits (1087), Expect = e-115
 Identities = 223/315 (70%), Positives = 257/315 (81%), Gaps = 4/315 (1%)
 Frame = -1

Query: 939  IRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDK 760
            IRIRS DWTN+SLTEKK+KDLADKT+TIRN+IEK++K+KKNIF+TT I ISPNET+CDDK
Sbjct: 1048 IRIRSADWTNYSLTEKKMKDLADKTNTIRNQIEKITKEKKNIFITTSINISPNETNCDDK 1107

Query: 759  RLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLKS 580
            RLESPKKI  +LKRRSAR +RKCHYF N FIERIY DIF   LRII  IP I V+ILL+ 
Sbjct: 1108 RLESPKKI--LLKRRSARLMRKCHYFFNFFIERIYRDIF---LRIINIIPRIHVKILLQL 1162

Query: 579  KKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAYVF 403
            K +ITD  +SNDETNKK I   TKN I+  STI+K  S I N+NSQIFCDL+SLSQAYVF
Sbjct: 1163 KNKITD--NSNDETNKKGIYIDTKNIIFCISTIKKLISNISNQNSQIFCDLSSLSQAYVF 1220

Query: 402  YKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKY-FIGAQGIFHCESRHKKLHSFGMNEWK 226
            YKLSQ QVINK++ K +FQYHGTIPF+KDRIK  F G QGIFH ESR+KK   F MNEWK
Sbjct: 1221 YKLSQVQVINKHYFKFLFQYHGTIPFIKDRIKKDFFGTQGIFHSESRYKKFCGFKMNEWK 1280

Query: 225  SWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQNN 46
            SWLMGNDHY+Y+LS T WSRL+PQ WRN INQ+FMVQ TN  NF SY+KD LIHY+K  N
Sbjct: 1281 SWLMGNDHYKYNLSPTRWSRLVPQNWRNRINQNFMVQNTNSTNFYSYEKDLLIHYKKAKN 1340

Query: 45   --YAVNSLWSQKKEI 7
              YAVNSL ++K ++
Sbjct: 1341 YAYAVNSLPNRKDKL 1355


>gb|AKM98071.1| photosystem I assembly protein Ycf1 (chloroplast) [Anemone patens]
          Length = 1890

 Score =  423 bits (1087), Expect = e-115
 Identities = 223/315 (70%), Positives = 257/315 (81%), Gaps = 4/315 (1%)
 Frame = -1

Query: 939  IRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDK 760
            IRIRS DWTN+SLTEKK+KDLADKT+TIRN+IEK++K+KKNIF+TT I ISPNET+CDDK
Sbjct: 1051 IRIRSADWTNYSLTEKKMKDLADKTNTIRNQIEKITKEKKNIFITTSINISPNETNCDDK 1110

Query: 759  RLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLKS 580
            RLESPKKI  +LKRRSAR +RKCHYF N FIERIY DIF   LRII  IP I V+ILL+ 
Sbjct: 1111 RLESPKKI--LLKRRSARLMRKCHYFFNFFIERIYRDIF---LRIINIIPRIHVKILLQL 1165

Query: 579  KKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAYVF 403
            K +ITD  +SNDETNKK I   TKN I+  STI+K  S I N+NSQIFCDL+SLSQAYVF
Sbjct: 1166 KNKITD--NSNDETNKKGIYIDTKNIIFCISTIKKLISNISNQNSQIFCDLSSLSQAYVF 1223

Query: 402  YKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKY-FIGAQGIFHCESRHKKLHSFGMNEWK 226
            YKLSQ QVINK++ K +FQYHGTIPF+KDRIK  F G QGIFH ESR+KK   F MNEWK
Sbjct: 1224 YKLSQVQVINKHYFKFLFQYHGTIPFIKDRIKKDFFGTQGIFHSESRYKKFCGFKMNEWK 1283

Query: 225  SWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQNN 46
            SWLMGNDHY+Y+LS T WSRL+PQ WRN INQ+FMVQ TN  NF SY+KD LIHY+K  N
Sbjct: 1284 SWLMGNDHYKYNLSPTRWSRLVPQNWRNRINQNFMVQNTNSTNFYSYEKDLLIHYKKAKN 1343

Query: 45   --YAVNSLWSQKKEI 7
              YAVNSL ++K ++
Sbjct: 1344 YAYAVNSLPNRKDKL 1358


>ref|YP_740709.1| hypothetical chloroplast RF1 [Nandina domestica]
            gi|118574757|sp|Q09FQ2.1|TI214_NANDO RecName:
            Full=Protein TIC 214; AltName: Full=Translocon at the
            inner envelope membrane of chloroplasts 214;
            Short=AtTIC214 gi|114054530|gb|ABI49923.1| hypothetical
            chloroplast RF1 (chloroplast) [Nandina domestica]
          Length = 1843

 Score =  393 bits (1009), Expect = e-106
 Identities = 202/304 (66%), Positives = 230/304 (75%), Gaps = 3/304 (0%)
 Frame = -1

Query: 939  IRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDK 760
            IRIRS+DW N+SLT KKIKD+ D+TSTIRN+IEK++KDKK +FLT D  I+PN+  CDDK
Sbjct: 993  IRIRSLDWINYSLTAKKIKDVVDRTSTIRNQIEKITKDKKKLFLTPDRNINPNKIGCDDK 1052

Query: 759  RLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLKS 580
             LES KKIWQ LKRRS R IRKC+YF+  FIERIY DI    L  I+N   I V++ L++
Sbjct: 1053 GLESLKKIWQKLKRRSNRLIRKCYYFLKFFIERIYTDI----LFCIINSLRIKVKLFLEA 1108

Query: 579  KKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKSIFNK---NSQIFCDLASLSQAY 409
            K ++  K SSNDETNKK IDE   N I+F STI+K  S  N    NSQIFCDL SLSQAY
Sbjct: 1109 KNKLFYKNSSNDETNKKGIDETNPNTIHFISTIKKSLSNINNSNNNSQIFCDLDSLSQAY 1168

Query: 408  VFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNEW 229
            VFYKLSQTQV NKYHL+SV QY GT+ FLKDRIK   G QGIFH ES HKKL +F MNEW
Sbjct: 1169 VFYKLSQTQVFNKYHLRSVLQYRGTLLFLKDRIKDSFGTQGIFHSESGHKKLRNFRMNEW 1228

Query: 228  KSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQN 49
            K+WL G  HYQYD SQT WSRL+PQKWRN I+Q  MVQ  N    D Y+KDQLIHYEKQN
Sbjct: 1229 KNWLRGRYHYQYDFSQTRWSRLVPQKWRNRIHQRCMVQTKNSTYSDLYEKDQLIHYEKQN 1288

Query: 48   NYAV 37
            NYAV
Sbjct: 1289 NYAV 1292


>ref|YP_009163076.1| hypothetical chloroplast RF1 (chloroplast) [Sinopodophyllum
            hexandrum] gi|909719774|gb|AKT94042.1| hypothetical
            chloroplast RF1 (chloroplast) [Sinopodophyllum hexandrum]
          Length = 1882

 Score =  386 bits (991), Expect = e-104
 Identities = 196/313 (62%), Positives = 242/313 (77%), Gaps = 3/313 (0%)
 Frame = -1

Query: 936  RIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDKR 757
            +IRS DW N+SLT KKIKDLAD+TSTIR++I+K++KDKK IF+T ++ ISPNETSCDDK+
Sbjct: 1023 QIRSGDWINYSLTAKKIKDLADRTSTIRDQIKKITKDKKKIFITPELNISPNETSCDDKK 1082

Query: 756  LESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLKSK 577
            LES + IW+I KRRS R IRK HYF+  FIE+IYIDI    L  I+N   I+ ++ L+SK
Sbjct: 1083 LESQQGIWRIFKRRSTRLIRKWHYFLKFFIEKIYIDI----LLCIINSLRINRKLFLESK 1138

Query: 576  KQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAYVFY 400
            K+I  KYSSN+ETN++ IDE     I+F STI+K  S I  KNS IFCDLASLSQAYVFY
Sbjct: 1139 KKIFYKYSSNNETNQEGIDETNPKTIHFISTIKKALSTISKKNSPIFCDLASLSQAYVFY 1198

Query: 399  KLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGI--FHCESRHKKLHSFGMNEWK 226
            KLSQTQVINKY+L+SV QYHGTI F+KD+IK   G Q +  FH ES HKK+ +F +NEWK
Sbjct: 1199 KLSQTQVINKYYLRSVLQYHGTILFIKDKIKDSFGTQRLSHFHLESGHKKIRNFRLNEWK 1258

Query: 225  SWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQNN 46
            +WL G  HY YDLS+T WSRL+PQKWRN   +S + Q  N  NFD Y+KDQ+IHYEKQNN
Sbjct: 1259 NWLRGPSHYHYDLSKTRWSRLVPQKWRNRTQKSCIGQTKNSTNFDLYEKDQIIHYEKQNN 1318

Query: 45   YAVNSLWSQKKEI 7
            YAV SL ++K ++
Sbjct: 1319 YAVESLLNKKDKL 1331


>gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis corallina]
          Length = 1909

 Score =  382 bits (980), Expect = e-103
 Identities = 192/317 (60%), Positives = 238/317 (75%), Gaps = 3/317 (0%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDD 763
            +I+IRSMDWTN+SLTEKK+KDL D+TSTIRN+IE+++KDKK  FL  +I ISPN+TS D 
Sbjct: 1061 SIQIRSMDWTNYSLTEKKMKDLTDRTSTIRNQIERITKDKKKGFLIPEINISPNKTSYDA 1120

Query: 762  KRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLK 583
            KRLESPK IWQ++KRR+AR IRK HYF+   IERIYIDIF      I+NIP ++ ++ L+
Sbjct: 1121 KRLESPKNIWQVVKRRNARLIRKSHYFLKFLIERIYIDIF----LCIINIPRVNAQLFLE 1176

Query: 582  SKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKSIFN---KNSQIFCDLASLSQA 412
            S K++ DKY  N+E  ++RID+  +N I+F STI+K     N   KNSQIFCDL+SLSQA
Sbjct: 1177 STKKMIDKYIYNNEATQERIDKTNQNTIHFISTIKKSFYKINNSKKNSQIFCDLSSLSQA 1236

Query: 411  YVFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNE 232
            YVFYKL+Q QVIN Y L+SV QYHGT  FLK + K + G QGIFH E RHKKL + GMN+
Sbjct: 1237 YVFYKLAQAQVINLYKLRSVLQYHGTSFFLKKKRKDYFGTQGIFHSELRHKKLRNSGMNQ 1296

Query: 231  WKSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQ 52
            WK+WL G  HYQYDLSQ  WSRL+PQKWRN IN+    Q  +   +DSY+KDQLIHY+KQ
Sbjct: 1297 WKNWLKG--HYQYDLSQIRWSRLVPQKWRNRINERRTAQNKDLNKWDSYEKDQLIHYKKQ 1354

Query: 51   NNYAVNSLWSQKKEINK 1
            N+Y   SL +QK    K
Sbjct: 1355 NDYEAGSLLNQKDNFKK 1371


>ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphylla]
            gi|182702240|sp|A6MM95.1|TI214_BUXMI RecName:
            Full=Protein TIC 214; AltName: Full=Translocon at the
            inner envelope membrane of chloroplasts 214;
            Short=AtTIC214 (chloroplast) [Buxus microphylla]
            gi|146762344|gb|ABQ45308.1| hypothetical chloroplast RF1
            [Buxus microphylla]
          Length = 1859

 Score =  379 bits (973), Expect = e-102
 Identities = 193/315 (61%), Positives = 239/315 (75%), Gaps = 1/315 (0%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDD 763
            +IRIRSMDWTN  LTEKK+KDL D+T+TIR KIE++ +DKK  FLT++I ISPNE SCD+
Sbjct: 1017 SIRIRSMDWTNSLLTEKKMKDLTDRTNTIRKKIERIKRDKKKTFLTSEIKISPNERSCDN 1076

Query: 762  KRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLK 583
            K+LESPK IWQILKRR+ R IRK +YF+   IERIYID     L  I+NIP I   + L+
Sbjct: 1077 KKLESPKNIWQILKRRNTRLIRKWNYFIKFLIERIYIDA----LPYIINIPRIHGRLFLE 1132

Query: 582  SKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAYV 406
            SKK+I DK   N E N++ IDE  KN  +F STI++  S   NKNS+IFCDL+SLSQAYV
Sbjct: 1133 SKKKIMDKSIYNHEKNQEGIDETNKNTTHFISTIKRPLSNNNNKNSKIFCDLSSLSQAYV 1192

Query: 405  FYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNEWK 226
            FYKLSQTQVINKY+L+SV QYHG   F K+RI+YF G +GIF+ +S+HK+L +FGMNEWK
Sbjct: 1193 FYKLSQTQVINKYNLRSVLQYHGASLFPKERIRYFCGTRGIFNSQSKHKRLRNFGMNEWK 1252

Query: 225  SWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQNN 46
            +WL   DHYQYDLSQ  WSRL+ QKWRN +NQ   VQ  + +   SY+KDQLIHYE +++
Sbjct: 1253 NWL--RDHYQYDLSQIKWSRLVLQKWRNRVNQRRTVQNKDSKKLGSYEKDQLIHYETEHD 1310

Query: 45   YAVNSLWSQKKEINK 1
            Y V SL SQK+ + K
Sbjct: 1311 YEVYSLPSQKENLKK 1325


>ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera]
            gi|118574755|sp|Q0G9G1.1|TI214_LIRTU RecName:
            Full=Protein TIC 214; AltName: Full=Translocon at the
            inner envelope membrane of chloroplasts 214;
            Short=AtTIC214 gi|113201052|gb|ABI32567.1| hypothetical
            chloroplast RF1 [Liriodendron tulipifera]
          Length = 1835

 Score =  379 bits (972), Expect = e-102
 Identities = 197/314 (62%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = -1

Query: 939  IRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDK 760
            IRIRS+DWTN+SLTEKK+KDLAD+T+TIRNKIE+++KDK+ IFLT DI ISPNET CDDK
Sbjct: 1003 IRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPDIKISPNETGCDDK 1062

Query: 759  RLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLKS 580
            R ES K IWQI KRRSAR IRK HYFM  FIERIY+DIF       +NIP  +  + L+S
Sbjct: 1063 RSESQKHIWQISKRRSARLIRKWHYFMKSFIERIYMDIF----LCTINIPRRNAHLFLES 1118

Query: 579  KKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAYVF 403
             K+I DK   NDE NK+ IDE  +N I+F STI+K  S I N  SQI+CDL+SLSQAYVF
Sbjct: 1119 TKKIIDKDIYNDERNKEGIDETNQNAIHFISTIKKSLSNISNNKSQIYCDLSSLSQAYVF 1178

Query: 402  YKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNEWKS 223
            Y L Q QVINKY+L+ V QY G   FLKDRIK   G +GI   +SR KK  + GMNEWK+
Sbjct: 1179 YNLLQIQVINKYYLRFVLQYRGAYLFLKDRIKDHFGTRGILDAKSRPKKPPNSGMNEWKN 1238

Query: 222  WLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQNNY 43
            WL G  HYQY+LSQT WSRL+PQKWRN +NQ   +Q  + +  DSY+KDQ IHYEKQNNY
Sbjct: 1239 WLRG--HYQYNLSQTRWSRLVPQKWRNRVNQRRTIQNKDSKK-DSYEKDQFIHYEKQNNY 1295

Query: 42   AVNSLWSQKKEINK 1
             VNSL ++K++  K
Sbjct: 1296 VVNSLPNKKEKFKK 1309


>ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [Tetracentron sinense]
            gi|479279261|gb|AGJ72115.1| hypothetical chloroplast RF1
            (chloroplast) [Tetracentron sinense]
          Length = 1895

 Score =  378 bits (971), Expect = e-102
 Identities = 197/317 (62%), Positives = 243/317 (76%), Gaps = 3/317 (0%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDD 763
            +IRIR MDWTN+SLTEKK+KDLAD+TSTIRNKIE+++KDK+  FLT +I ISPNE SCDD
Sbjct: 1040 SIRIRYMDWTNYSLTEKKMKDLADRTSTIRNKIERITKDKRKKFLTREINISPNERSCDD 1099

Query: 762  KRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLK 583
            KRLESP+ IW+I+KRRSAR IRK + FM  FI++IYID     L  I+NI   + ++ L+
Sbjct: 1100 KRLESPQNIWRIIKRRSARLIRKWNSFMQFFIQKIYIDT----LLSIINISRSNAQLFLE 1155

Query: 582  SKKQIT--DKYSSNDETNKKRIDEKTKNPIYFFSTIRKR-KSIFNKNSQIFCDLASLSQA 412
            S K+I   D+   NDE N++RIDE  +N I+F STI K   +I  KNS  FCDL+SLSQA
Sbjct: 1156 STKKIKIFDQSIYNDEINQERIDEINQNTIHFISTIEKSLYNISKKNSTHFCDLSSLSQA 1215

Query: 411  YVFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNE 232
            YVFYKLSQTQVINKY+L+SVFQYHGT  FLKDRIK       IFH ES+HKKL + G+NE
Sbjct: 1216 YVFYKLSQTQVINKYNLRSVFQYHGTSIFLKDRIKDSFEKLKIFHYESKHKKLLNSGINE 1275

Query: 231  WKSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQ 52
            WK+WL G  HYQYDLSQ  WSRL+PQKWRN +NQ  MVQ  + + + SY+KDQLIHYEKQ
Sbjct: 1276 WKNWLRG--HYQYDLSQIRWSRLVPQKWRNRVNQRHMVQNKDSKKWGSYEKDQLIHYEKQ 1333

Query: 51   NNYAVNSLWSQKKEINK 1
            N+Y  ++L S+K+ + K
Sbjct: 1334 NDYDADALPSKKENLKK 1350


>ref|YP_001004231.2| hypothetical chloroplast RF1 [Ranunculus macranthus]
            gi|182705172|sp|A1XGT3.2|TI214_RANMC RecName:
            Full=Protein TIC 214; AltName: Full=Translocon at the
            inner envelope membrane of chloroplasts 214;
            Short=AtTIC214 (chloroplast) [Ranunculus macranthus]
            gi|124074979|gb|ABC70801.2| hypothetical chloroplast RF1
            (chloroplast) [Ranunculus macranthus]
          Length = 1788

 Score =  377 bits (968), Expect = e-102
 Identities = 193/317 (60%), Positives = 241/317 (76%), Gaps = 5/317 (1%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTT--DITISPNETSC 769
            AIRIRS+DWTN+SLTEKK+KD+AD+ +TIRN+IEK++KDKK+IFLTT  D  I PN+TS 
Sbjct: 961  AIRIRSIDWTNYSLTEKKMKDMADRINTIRNQIEKITKDKKSIFLTTTTDRNIRPNKTSW 1020

Query: 768  DDKRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEIL 589
            DDKRLE  K  WQI+KR  A+ IRKC++F +  IE+I IDIF      I+NIP  +++IL
Sbjct: 1021 DDKRLEQSKIFWQIVKRGRAKIIRKCNFFFHFCIEKICIDIF----LSIINIPSRNIQIL 1076

Query: 588  LKSKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRK---RKSIFNKNSQIFCDLASLS 418
             + KK+I DKYS NDET K        NPI+F STI++   + +  +  SQI CDL+ LS
Sbjct: 1077 FQQKKKINDKYSYNDETKK--------NPIHFISTIKRSIYKTTNTSNKSQILCDLSFLS 1128

Query: 417  QAYVFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGM 238
            QAYVFYKLSQ QV NKY+LKS+FQYHGTIPF+KD+IK F G QGIF+ ESRHK  H FGM
Sbjct: 1129 QAYVFYKLSQIQVSNKYNLKSLFQYHGTIPFIKDKIKIFFGTQGIFNSESRHKNFHDFGM 1188

Query: 237  NEWKSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYE 58
            NEW+SWLMGND YQY+LSQT WS L+PQKWRN IN++      N  NF  Y+K+ LIHYE
Sbjct: 1189 NEWQSWLMGNDQYQYNLSQTCWSGLVPQKWRNRINKNL----ANSSNFYFYEKEPLIHYE 1244

Query: 57   KQNNYAVNSLWSQKKEI 7
            K+ NYAVNSL S+++++
Sbjct: 1245 KEKNYAVNSLPSRREKL 1261


>ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron aralioides]
            gi|290489080|gb|ADD30924.1| putative RF1 protein
            (chloroplast) [Trochodendron aralioides]
            gi|479279354|gb|AGJ72207.1| hypothetical chloroplast RF1
            (chloroplast) [Trochodendron aralioides]
          Length = 1896

 Score =  376 bits (966), Expect = e-101
 Identities = 198/319 (62%), Positives = 244/319 (76%), Gaps = 5/319 (1%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDD 763
            +IRIR MDWTN+SLTEKK+KDLAD+TSTIRNKIE+++KDKK  FLT +I I+PNE SCDD
Sbjct: 1042 SIRIRYMDWTNYSLTEKKMKDLADRTSTIRNKIERITKDKKKKFLTREININPNERSCDD 1101

Query: 762  KRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLK 583
            KRLESP+ IWQI+KRRSAR IRK +YFM  FIE+IYID     L  I+NI   + ++ L+
Sbjct: 1102 KRLESPQNIWQIVKRRSARLIRKWNYFMQFFIEKIYIDT----LLSIINISRSNAQLFLE 1157

Query: 582  S--KKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKR-KSIFNKNSQIFCDLASLSQA 412
            S  K +I D+   NDE N++RIDE  +N I+F STI+K   +I N NSQ FCDL+SLSQA
Sbjct: 1158 STKKMKIFDQSIYNDEINEERIDETNQNTIHFISTIKKSLYNISNNNSQNFCDLSSLSQA 1217

Query: 411  YVFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNE 232
            YVFYKLSQTQVINKY+L+SV QYHGT  FLK+RIK       IFH +S+HKKL + GMNE
Sbjct: 1218 YVFYKLSQTQVINKYNLRSVLQYHGTSLFLKERIKDSFEKLKIFHSKSKHKKLLNSGMNE 1277

Query: 231  WKSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNP--RNFDSYKKDQLIHYE 58
            WK+WL G  HYQYDLSQ  WSRL+PQKW+N +NQ  MVQ  +   +   SY+KDQLIHYE
Sbjct: 1278 WKNWLRG--HYQYDLSQIRWSRLVPQKWQNRVNQHHMVQNKDKDLKKRGSYEKDQLIHYE 1335

Query: 57   KQNNYAVNSLWSQKKEINK 1
            KQN+Y  +SL ++K+ + K
Sbjct: 1336 KQNDYEGDSLLNKKENLKK 1354


>ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana]
            gi|491650429|gb|AGL13489.1| hypothetical chloroplast RF19
            (chloroplast) [Liquidambar formosana]
          Length = 1878

 Score =  375 bits (963), Expect = e-101
 Identities = 191/316 (60%), Positives = 238/316 (75%), Gaps = 2/316 (0%)
 Frame = -1

Query: 942  AIRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDD 763
            +I+ RSMDWTN+SL EKK KDL D+TSTIRN+IEK++KDKK  FLT +I ISPN+ S   
Sbjct: 1047 SIQFRSMDWTNYSLIEKKTKDLTDRTSTIRNQIEKITKDKKKEFLTPEINISPNKKSHKS 1106

Query: 762  KRLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILLK 583
            KRLESP+K WQILKRR+ R IRK HYF+  FIERIYIDI    L  I+NIP+I+ ++ L+
Sbjct: 1107 KRLESPQKFWQILKRRNTRLIRKSHYFIKFFIERIYIDI----LLCIINIPQINAQLFLE 1162

Query: 582  SKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKSI--FNKNSQIFCDLASLSQAY 409
            S K+  DKY  N+E N++RID+  +N I+F  ++    +I   NKNSQIF DL+SLSQAY
Sbjct: 1163 STKKTIDKYIYNNEANQERIDKTNQNTIHFIKSLSNISNISNINKNSQIFFDLSSLSQAY 1222

Query: 408  VFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNEW 229
            VFYKLSQTQVIN Y L+SV QYHGT  FLK+ IK + GAQG  H E RHKKL + GMN+W
Sbjct: 1223 VFYKLSQTQVINLYKLRSVIQYHGTSLFLKNEIKDYFGAQG--HSELRHKKLRNSGMNQW 1280

Query: 228  KSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSYKKDQLIHYEKQN 49
            K+WL G  HYQYDLS+  WSRL+PQKWRN +NQ  M Q  + + +DSY+KDQLIHYEK+N
Sbjct: 1281 KNWLRG--HYQYDLSRIRWSRLVPQKWRNRVNQRCMAQNKDLKKWDSYEKDQLIHYEKEN 1338

Query: 48   NYAVNSLWSQKKEINK 1
            NY V+SL ++ +   K
Sbjct: 1339 NYEVDSLQNKTENFKK 1354


>ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
            grandiflora] gi|372862899|gb|AEX98975.1| photosystem I
            assembly protein Ycf1 (chloroplast) [Magnolia
            grandiflora]
          Length = 1843

 Score =  375 bits (963), Expect = e-101
 Identities = 199/318 (62%), Positives = 239/318 (75%), Gaps = 5/318 (1%)
 Frame = -1

Query: 939  IRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDK 760
            IRIRS+DWTN+SLTEKK+KDLAD+T+TIRNKIE+++KDK+ IFLT +  ISPNET CDDK
Sbjct: 1010 IRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDK 1069

Query: 759  RLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILL-- 586
            R ES K IWQI KR  AR IRK HYFM  FIERIY+DIF       +NIP I+ ++ L  
Sbjct: 1070 RSESQKHIWQISKRGGARLIRKWHYFMKSFIERIYMDIF----LCNINIPRINAQLFLEF 1125

Query: 585  KSKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAY 409
            +S K+I DK   NDE NK+ IDE  +N I+F STI+K  S I NK SQI+CDL+SLSQAY
Sbjct: 1126 ESTKKIIDKDIYNDERNKEGIDETNQNAIHFISTIKKSLSNISNKKSQIYCDLSSLSQAY 1185

Query: 408  VFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNEW 229
            VFY LSQ Q+INKY+L+SV QY G   FLKDRIK   G +GI   +SR KKL + GMNEW
Sbjct: 1186 VFYNLSQIQIINKYYLRSVLQYRGAYLFLKDRIKDHFGTRGILDTKSRSKKLPNSGMNEW 1245

Query: 228  KSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSY--KKDQLIHYEK 55
            K+WL G  HYQY+ SQT WS+L+PQKWRN +NQ  M+Q  + +  DSY  +KDQLIHYEK
Sbjct: 1246 KNWLRG--HYQYNFSQTRWSKLVPQKWRNRVNQRRMIQNKDSKK-DSYEKEKDQLIHYEK 1302

Query: 54   QNNYAVNSLWSQKKEINK 1
            QNNY VNSL SQK++  K
Sbjct: 1303 QNNYVVNSLPSQKEKFKK 1320


>gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia denudata]
          Length = 1863

 Score =  375 bits (963), Expect = e-101
 Identities = 200/318 (62%), Positives = 239/318 (75%), Gaps = 5/318 (1%)
 Frame = -1

Query: 939  IRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDK 760
            IRIRS+DWTN+SLTEKK+KDLAD+T+TIRNKIE+++KDK+ IFLT +  ISPNET CDDK
Sbjct: 1030 IRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDK 1089

Query: 759  RLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILL-- 586
            R ES K IWQI KR  AR IRK HYFM  FIERIY+DIF       +NIP I+ +  L  
Sbjct: 1090 RSESQKHIWQISKRGGARLIRKWHYFMKSFIERIYMDIF----LCNINIPRINAQPFLEF 1145

Query: 585  KSKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAY 409
            +S K+I DK   NDE NK+ IDE  +N I+F STI+K  S I NK SQI+CDL+SLSQAY
Sbjct: 1146 ESTKKIIDKDIYNDERNKEGIDETNQNAIHFISTIKKSLSNISNKKSQIYCDLSSLSQAY 1205

Query: 408  VFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNEW 229
            VFY LSQ Q+INKY+L+SV QY G   FLKDRIK   G +GI   +SR KKL + GMNEW
Sbjct: 1206 VFYNLSQIQIINKYYLRSVLQYRGAYLFLKDRIKDHFGTRGILDAKSRSKKLPNSGMNEW 1265

Query: 228  KSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSY--KKDQLIHYEK 55
            K+WL G  HYQY+LSQT WS+L+PQKWRN +NQ  M+Q  + +  DSY  +KDQLIHYEK
Sbjct: 1266 KNWLRG--HYQYNLSQTRWSKLVPQKWRNRVNQRRMIQNKDSKK-DSYEKEKDQLIHYEK 1322

Query: 54   QNNYAVNSLWSQKKEINK 1
            QNNY VNSL SQK++  K
Sbjct: 1323 QNNYVVNSLPSQKEKFKK 1340


>ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|343887596|gb|AEM65275.1|
            Ycf1 [Magnolia denudata]
          Length = 1863

 Score =  375 bits (963), Expect = e-101
 Identities = 200/318 (62%), Positives = 239/318 (75%), Gaps = 5/318 (1%)
 Frame = -1

Query: 939  IRIRSMDWTNFSLTEKKIKDLADKTSTIRNKIEKMSKDKKNIFLTTDITISPNETSCDDK 760
            IRIRS+DWTN+SLTEKK+KDLAD+T+TIRNKIE+++KDK+ IFLT +  ISPNET CDDK
Sbjct: 1030 IRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPNRKISPNETGCDDK 1089

Query: 759  RLESPKKIWQILKRRSARPIRKCHYFMNIFIERIYIDIFDIFLRIIMNIPEIDVEILL-- 586
            R ES K IWQI KR  AR IRK HYFM  FIERIY+DIF       +NIP I+ +  L  
Sbjct: 1090 RSESQKHIWQISKRGGARLIRKWHYFMKSFIERIYMDIF----LCNINIPRINAQPFLEF 1145

Query: 585  KSKKQITDKYSSNDETNKKRIDEKTKNPIYFFSTIRKRKS-IFNKNSQIFCDLASLSQAY 409
            +S K+I DK   NDE NK+ IDE  +N I+F STI+K  S I NK SQI+CDL+SLSQAY
Sbjct: 1146 ESTKKIIDKDIYNDERNKEGIDETNQNAIHFISTIKKSLSNISNKKSQIYCDLSSLSQAY 1205

Query: 408  VFYKLSQTQVINKYHLKSVFQYHGTIPFLKDRIKYFIGAQGIFHCESRHKKLHSFGMNEW 229
            VFY LSQ Q+INKY+L+SV QY G   FLKDRIK   G +GI   +SR KKL + GMNEW
Sbjct: 1206 VFYNLSQIQIINKYYLRSVLQYRGAYLFLKDRIKDHFGTRGILDAKSRSKKLPNSGMNEW 1265

Query: 228  KSWLMGNDHYQYDLSQTTWSRLLPQKWRNGINQSFMVQKTNPRNFDSY--KKDQLIHYEK 55
            K+WL G  HYQY+LSQT WS+L+PQKWRN +NQ  M+Q  + +  DSY  +KDQLIHYEK
Sbjct: 1266 KNWLRG--HYQYNLSQTRWSKLVPQKWRNRVNQRRMIQNKDSKK-DSYEKEKDQLIHYEK 1322

Query: 54   QNNYAVNSLWSQKKEINK 1
            QNNY VNSL SQK++  K
Sbjct: 1323 QNNYVVNSLPSQKEKFKK 1340