BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00009322
         (2325 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28814.3| unnamed protein product [Vitis vinifera]             1009   0.0  
ref|XP_010657210.1| PREDICTED: DNA repair protein RAD16 [Vitis v...  1008   0.0  
ref|XP_010244485.1| PREDICTED: DNA repair protein RAD16 [Nelumbo...  1005   0.0  
ref|XP_006342255.1| PREDICTED: DNA repair protein RAD16-like [So...   990   0.0  
ref|XP_011463401.1| PREDICTED: ATP-dependent helicase rhp16 isof...   985   0.0  
ref|XP_011463393.1| PREDICTED: ATP-dependent helicase rhp16 isof...   985   0.0  
ref|XP_009627930.1| PREDICTED: DNA repair protein RAD16 [Nicotia...   982   0.0  
ref|XP_004240150.1| PREDICTED: DNA repair protein RAD16-like [So...   982   0.0  
ref|XP_009795276.1| PREDICTED: DNA repair protein RAD16 isoform ...   979   0.0  
ref|XP_009795273.1| PREDICTED: DNA repair protein RAD16 isoform ...   979   0.0  
ref|XP_002320469.2| hypothetical protein POPTR_0014s15270g [Popu...   977   0.0  
ref|XP_007046386.1| Helicase protein with RING/U-box domain isof...   976   0.0  
ref|XP_007046385.1| Helicase protein with RING/U-box domain isof...   976   0.0  
gb|KJB30319.1| hypothetical protein B456_005G137100 [Gossypium r...   971   0.0  
gb|KJB30318.1| hypothetical protein B456_005G137100 [Gossypium r...   971   0.0  
gb|KJB30317.1| hypothetical protein B456_005G137100 [Gossypium r...   971   0.0  
ref|XP_012478613.1| PREDICTED: DNA repair protein RAD16 isoform ...   971   0.0  
ref|XP_012478612.1| PREDICTED: DNA repair protein RAD16 isoform ...   971   0.0  
gb|KHG22444.1| ATP-dependent helicase rhp16 [Gossypium arboreum]      971   0.0  
ref|XP_011047250.1| PREDICTED: DNA repair protein RAD16 isoform ...   968   0.0  

>emb|CBI28814.3| unnamed protein product [Vitis vinifera]
          Length = 964

 Score = 1009 bits (2608), Expect = 0.0
 Identities = 509/728 (69%), Positives = 580/728 (79%), Gaps = 2/728 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPSEINCTLV 2146
            LKQEES TRGGILADEMGMGKTIQAIALVL+KR I++ I                 CTLV
Sbjct: 291  LKQEESTTRGGILADEMGMGKTIQAIALVLSKREISQKI-----------------CTLV 333

Query: 2145 ICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEYRKN 1966
            ICPVVAVLQW NE+ RFT +GST+VLVYHGANR KS+ QFS+YDFV+TTYSIVEAEYRKN
Sbjct: 334  ICPVVAVLQWVNEIGRFTVKGSTKVLVYHGANRGKSIGQFSEYDFVITTYSIVEAEYRKN 393

Query: 1965 VMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKTKSE 1786
            VMPPK+KCV+C K F P KM++HLRYFCGPDAI           +   ELK S S  K +
Sbjct: 394  VMPPKQKCVFCRKLFYPHKMSIHLRYFCGPDAIKTDKQSKQKKKEPKLELKISDSNYKPK 453

Query: 1785 QVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSCLKQ 1606
            +                                      +    S   +  +E S+  ++
Sbjct: 454  K-------------------------------------HMGFGPSIENSAVDEQSTSTRK 476

Query: 1605 SILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLVRFL 1426
            SILHSV+W+RIILDEAHFIKDRRSNTA+AVLALES YKWALSGTPLQNRVGELYSL+RFL
Sbjct: 477  SILHSVKWDRIILDEAHFIKDRRSNTAKAVLALESEYKWALSGTPLQNRVGELYSLIRFL 536

Query: 1425 QITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEGRRA 1246
            +I PYSYY C+DCDC++LDYS +++C NC HKSVRHFCWWNKY+ATPIQ   +  EG+RA
Sbjct: 537  RIIPYSYYLCKDCDCRTLDYSSSTECPNCEHKSVRHFCWWNKYVATPIQAMGNIGEGQRA 596

Query: 1245 MILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQFNT 1066
            MILLKHK+LKSI+LRRTKKGRA+DLALPPRIV++RRDTLD+KEEDYY+S+YN+SQ QFNT
Sbjct: 597  MILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTLDIKEEDYYQSLYNESQAQFNT 656

Query: 1065 YIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQS--NTYNGEHECGICHDP 892
            Y+EAG LM+NYAHIFDLLTRLRQAVDHPYLV+YS+    ++ +  +T NGE  CGIC+DP
Sbjct: 657  YVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSRTSTLRAGNIVDTENGEQVCGICNDP 716

Query: 891  AEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTNIKGYR 712
             E PVVTSC H FCKACL D++  LGQVSCPSC KPLTVD +T ++P  +  KT IKG++
Sbjct: 717  LEDPVVTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTVDLTTSMDPGDRDMKTTIKGFK 776

Query: 711  CGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQKSGI 532
              SILNRI L +FQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLI+YSLQKSGI
Sbjct: 777  PSSILNRIRLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLQKSGI 836

Query: 531  QCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 352
             CVQLVGSM+M ARDAAI +FT++PDC+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAV
Sbjct: 837  TCVQLVGSMSMAARDAAISRFTNEPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 896

Query: 351  ERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALVKLTEA 172
            ERQAQDRIHRIGQYKPIRI RF+IE TIEERILKLQ KKELVFEGTVGGSSEAL KLTEA
Sbjct: 897  ERQAQDRIHRIGQYKPIRIVRFVIEKTIEERILKLQEKKELVFEGTVGGSSEALGKLTEA 956

Query: 171  DLRFLFST 148
            DL+FLF T
Sbjct: 957  DLKFLFIT 964


>ref|XP_010657210.1| PREDICTED: DNA repair protein RAD16 [Vitis vinifera]
          Length = 936

 Score = 1008 bits (2605), Expect = 0.0
 Identities = 517/737 (70%), Positives = 590/737 (80%), Gaps = 11/737 (1%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEP---------SLER 2173
            LKQEES TRGGILADEMGMGKTIQAIALVL+KR I++ I     CEP         S++ 
Sbjct: 221  LKQEESTTRGGILADEMGMGKTIQAIALVLSKREISQKI-----CEPKVVLRAPGSSMDL 275

Query: 2172 PSEINCTLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYS 1993
            P +I  TLVICPVVAVLQW NE+ RFT +GST+VLVYHGANR KS+ QFS+YDFV+TTYS
Sbjct: 276  P-KIKGTLVICPVVAVLQWVNEIGRFTVKGSTKVLVYHGANRGKSIGQFSEYDFVITTYS 334

Query: 1992 IVEAEYRKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELK 1813
            IVEAEYRKNVMPPK+KCV+C K F P KM++HLRYFCGPDAI           +   ELK
Sbjct: 335  IVEAEYRKNVMPPKQKCVFCRKLFYPHKMSIHLRYFCGPDAIKTDKQSKQKKKEPKLELK 394

Query: 1812 PSQSKTKSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAES 1633
             S S   +                               K  GF  G    +S+      
Sbjct: 395  ISDSVEDN--------GGECEGEKRKKDQPKPRKNYKPKKHMGF--GPSIENSAV----- 439

Query: 1632 NEDSSCLKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVG 1453
            +E S+  ++SILHSV+W+RIILDEAHFIKDRRSNTA+AVLALES YKWALSGTPLQNRVG
Sbjct: 440  DEQSTSTRKSILHSVKWDRIILDEAHFIKDRRSNTAKAVLALESEYKWALSGTPLQNRVG 499

Query: 1452 ELYSLVRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNS 1273
            ELYSL+RFL+I PYSYY C+DCDC++LDYS +++C NC HKSVRHFCWWNKY+ATPIQ  
Sbjct: 500  ELYSLIRFLRIIPYSYYLCKDCDCRTLDYSSSTECPNCEHKSVRHFCWWNKYVATPIQAM 559

Query: 1272 SSSYEGRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIY 1093
             +  EG+RAMILLKHK+LKSI+LRRTKKGRA+DLALPPRIV++RRDTLD+KEEDYY+S+Y
Sbjct: 560  GNIGEGQRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTLDIKEEDYYQSLY 619

Query: 1092 NDSQLQFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQS--NTYNGE 919
            N+SQ QFNTY+EAG LM+NYAHIFDLLTRLRQAVDHPYLV+YS+    ++ +  +T NGE
Sbjct: 620  NESQAQFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSRTSTLRAGNIVDTENGE 679

Query: 918  HECGICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQG 739
              CGIC+DP E PVVTSC H FCKACL D++  LGQVSCPSC KPLTVD +T ++P  + 
Sbjct: 680  QVCGICNDPLEDPVVTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTVDLTTSMDPGDRD 739

Query: 738  TKTNIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLI 559
             KT IKG++  SILNRI L +FQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLI
Sbjct: 740  MKTTIKGFKPSSILNRIRLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLI 799

Query: 558  HYSLQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFL 379
            +YSLQKSGI CVQLVGSM+M ARDAAI +FT++PDC+IFLMSLKAGGVALNLTVASHVFL
Sbjct: 800  NYSLQKSGITCVQLVGSMSMAARDAAISRFTNEPDCKIFLMSLKAGGVALNLTVASHVFL 859

Query: 378  MDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSS 199
            MDPWWNPAVERQAQDRIHRIGQYKPIRI RF+IE TIEERILKLQ KKELVFEGTVGGSS
Sbjct: 860  MDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIEKTIEERILKLQEKKELVFEGTVGGSS 919

Query: 198  EALVKLTEADLRFLFST 148
            EAL KLTEADL+FLF T
Sbjct: 920  EALGKLTEADLKFLFIT 936


>ref|XP_010244485.1| PREDICTED: DNA repair protein RAD16 [Nelumbo nucifera]
          Length = 952

 Score = 1005 bits (2599), Expect = 0.0
 Identities = 507/732 (69%), Positives = 580/732 (79%), Gaps = 6/732 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGA----DVCEPSLERPSEIN 2158
            +KQE+S  RGGILADEMGMGKTIQAIALVL K A  R   G+        PS   P ++ 
Sbjct: 229  MKQEDSELRGGILADEMGMGKTIQAIALVLAKHASHRSSTGSTGPLSSPGPSTALP-KVK 287

Query: 2157 CTLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAE 1978
            CTLVICPVVAV+QWA+E+ RFT +GST+VLVYHG N+KK + +FS++DFVLTTYS VEA+
Sbjct: 288  CTLVICPVVAVMQWADEIDRFTPKGSTKVLVYHGVNKKKIMNEFSEFDFVLTTYSTVEAD 347

Query: 1977 YRKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSK 1798
            YRKNVMPPKEKC+WCGK F PKKM VHL+YFCGP+A+           +G ++L  S+ K
Sbjct: 348  YRKNVMPPKEKCIWCGKLFCPKKMVVHLQYFCGPNAVKTAKQSKQVRKEGKHKLNYSEVK 407

Query: 1797 TKSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSS 1618
             K                                 + G         SS G   + +  +
Sbjct: 408  MKPPVQEDEVIEFEGSKVNGAGKKTKKQQKQEKRTMPG-------DISSNGRPTNLDQGT 460

Query: 1617 CLKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSL 1438
               +S LHSV+W RIILDEAH+IKDRRSNTA+ VLALESSYKWALSGTPLQNRVGELYSL
Sbjct: 461  PAGKSALHSVKWERIILDEAHYIKDRRSNTAKGVLALESSYKWALSGTPLQNRVGELYSL 520

Query: 1437 VRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYE 1258
            VRFLQI PYSYYFCRDCDCKSLDYS T+QC NC HKSVRHFCWWN++IA PIQ   +  +
Sbjct: 521  VRFLQIVPYSYYFCRDCDCKSLDYSSTTQCPNCVHKSVRHFCWWNRFIAKPIQCPKNVGD 580

Query: 1257 GRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQL 1078
            GRRAM+LLK+KLLK+IVLRRTKKGR++DLALPPRIV++RRD LD+KEE+YY+S+YN+SQL
Sbjct: 581  GRRAMVLLKNKLLKTIVLRRTKKGRSADLALPPRIVSLRRDRLDIKEEEYYKSLYNESQL 640

Query: 1077 QFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYN--GEHECGI 904
            QFNTY+EAG LM+NYAHIFDLLTRLRQAVDHPYLV+YSK    ++ S T    GE +CGI
Sbjct: 641  QFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTAALRNGSATDASIGEQDCGI 700

Query: 903  CHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTNI 724
            CHD AE PVVT+C H FCKACL DY+  L Q SCPSC KPLTVDF+ K+N E QGTKT I
Sbjct: 701  CHDAAEEPVVTACAHVFCKACLVDYSTTLEQGSCPSCSKPLTVDFTAKMNAEYQGTKTTI 760

Query: 723  KGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ 544
            KGYR  SIL+RI L +FQTSTKIDALREEIRFM+ERDGSAKGIVFSQFTSFLDLI Y+L 
Sbjct: 761  KGYRHSSILSRICLEDFQTSTKIDALREEIRFMIERDGSAKGIVFSQFTSFLDLISYALH 820

Query: 543  KSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 364
            KSG+ CVQLVGSM+MTAR+++IK+FTDDPDC+IFLMSLKAGGVALNLTVASHVFLMDPWW
Sbjct: 821  KSGLNCVQLVGSMSMTARNSSIKRFTDDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWW 880

Query: 363  NPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALVK 184
            NPAVERQAQDRIHRIGQYKPIRI RFIIE+TIEERILKLQ KKELVFEGT+GGSSEAL K
Sbjct: 881  NPAVERQAQDRIHRIGQYKPIRIIRFIIEDTIEERILKLQEKKELVFEGTIGGSSEALGK 940

Query: 183  LTEADLRFLFST 148
            LT  DLRFLF+T
Sbjct: 941  LTAEDLRFLFTT 952


>ref|XP_006342255.1| PREDICTED: DNA repair protein RAD16-like [Solanum tuberosum]
          Length = 892

 Score =  990 bits (2560), Expect = 0.0
 Identities = 499/738 (67%), Positives = 582/738 (78%), Gaps = 12/738 (1%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEP----SLERPSEIN 2158
            LKQEES  RGGILADEMGMGKT+QAIALVL KR + + I G+ +  P    S E P+ + 
Sbjct: 185  LKQEESTARGGILADEMGMGKTVQAIALVLAKRELGQVISGSSLLSPAPCTSQELPA-VK 243

Query: 2157 CTLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAE 1978
             TLVICPVVAV+QW +E+ RFT +GS ++LVYHGANR K++ +F++YDFV+TTYS VEAE
Sbjct: 244  GTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANRVKNIDKFAEYDFVITTYSTVEAE 303

Query: 1977 YRKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSK 1798
            YRKNVMPPKEKC WCGKSF  +K++VH +YFCGPDA+            GG   KPS+ K
Sbjct: 304  YRKNVMPPKEKCQWCGKSFYEQKLSVHQKYFCGPDAVKTAKQSKQQSKTGG---KPSKLK 360

Query: 1797 TKSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSS 1618
                +                                    G+     S+  A S +DS+
Sbjct: 361  KNPIEGDSEIDTGKRGR------------------------GKGIKRKSETDAGSVDDSA 396

Query: 1617 C------LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRV 1456
            C      +++SILHSV+WNRIILDEAH++KDRRSNT RA+LALESSYKWALSGTPLQNRV
Sbjct: 397  CAGQDMSMRKSILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQNRV 456

Query: 1455 GELYSLVRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQN 1276
            GELYSLVRFLQI PYSYYFC+DCDC+ LDYS +S+C +CPHK +RHFCWWN+YIA+PIQ+
Sbjct: 457  GELYSLVRFLQIVPYSYYFCKDCDCRVLDYS-SSECPHCPHKPIRHFCWWNRYIASPIQS 515

Query: 1275 SSSSYEGRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESI 1096
              +   GR AM+LLKHK+LKSI+LRRTKKGRA+DLALPPRIVT+R+D+LDVKEEDYY S+
Sbjct: 516  QGNHGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSL 575

Query: 1095 YNDSQLQFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG-- 922
            YN+SQ QFNTYI+AG LM+NYAHIFDLLTRLRQAVDHPYLV+YS    ++ +S    G  
Sbjct: 576  YNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARRESTNDAGSV 635

Query: 921  EHECGICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQ 742
            E  CG+CHDP E PVVTSC H FCK+CL D++A++GQVSCPSC KPLTVDF+     + Q
Sbjct: 636  EQPCGLCHDPVEDPVVTSCTHVFCKSCLIDFSASVGQVSCPSCSKPLTVDFTANDKGD-Q 694

Query: 741  GTKTNIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDL 562
             +K  IKG+R  SILNRI L +FQTSTKI+ALREEIRFM+ERDGSAK IVFSQFTSFLDL
Sbjct: 695  KSKATIKGFRSSSILNRIHLDDFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDL 754

Query: 561  IHYSLQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVF 382
            IHYSLQKSG+ CVQL GSM+MTARD+AI++FT+DPDCRIFLMSLKAGGVALNLTVAS VF
Sbjct: 755  IHYSLQKSGVSCVQLDGSMSMTARDSAIRRFTEDPDCRIFLMSLKAGGVALNLTVASQVF 814

Query: 381  LMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGS 202
            LMDPWWNPAVERQAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ KKELVFEGTVGGS
Sbjct: 815  LMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGS 874

Query: 201  SEALVKLTEADLRFLFST 148
            SEAL KLTEADL+FLF T
Sbjct: 875  SEALGKLTEADLKFLFVT 892


>ref|XP_011463401.1| PREDICTED: ATP-dependent helicase rhp16 isoform X2 [Fragaria vesca
            subsp. vesca]
          Length = 864

 Score =  985 bits (2547), Expect = 0.0
 Identities = 504/732 (68%), Positives = 572/732 (78%), Gaps = 6/732 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPS----EIN 2158
            L+QEES TRGGILADEMGMGKTIQAIALVL KR I   +      EP   +PS     I 
Sbjct: 165  LRQEESQTRGGILADEMGMGKTIQAIALVLAKREINWTLN-----EP---QPSTGLRHIK 216

Query: 2157 CTLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAE 1978
             TLV+CPVVAV QW +E+ RFT++GST++LVYHGANR+KS  QF DYDFV+TTYSIVEA+
Sbjct: 217  GTLVVCPVVAVSQWVSEIERFTSKGSTKILVYHGANREKSSKQFLDYDFVITTYSIVEAD 276

Query: 1977 YRKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSK 1798
            YRK+VMPPKEKC +CGK F   KM VHL+YFCGP+AI               +    Q K
Sbjct: 277  YRKHVMPPKEKCPYCGKLFYETKMTVHLKYFCGPNAIRTE------------KQSKQQRK 324

Query: 1797 TKSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSS 1618
            T                                 K     + +VA + +KG         
Sbjct: 325  THLPSKKTLESSNEKISGSSGTKKGAHKRKSKLHKDDDMDSEDVALNMNKG--------- 375

Query: 1617 CLKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSL 1438
                S+LH+V+WNRIILDEAH+IK RR NTA+AVLALES+YKWALSGTPLQNRVGELYSL
Sbjct: 376  ---NSVLHAVKWNRIILDEAHYIKSRRCNTAKAVLALESTYKWALSGTPLQNRVGELYSL 432

Query: 1437 VRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYE 1258
            VRFLQ+ PYSYY C+DCDC++LD+S TSQCSNCPH SVRHFCWWNK +ATPIQ   ++Y 
Sbjct: 433  VRFLQLVPYSYYLCKDCDCRTLDHSSTSQCSNCPHSSVRHFCWWNKNVATPIQLFGNTYS 492

Query: 1257 GRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQL 1078
            G+RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRIV++R+DTLD+KE+DYYES+Y DSQ 
Sbjct: 493  GKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRKDTLDIKEQDYYESLYTDSQA 552

Query: 1077 QFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSK--SQSNTYNGEHECGI 904
             FNTY++AG LM+NYAHIFDLLTRLRQAVDHPYLV+YS     +  +++N  N E  CGI
Sbjct: 553  LFNTYVDAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSATAALRIENKANIDNSEKICGI 612

Query: 903  CHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTNI 724
            CHDPAE  VVT+CEH FCKACL D++A+LGQVSCPSC K LTVD +T V    Q TKT I
Sbjct: 613  CHDPAEDQVVTACEHVFCKACLIDFSASLGQVSCPSCSKLLTVDLTTSVGAGNQTTKTTI 672

Query: 723  KGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ 544
            KG+R  SILNRI L  FQTSTKI+AL+EEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ
Sbjct: 673  KGFRSSSILNRIQLENFQTSTKIEALKEEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ 732

Query: 543  KSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 364
            KSG+ CVQLVGSMTM+ARD AIKKFT+DPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW
Sbjct: 733  KSGVNCVQLVGSMTMSARDNAIKKFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 792

Query: 363  NPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALVK 184
            NPAVERQAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ KKELVFEGT+GGSSEAL K
Sbjct: 793  NPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTIGGSSEALGK 852

Query: 183  LTEADLRFLFST 148
            LTEADL+FLF T
Sbjct: 853  LTEADLKFLFVT 864


>ref|XP_011463393.1| PREDICTED: ATP-dependent helicase rhp16 isoform X1 [Fragaria vesca
            subsp. vesca]
          Length = 905

 Score =  985 bits (2547), Expect = 0.0
 Identities = 504/732 (68%), Positives = 572/732 (78%), Gaps = 6/732 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPS----EIN 2158
            L+QEES TRGGILADEMGMGKTIQAIALVL KR I   +      EP   +PS     I 
Sbjct: 206  LRQEESQTRGGILADEMGMGKTIQAIALVLAKREINWTLN-----EP---QPSTGLRHIK 257

Query: 2157 CTLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAE 1978
             TLV+CPVVAV QW +E+ RFT++GST++LVYHGANR+KS  QF DYDFV+TTYSIVEA+
Sbjct: 258  GTLVVCPVVAVSQWVSEIERFTSKGSTKILVYHGANREKSSKQFLDYDFVITTYSIVEAD 317

Query: 1977 YRKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSK 1798
            YRK+VMPPKEKC +CGK F   KM VHL+YFCGP+AI               +    Q K
Sbjct: 318  YRKHVMPPKEKCPYCGKLFYETKMTVHLKYFCGPNAIRTE------------KQSKQQRK 365

Query: 1797 TKSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSS 1618
            T                                 K     + +VA + +KG         
Sbjct: 366  THLPSKKTLESSNEKISGSSGTKKGAHKRKSKLHKDDDMDSEDVALNMNKG--------- 416

Query: 1617 CLKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSL 1438
                S+LH+V+WNRIILDEAH+IK RR NTA+AVLALES+YKWALSGTPLQNRVGELYSL
Sbjct: 417  ---NSVLHAVKWNRIILDEAHYIKSRRCNTAKAVLALESTYKWALSGTPLQNRVGELYSL 473

Query: 1437 VRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYE 1258
            VRFLQ+ PYSYY C+DCDC++LD+S TSQCSNCPH SVRHFCWWNK +ATPIQ   ++Y 
Sbjct: 474  VRFLQLVPYSYYLCKDCDCRTLDHSSTSQCSNCPHSSVRHFCWWNKNVATPIQLFGNTYS 533

Query: 1257 GRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQL 1078
            G+RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRIV++R+DTLD+KE+DYYES+Y DSQ 
Sbjct: 534  GKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRKDTLDIKEQDYYESLYTDSQA 593

Query: 1077 QFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSK--SQSNTYNGEHECGI 904
             FNTY++AG LM+NYAHIFDLLTRLRQAVDHPYLV+YS     +  +++N  N E  CGI
Sbjct: 594  LFNTYVDAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSATAALRIENKANIDNSEKICGI 653

Query: 903  CHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTNI 724
            CHDPAE  VVT+CEH FCKACL D++A+LGQVSCPSC K LTVD +T V    Q TKT I
Sbjct: 654  CHDPAEDQVVTACEHVFCKACLIDFSASLGQVSCPSCSKLLTVDLTTSVGAGNQTTKTTI 713

Query: 723  KGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ 544
            KG+R  SILNRI L  FQTSTKI+AL+EEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ
Sbjct: 714  KGFRSSSILNRIQLENFQTSTKIEALKEEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ 773

Query: 543  KSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 364
            KSG+ CVQLVGSMTM+ARD AIKKFT+DPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW
Sbjct: 774  KSGVNCVQLVGSMTMSARDNAIKKFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 833

Query: 363  NPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALVK 184
            NPAVERQAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ KKELVFEGT+GGSSEAL K
Sbjct: 834  NPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTIGGSSEALGK 893

Query: 183  LTEADLRFLFST 148
            LTEADL+FLF T
Sbjct: 894  LTEADLKFLFVT 905


>ref|XP_009627930.1| PREDICTED: DNA repair protein RAD16 [Nicotiana tomentosiformis]
          Length = 916

 Score =  982 bits (2539), Expect = 0.0
 Identities = 497/734 (67%), Positives = 576/734 (78%), Gaps = 8/734 (1%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPSE----IN 2158
            LKQEES  RGG+LADEMGMGKT+QAIALVL KR + + I  + +  PS    S+    + 
Sbjct: 199  LKQEESTARGGVLADEMGMGKTVQAIALVLAKRELGQAISESSL-PPSAPCTSQELPAVK 257

Query: 2157 CTLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAE 1978
             TLVICPVVAV+QW +E+ RFT +GS ++LVYHGANR+K++ +F++YDFV+TTYS VEAE
Sbjct: 258  GTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANREKNIHKFAEYDFVITTYSTVEAE 317

Query: 1977 YRKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPS--Q 1804
            YRKNVMPPKEKC WCGKSF  +K++VH RYFCGPDA+               +LKP    
Sbjct: 318  YRKNVMPPKEKCQWCGKSFYEQKLSVHQRYFCGPDAVRTAKQSKQERK----KLKPGGKM 373

Query: 1803 SKTKSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNED 1624
            SK K E +                               G +      + S   A   + 
Sbjct: 374  SKLKKESIKGKAKTDSDSEIETGSKRGRGK---------GVKRKIKTDAGSIDDATGVDQ 424

Query: 1623 SSCLKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELY 1444
                ++SILHSV+WNRIILDEAH++KDRR NTARA+ ALESSYKWALSGTPLQNRVGELY
Sbjct: 425  DMITRKSILHSVKWNRIILDEAHYVKDRRCNTARAIFALESSYKWALSGTPLQNRVGELY 484

Query: 1443 SLVRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSS 1264
            SLVRFLQ+ PYSYYFC+DCDC+ LDYS T  C +CPHKSVRHFCWWNKYIA+PIQ+  + 
Sbjct: 485  SLVRFLQMIPYSYYFCKDCDCRVLDYSSTD-CPHCPHKSVRHFCWWNKYIASPIQSQGNR 543

Query: 1263 YEGRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDS 1084
              GR AM+LLKHK+LKSI+LRRTKKGRA+DLALPPRIVT+R+D+LDVKEEDYY S+YN+S
Sbjct: 544  GTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNES 603

Query: 1083 QLQFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG--EHEC 910
            Q QFNTYI+AG LM+NYAHIFDLLTRLRQAVDHPYLV+YS    ++S +   +G  E  C
Sbjct: 604  QAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARSGNTDDSGYAEQPC 663

Query: 909  GICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKT 730
            G+CHDP E PVV SC H FCK+CL D++A++GQVSCPSC KPLTVDF+     + Q TK 
Sbjct: 664  GLCHDPVEDPVVASCTHVFCKSCLIDFSASVGQVSCPSCSKPLTVDFTANEKGD-QKTKP 722

Query: 729  NIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYS 550
            ++KG+R  SILNRI L +FQTSTKIDALREEIRFMVERDGSAK IVFSQFTSFLDLIHYS
Sbjct: 723  HVKGFRSSSILNRIRLNDFQTSTKIDALREEIRFMVERDGSAKAIVFSQFTSFLDLIHYS 782

Query: 549  LQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDP 370
            LQKSGI CVQLVGSM++TARD+AI +FT+DPDCRIFLMSLKAGGVALNLTVASHVFLMDP
Sbjct: 783  LQKSGISCVQLVGSMSITARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDP 842

Query: 369  WWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEAL 190
            WWNPAVE+QAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ KKELVFEGTVGGSSEAL
Sbjct: 843  WWNPAVEQQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEAL 902

Query: 189  VKLTEADLRFLFST 148
             KLTEADL+FLF T
Sbjct: 903  GKLTEADLKFLFVT 916


>ref|XP_004240150.1| PREDICTED: DNA repair protein RAD16-like [Solanum lycopersicum]
          Length = 889

 Score =  982 bits (2538), Expect = 0.0
 Identities = 496/731 (67%), Positives = 574/731 (78%), Gaps = 5/731 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPS---LERPSEINC 2155
            LKQEES  RGGILADEMGMGKT+QAIALVL KR I + I G+ +  P+    ++   +  
Sbjct: 182  LKQEESTARGGILADEMGMGKTVQAIALVLAKREIGQAISGSSLLSPAPCTSQQLPVMKG 241

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            +LVICPVVAV+QW +E+ RFT +GS ++LVYHG NR K++ +F++YDFV+TTYS VEAEY
Sbjct: 242  SLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGTNRVKNIDKFAEYDFVITTYSTVEAEY 301

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RKNVMPPKEKC WCGKSF  +K++VH +YFCGPDA+            GG   KPS  K 
Sbjct: 302  RKNVMPPKEKCQWCGKSFYEQKLSVHQKYFCGPDAVKTAKQSKQQSKPGG---KPS--KL 356

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            K + +                                 +  E  A     LA + +D S 
Sbjct: 357  KKDHIEGDSKINTGKRGSGKGIK---------------RKSEADAGCVDDLAFAGQDMST 401

Query: 1614 LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLV 1435
             K SILHSV+WNRIILDEAH++KDRRSNT RA+LALESSYKWALSGTPLQNRVGELYSLV
Sbjct: 402  RK-SILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQNRVGELYSLV 460

Query: 1434 RFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEG 1255
            RFLQI PYSYYFC+DCDC+ LDYS +S+C +CPHKS+RHFCWWN+YIA+PIQN  +   G
Sbjct: 461  RFLQIVPYSYYFCKDCDCRVLDYS-SSECPHCPHKSIRHFCWWNRYIASPIQNQGNRGTG 519

Query: 1254 RRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQ 1075
            R AM+LLKHK+LKSI+LRRTKKGRA+DLALPPRIVT+R+D+LDVKEEDYY S+YN+SQ Q
Sbjct: 520  RDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQ 579

Query: 1074 FNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNGEHE--CGIC 901
            FNTYI+AG LM+NYAHIFDLLTRLRQAVDHPYLV+YS    ++  S    G  E  CG+C
Sbjct: 580  FNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARRGSTNDAGSVEQLCGLC 639

Query: 900  HDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTNIK 721
            HDP E PVVTSC H FCK+CL D++A++GQVSCPSC +PLTVDF+     + Q +K  IK
Sbjct: 640  HDPVEDPVVTSCTHIFCKSCLIDFSASVGQVSCPSCSEPLTVDFTANDKGD-QKSKATIK 698

Query: 720  GYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQK 541
            G+R  SILNRI L  FQTSTKI+ALREEIRFM+E DGSAK IVFSQFTSFLDLIHYSLQK
Sbjct: 699  GFRSSSILNRIHLDNFQTSTKIEALREEIRFMIEIDGSAKAIVFSQFTSFLDLIHYSLQK 758

Query: 540  SGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWN 361
            SG+ CVQL GSM+MTARD+AI +FT+DPDCRIFLMSLKAGGVALNLTVAS VFLMDPWWN
Sbjct: 759  SGVSCVQLDGSMSMTARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASQVFLMDPWWN 818

Query: 360  PAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALVKL 181
            PAVERQAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ KKELVFEGTVGGSSEAL KL
Sbjct: 819  PAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGKL 878

Query: 180  TEADLRFLFST 148
            TEADL+FLF T
Sbjct: 879  TEADLKFLFVT 889


>ref|XP_009795276.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Nicotiana sylvestris]
          Length = 916

 Score =  979 bits (2532), Expect = 0.0
 Identities = 494/732 (67%), Positives = 572/732 (78%), Gaps = 6/732 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEP----SLERPSEIN 2158
            LKQEES  RGGILADEMGMGKT+QAIALVL KR + + I  + +       S E P+ + 
Sbjct: 199  LKQEESTARGGILADEMGMGKTVQAIALVLAKRELGQAISESSLLSSAPCTSQELPA-VK 257

Query: 2157 CTLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAE 1978
             TLVICPVVAV+QW +E+ RFT +GS ++LVYHGANR+K++ +F++YDFV+TTYS VEAE
Sbjct: 258  GTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANREKNIHKFAEYDFVITTYSTVEAE 317

Query: 1977 YRKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSK 1798
            YRKNVMPPKEKC WCGKSF  +K++VH RYFCGPDA+               +LK  + K
Sbjct: 318  YRKNVMPPKEKCQWCGKSFYEQKLSVHQRYFCGPDAVRTAK-----------QLKQERKK 366

Query: 1797 TKSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSS 1618
            +K                                +  G +      +SS   A   +   
Sbjct: 367  SKPGGKTSKLKKESIKGKAKTDSDSEIETGSKRGRGKGVKRKIKTDASSIDDAAGVDQDM 426

Query: 1617 CLKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSL 1438
              ++SILHSV+WNRIILDEAH++KDRR NT RA+ ALESSYKWALSGTPLQNRVGELYSL
Sbjct: 427  ITRKSILHSVKWNRIILDEAHYVKDRRCNTTRAIFALESSYKWALSGTPLQNRVGELYSL 486

Query: 1437 VRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYE 1258
            VRFLQ+ PYSYYFC+DCDC+ LDYS T  C +CPHKSVRHFCWWNKYIA+PIQ+  +   
Sbjct: 487  VRFLQMIPYSYYFCKDCDCRVLDYSPTD-CPHCPHKSVRHFCWWNKYIASPIQSQGNRGT 545

Query: 1257 GRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQL 1078
            GR AM+LLKHK+LKSI+LRRTKKGRA+DLALPPRIVT+R+D+LDVKEEDYY S+YN+SQ 
Sbjct: 546  GRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQA 605

Query: 1077 QFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG--EHECGI 904
            QFNTYI+AG LM+NYAHIFDLLTRLRQAVDHPYLV+YS    ++S +   +G  E  CG+
Sbjct: 606  QFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARSGNTDDSGYVEQPCGL 665

Query: 903  CHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTNI 724
            CHDP E PVV SC H FCK+CL D++A +GQVSCPSC KPL VDF+     + Q TK  +
Sbjct: 666  CHDPVEDPVVASCTHVFCKSCLIDFSATVGQVSCPSCSKPLAVDFTANDKGD-QKTKPTV 724

Query: 723  KGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ 544
            KG+R  SILNRI L +FQTSTKIDALREEIRFMVERDGSAK IVFSQFTSFLDLIHYSLQ
Sbjct: 725  KGFRSSSILNRIRLNDFQTSTKIDALREEIRFMVERDGSAKAIVFSQFTSFLDLIHYSLQ 784

Query: 543  KSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 364
            KSGI CVQLVGSM++TARD+AI +FT+DPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW
Sbjct: 785  KSGISCVQLVGSMSITARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 844

Query: 363  NPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALVK 184
            NPAVE+QAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ KKELVFEGTVGGSSEAL K
Sbjct: 845  NPAVEQQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGK 904

Query: 183  LTEADLRFLFST 148
            LTEADL+FLF T
Sbjct: 905  LTEADLKFLFVT 916


>ref|XP_009795273.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Nicotiana sylvestris]
            gi|698498778|ref|XP_009795275.1| PREDICTED: DNA repair
            protein RAD16 isoform X1 [Nicotiana sylvestris]
          Length = 926

 Score =  979 bits (2532), Expect = 0.0
 Identities = 494/732 (67%), Positives = 572/732 (78%), Gaps = 6/732 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEP----SLERPSEIN 2158
            LKQEES  RGGILADEMGMGKT+QAIALVL KR + + I  + +       S E P+ + 
Sbjct: 209  LKQEESTARGGILADEMGMGKTVQAIALVLAKRELGQAISESSLLSSAPCTSQELPA-VK 267

Query: 2157 CTLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAE 1978
             TLVICPVVAV+QW +E+ RFT +GS ++LVYHGANR+K++ +F++YDFV+TTYS VEAE
Sbjct: 268  GTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANREKNIHKFAEYDFVITTYSTVEAE 327

Query: 1977 YRKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSK 1798
            YRKNVMPPKEKC WCGKSF  +K++VH RYFCGPDA+               +LK  + K
Sbjct: 328  YRKNVMPPKEKCQWCGKSFYEQKLSVHQRYFCGPDAVRTAK-----------QLKQERKK 376

Query: 1797 TKSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSS 1618
            +K                                +  G +      +SS   A   +   
Sbjct: 377  SKPGGKTSKLKKESIKGKAKTDSDSEIETGSKRGRGKGVKRKIKTDASSIDDAAGVDQDM 436

Query: 1617 CLKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSL 1438
              ++SILHSV+WNRIILDEAH++KDRR NT RA+ ALESSYKWALSGTPLQNRVGELYSL
Sbjct: 437  ITRKSILHSVKWNRIILDEAHYVKDRRCNTTRAIFALESSYKWALSGTPLQNRVGELYSL 496

Query: 1437 VRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYE 1258
            VRFLQ+ PYSYYFC+DCDC+ LDYS T  C +CPHKSVRHFCWWNKYIA+PIQ+  +   
Sbjct: 497  VRFLQMIPYSYYFCKDCDCRVLDYSPTD-CPHCPHKSVRHFCWWNKYIASPIQSQGNRGT 555

Query: 1257 GRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQL 1078
            GR AM+LLKHK+LKSI+LRRTKKGRA+DLALPPRIVT+R+D+LDVKEEDYY S+YN+SQ 
Sbjct: 556  GRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQA 615

Query: 1077 QFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG--EHECGI 904
            QFNTYI+AG LM+NYAHIFDLLTRLRQAVDHPYLV+YS    ++S +   +G  E  CG+
Sbjct: 616  QFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARSGNTDDSGYVEQPCGL 675

Query: 903  CHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTNI 724
            CHDP E PVV SC H FCK+CL D++A +GQVSCPSC KPL VDF+     + Q TK  +
Sbjct: 676  CHDPVEDPVVASCTHVFCKSCLIDFSATVGQVSCPSCSKPLAVDFTANDKGD-QKTKPTV 734

Query: 723  KGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ 544
            KG+R  SILNRI L +FQTSTKIDALREEIRFMVERDGSAK IVFSQFTSFLDLIHYSLQ
Sbjct: 735  KGFRSSSILNRIRLNDFQTSTKIDALREEIRFMVERDGSAKAIVFSQFTSFLDLIHYSLQ 794

Query: 543  KSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 364
            KSGI CVQLVGSM++TARD+AI +FT+DPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW
Sbjct: 795  KSGISCVQLVGSMSITARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 854

Query: 363  NPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALVK 184
            NPAVE+QAQDRIHRIGQYKPIRI RF+IENTIEERILKLQ KKELVFEGTVGGSSEAL K
Sbjct: 855  NPAVEQQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGK 914

Query: 183  LTEADLRFLFST 148
            LTEADL+FLF T
Sbjct: 915  LTEADLKFLFVT 926


>ref|XP_002320469.2| hypothetical protein POPTR_0014s15270g [Populus trichocarpa]
            gi|550324256|gb|EEE98784.2| hypothetical protein
            POPTR_0014s15270g [Populus trichocarpa]
          Length = 869

 Score =  977 bits (2525), Expect = 0.0
 Identities = 494/743 (66%), Positives = 571/743 (76%), Gaps = 17/743 (2%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGI---GGADVCEPSLERPSEINC 2155
            L+QEES TRGGILADEMGMGKTIQAIALVL KR + + +    G      S    + I  
Sbjct: 179  LEQEESSTRGGILADEMGMGKTIQAIALVLAKRELHQNLFEFNGPSPFSGSSSDLAGIKA 238

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLV+CPVVAV QW NE+ R+T +GST+VLVYHGANR+KS   F DYDFV+TTYSI+E+E+
Sbjct: 239  TLVVCPVVAVTQWVNEIDRYTTKGSTKVLVYHGANREKSSKLFHDYDFVITTYSIIESEF 298

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPK+KCV+CG SF  KK+ VHL+YFCGPDA                  +  Q+K 
Sbjct: 299  RKYMMPPKKKCVYCGNSFYEKKLTVHLKYFCGPDANRTAK-------------QSKQAKK 345

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            K + V                                        S+SK   ES++D SC
Sbjct: 346  KQKTVP---------------------------------------SASKQKTESDKDKSC 366

Query: 1614 ------------LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTP 1471
                         ++S+LHS++W RIILDEAHFIKDRR NTA+AV AL+SSYKWALSGTP
Sbjct: 367  PMELSEVELGLQKEKSLLHSLKWERIILDEAHFIKDRRCNTAKAVFALDSSYKWALSGTP 426

Query: 1470 LQNRVGELYSLVRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIA 1291
            LQNRVGELYSLVRFLQI PYSYY C+DCDC++LDY  ++QCS+CPH SVRHFCWWNKY++
Sbjct: 427  LQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYGSSTQCSSCPHSSVRHFCWWNKYVS 486

Query: 1290 TPIQNSSSSYEGRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEED 1111
             PIQ   ++  GRRAMILLKHK+LK+IVLRRTKKGRASDLALPPRIV +RRD LDV+EED
Sbjct: 487  NPIQKHGNADYGRRAMILLKHKVLKNIVLRRTKKGRASDLALPPRIVILRRDILDVREED 546

Query: 1110 YYESIYNDSQLQFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQS-- 937
            YYES+YN+SQ QFNTY+EAG LM+NYAHIFDLLTRLRQAVDHPYLV+YSK    K  +  
Sbjct: 547  YYESLYNESQAQFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTSALKGGNMV 606

Query: 936  NTYNGEHECGICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKV 757
            +  + ++ CGICH+PAE PVVTSC H FCK CL D++A+ G+VSCP C K LTVDF+  V
Sbjct: 607  DLDSAKNACGICHEPAEDPVVTSCAHGFCKTCLLDFSASFGEVSCPVCSKSLTVDFTGNV 666

Query: 756  NPEAQGTKTNIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFT 577
            +   Q  KT IKG+R GSILNR+ L +FQTSTKI+ALREEIRFM ERDGSAKGIVFSQFT
Sbjct: 667  DAGDQTAKTTIKGFRSGSILNRVQLDDFQTSTKIEALREEIRFMAERDGSAKGIVFSQFT 726

Query: 576  SFLDLIHYSLQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTV 397
            SFLDLIHYSLQKSGI CVQLVGSM++ ARDAAIK+F +DPDC+IFLMSLKAGGVALNLTV
Sbjct: 727  SFLDLIHYSLQKSGISCVQLVGSMSLAARDAAIKRFAEDPDCKIFLMSLKAGGVALNLTV 786

Query: 396  ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEG 217
            ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRI RF+IENT+EERIL+LQ KKELVFEG
Sbjct: 787  ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTVEERILQLQEKKELVFEG 846

Query: 216  TVGGSSEALVKLTEADLRFLFST 148
            TVGGSSEAL KLTEADLRFLF+T
Sbjct: 847  TVGGSSEALGKLTEADLRFLFAT 869


>ref|XP_007046386.1| Helicase protein with RING/U-box domain isoform 2 [Theobroma cacao]
            gi|590701383|ref|XP_007046388.1| Helicase protein with
            RING/U-box domain isoform 2 [Theobroma cacao]
            gi|508710321|gb|EOY02218.1| Helicase protein with
            RING/U-box domain isoform 2 [Theobroma cacao]
            gi|508710323|gb|EOY02220.1| Helicase protein with
            RING/U-box domain isoform 2 [Theobroma cacao]
          Length = 836

 Score =  976 bits (2523), Expect = 0.0
 Identities = 493/733 (67%), Positives = 570/733 (77%), Gaps = 7/733 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIG---GADVCEPSLERPSEINC 2155
            LKQE+S T+GGILADEMGMGKTIQAIALVL KR + R I    G+ +   S      I  
Sbjct: 123  LKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRG 182

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLVICPVVAV QW +E+ RFT+ GST+VLVYHG NR K++ QF DYDFV+TTYSIVEAEY
Sbjct: 183  TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEY 242

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPKEKC +CGKSF  KK++VHL+Y+CGPDA+               E K S+S  
Sbjct: 243  RKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQ-------ERKKSKSVF 295

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            KS++                                 F+  +  A     L +       
Sbjct: 296  KSDREHTSNYETDMRKGAGKKKSKHNEEDKDLD----FEFDDTFAGVEHSLPQG------ 345

Query: 1614 LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLV 1435
              +S+LHSV+W RIILDEAHF+KDRR NTA+AVL LES YKWALSGTPLQNRVGELYSLV
Sbjct: 346  --KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLV 403

Query: 1434 RFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEG 1255
            RFLQI PYSYY C+DCDC++LDYS ++QCSNCPH SVRHFCWWNKY+ATPIQ   +   G
Sbjct: 404  RFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIG 463

Query: 1254 RRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQ 1075
            +RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRIV++RRDT+D+KE DYYES+Y++SQ Q
Sbjct: 464  KRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQ 523

Query: 1074 FNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYS----KNGGSKSQSNTYNGEHECG 907
            FNTY++AG +M+NYAHIFDLLTRLRQAVDHPYLV+YS    +  GS   S+  N E  CG
Sbjct: 524  FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCG 583

Query: 906  ICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTN 727
            ICHDP E PVVT+C H FCKACL D++A+LGQVSCPSC + LTVD +TK +   Q ++T 
Sbjct: 584  ICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTT 643

Query: 726  IKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSL 547
            +KG++  SILNRI L +FQTSTKI+ALREEI  MVERDGSAKGIVFSQFTSFLDLI+YSL
Sbjct: 644  LKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSL 703

Query: 546  QKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPW 367
             KSGI CVQLVGSM+M ARDAAIK+FT+DPDC+IFLMSLKAGGVALNLTVASHVFLMDPW
Sbjct: 704  HKSGINCVQLVGSMSMAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPW 763

Query: 366  WNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALV 187
            WNPAVERQAQDRIHRIGQ KPIRI RF+IENTIEERILKLQ KKELVFEGTVGGS+EAL 
Sbjct: 764  WNPAVERQAQDRIHRIGQCKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALG 823

Query: 186  KLTEADLRFLFST 148
            KLTEAD+RFLF T
Sbjct: 824  KLTEADMRFLFVT 836


>ref|XP_007046385.1| Helicase protein with RING/U-box domain isoform 1 [Theobroma cacao]
            gi|508710320|gb|EOY02217.1| Helicase protein with
            RING/U-box domain isoform 1 [Theobroma cacao]
          Length = 896

 Score =  976 bits (2523), Expect = 0.0
 Identities = 493/733 (67%), Positives = 570/733 (77%), Gaps = 7/733 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIG---GADVCEPSLERPSEINC 2155
            LKQE+S T+GGILADEMGMGKTIQAIALVL KR + R I    G+ +   S      I  
Sbjct: 183  LKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRG 242

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLVICPVVAV QW +E+ RFT+ GST+VLVYHG NR K++ QF DYDFV+TTYSIVEAEY
Sbjct: 243  TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEY 302

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPKEKC +CGKSF  KK++VHL+Y+CGPDA+               E K S+S  
Sbjct: 303  RKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQ-------ERKKSKSVF 355

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            KS++                                 F+  +  A     L +       
Sbjct: 356  KSDREHTSNYETDMRKGAGKKKSKHNEEDKDLD----FEFDDTFAGVEHSLPQG------ 405

Query: 1614 LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLV 1435
              +S+LHSV+W RIILDEAHF+KDRR NTA+AVL LES YKWALSGTPLQNRVGELYSLV
Sbjct: 406  --KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLV 463

Query: 1434 RFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEG 1255
            RFLQI PYSYY C+DCDC++LDYS ++QCSNCPH SVRHFCWWNKY+ATPIQ   +   G
Sbjct: 464  RFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIG 523

Query: 1254 RRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQ 1075
            +RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRIV++RRDT+D+KE DYYES+Y++SQ Q
Sbjct: 524  KRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQ 583

Query: 1074 FNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYS----KNGGSKSQSNTYNGEHECG 907
            FNTY++AG +M+NYAHIFDLLTRLRQAVDHPYLV+YS    +  GS   S+  N E  CG
Sbjct: 584  FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCG 643

Query: 906  ICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTN 727
            ICHDP E PVVT+C H FCKACL D++A+LGQVSCPSC + LTVD +TK +   Q ++T 
Sbjct: 644  ICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTT 703

Query: 726  IKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSL 547
            +KG++  SILNRI L +FQTSTKI+ALREEI  MVERDGSAKGIVFSQFTSFLDLI+YSL
Sbjct: 704  LKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSL 763

Query: 546  QKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPW 367
             KSGI CVQLVGSM+M ARDAAIK+FT+DPDC+IFLMSLKAGGVALNLTVASHVFLMDPW
Sbjct: 764  HKSGINCVQLVGSMSMAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPW 823

Query: 366  WNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALV 187
            WNPAVERQAQDRIHRIGQ KPIRI RF+IENTIEERILKLQ KKELVFEGTVGGS+EAL 
Sbjct: 824  WNPAVERQAQDRIHRIGQCKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALG 883

Query: 186  KLTEADLRFLFST 148
            KLTEAD+RFLF T
Sbjct: 884  KLTEADMRFLFVT 896


>gb|KJB30319.1| hypothetical protein B456_005G137100 [Gossypium raimondii]
          Length = 767

 Score =  971 bits (2510), Expect = 0.0
 Identities = 491/732 (67%), Positives = 571/732 (78%), Gaps = 8/732 (1%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPSE---INC 2155
            LKQE+S T+GGILADEMGMGKTIQAIALVL KR +   IG  +V   +    ++   I C
Sbjct: 56   LKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRC 115

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLVICPVVAV QW +E+ RFT+ GST+VLVYHGANR K+V QFS+YDFV+TTYSIVEAEY
Sbjct: 116  TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEY 175

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPKEKC +CGKSF  KK++VHL+Y+CGPDAI               + K  + K 
Sbjct: 176  RKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTEN-----------QSKQERKKP 224

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            KS                               K   F+  E +A     L E       
Sbjct: 225  KSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEG------ 278

Query: 1614 LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLV 1435
              +S+LHSV+W RIILDEAHF+KDRR NTA+AVL+LES YKWALSGTPLQNRVGELYSLV
Sbjct: 279  --KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLV 336

Query: 1434 RFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEG 1255
            RFLQI PYSYY C+DCDC++LDYS ++QC NCPH SVRHFCWWNKY+ATPIQ+  +   G
Sbjct: 337  RFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIG 396

Query: 1254 RRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQ 1075
            +RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRI+++RRDT+D+KE DYYES+Y++SQ Q
Sbjct: 397  KRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQ 456

Query: 1074 FNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG-----EHEC 910
            FNTY++AG +M+NYAHIFDLLTRLRQAVDHPYLV+YS     ++  N  NG     E  C
Sbjct: 457  FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRA-GNMVNGDRNDDEQVC 515

Query: 909  GICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKT 730
            GIC+DPAE PVVT+C H FCKACL D++A+LG VSCPSC + LTVD +T  +   Q +KT
Sbjct: 516  GICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKT 574

Query: 729  NIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYS 550
             +KG++  SILNRI L +FQTSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLD+I YS
Sbjct: 575  TLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYS 634

Query: 549  LQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDP 370
            L KS I+CVQLVGSM++ ARDAAIK FT+DPDC+IFLMSLKAGGVALNLTVASHVFLMDP
Sbjct: 635  LHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 694

Query: 369  WWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEAL 190
            WWNPAVERQAQDRIHRIGQ KPIRI RF+IENTIEERILKLQ KKELVFEGTVGGS+EAL
Sbjct: 695  WWNPAVERQAQDRIHRIGQCKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEAL 754

Query: 189  VKLTEADLRFLF 154
             KLTEAD+RFLF
Sbjct: 755  GKLTEADMRFLF 766


>gb|KJB30318.1| hypothetical protein B456_005G137100 [Gossypium raimondii]
          Length = 840

 Score =  971 bits (2510), Expect = 0.0
 Identities = 491/732 (67%), Positives = 571/732 (78%), Gaps = 8/732 (1%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPSE---INC 2155
            LKQE+S T+GGILADEMGMGKTIQAIALVL KR +   IG  +V   +    ++   I C
Sbjct: 129  LKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRC 188

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLVICPVVAV QW +E+ RFT+ GST+VLVYHGANR K+V QFS+YDFV+TTYSIVEAEY
Sbjct: 189  TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEY 248

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPKEKC +CGKSF  KK++VHL+Y+CGPDAI               + K  + K 
Sbjct: 249  RKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTEN-----------QSKQERKKP 297

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            KS                               K   F+  E +A     L E       
Sbjct: 298  KSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEG------ 351

Query: 1614 LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLV 1435
              +S+LHSV+W RIILDEAHF+KDRR NTA+AVL+LES YKWALSGTPLQNRVGELYSLV
Sbjct: 352  --KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLV 409

Query: 1434 RFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEG 1255
            RFLQI PYSYY C+DCDC++LDYS ++QC NCPH SVRHFCWWNKY+ATPIQ+  +   G
Sbjct: 410  RFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIG 469

Query: 1254 RRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQ 1075
            +RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRI+++RRDT+D+KE DYYES+Y++SQ Q
Sbjct: 470  KRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQ 529

Query: 1074 FNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG-----EHEC 910
            FNTY++AG +M+NYAHIFDLLTRLRQAVDHPYLV+YS     ++  N  NG     E  C
Sbjct: 530  FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRA-GNMVNGDRNDDEQVC 588

Query: 909  GICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKT 730
            GIC+DPAE PVVT+C H FCKACL D++A+LG VSCPSC + LTVD +T  +   Q +KT
Sbjct: 589  GICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKT 647

Query: 729  NIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYS 550
             +KG++  SILNRI L +FQTSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLD+I YS
Sbjct: 648  TLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYS 707

Query: 549  LQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDP 370
            L KS I+CVQLVGSM++ ARDAAIK FT+DPDC+IFLMSLKAGGVALNLTVASHVFLMDP
Sbjct: 708  LHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 767

Query: 369  WWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEAL 190
            WWNPAVERQAQDRIHRIGQ KPIRI RF+IENTIEERILKLQ KKELVFEGTVGGS+EAL
Sbjct: 768  WWNPAVERQAQDRIHRIGQCKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEAL 827

Query: 189  VKLTEADLRFLF 154
             KLTEAD+RFLF
Sbjct: 828  GKLTEADMRFLF 839


>gb|KJB30317.1| hypothetical protein B456_005G137100 [Gossypium raimondii]
          Length = 926

 Score =  971 bits (2510), Expect = 0.0
 Identities = 491/732 (67%), Positives = 571/732 (78%), Gaps = 8/732 (1%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPSE---INC 2155
            LKQE+S T+GGILADEMGMGKTIQAIALVL KR +   IG  +V   +    ++   I C
Sbjct: 215  LKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRC 274

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLVICPVVAV QW +E+ RFT+ GST+VLVYHGANR K+V QFS+YDFV+TTYSIVEAEY
Sbjct: 275  TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEY 334

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPKEKC +CGKSF  KK++VHL+Y+CGPDAI               + K  + K 
Sbjct: 335  RKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTEN-----------QSKQERKKP 383

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            KS                               K   F+  E +A     L E       
Sbjct: 384  KSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEG------ 437

Query: 1614 LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLV 1435
              +S+LHSV+W RIILDEAHF+KDRR NTA+AVL+LES YKWALSGTPLQNRVGELYSLV
Sbjct: 438  --KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLV 495

Query: 1434 RFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEG 1255
            RFLQI PYSYY C+DCDC++LDYS ++QC NCPH SVRHFCWWNKY+ATPIQ+  +   G
Sbjct: 496  RFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIG 555

Query: 1254 RRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQ 1075
            +RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRI+++RRDT+D+KE DYYES+Y++SQ Q
Sbjct: 556  KRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQ 615

Query: 1074 FNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG-----EHEC 910
            FNTY++AG +M+NYAHIFDLLTRLRQAVDHPYLV+YS     ++  N  NG     E  C
Sbjct: 616  FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRA-GNMVNGDRNDDEQVC 674

Query: 909  GICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKT 730
            GIC+DPAE PVVT+C H FCKACL D++A+LG VSCPSC + LTVD +T  +   Q +KT
Sbjct: 675  GICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKT 733

Query: 729  NIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYS 550
             +KG++  SILNRI L +FQTSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLD+I YS
Sbjct: 734  TLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYS 793

Query: 549  LQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDP 370
            L KS I+CVQLVGSM++ ARDAAIK FT+DPDC+IFLMSLKAGGVALNLTVASHVFLMDP
Sbjct: 794  LHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 853

Query: 369  WWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEAL 190
            WWNPAVERQAQDRIHRIGQ KPIRI RF+IENTIEERILKLQ KKELVFEGTVGGS+EAL
Sbjct: 854  WWNPAVERQAQDRIHRIGQCKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEAL 913

Query: 189  VKLTEADLRFLF 154
             KLTEAD+RFLF
Sbjct: 914  GKLTEADMRFLF 925


>ref|XP_012478613.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Gossypium raimondii]
            gi|763763062|gb|KJB30316.1| hypothetical protein
            B456_005G137100 [Gossypium raimondii]
          Length = 884

 Score =  971 bits (2510), Expect = 0.0
 Identities = 491/732 (67%), Positives = 571/732 (78%), Gaps = 8/732 (1%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPSE---INC 2155
            LKQE+S T+GGILADEMGMGKTIQAIALVL KR +   IG  +V   +    ++   I C
Sbjct: 173  LKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRC 232

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLVICPVVAV QW +E+ RFT+ GST+VLVYHGANR K+V QFS+YDFV+TTYSIVEAEY
Sbjct: 233  TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEY 292

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPKEKC +CGKSF  KK++VHL+Y+CGPDAI               + K  + K 
Sbjct: 293  RKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTEN-----------QSKQERKKP 341

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            KS                               K   F+  E +A     L E       
Sbjct: 342  KSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEG------ 395

Query: 1614 LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLV 1435
              +S+LHSV+W RIILDEAHF+KDRR NTA+AVL+LES YKWALSGTPLQNRVGELYSLV
Sbjct: 396  --KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLV 453

Query: 1434 RFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEG 1255
            RFLQI PYSYY C+DCDC++LDYS ++QC NCPH SVRHFCWWNKY+ATPIQ+  +   G
Sbjct: 454  RFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIG 513

Query: 1254 RRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQ 1075
            +RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRI+++RRDT+D+KE DYYES+Y++SQ Q
Sbjct: 514  KRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQ 573

Query: 1074 FNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG-----EHEC 910
            FNTY++AG +M+NYAHIFDLLTRLRQAVDHPYLV+YS     ++  N  NG     E  C
Sbjct: 574  FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRA-GNMVNGDRNDDEQVC 632

Query: 909  GICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKT 730
            GIC+DPAE PVVT+C H FCKACL D++A+LG VSCPSC + LTVD +T  +   Q +KT
Sbjct: 633  GICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKT 691

Query: 729  NIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYS 550
             +KG++  SILNRI L +FQTSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLD+I YS
Sbjct: 692  TLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYS 751

Query: 549  LQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDP 370
            L KS I+CVQLVGSM++ ARDAAIK FT+DPDC+IFLMSLKAGGVALNLTVASHVFLMDP
Sbjct: 752  LHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 811

Query: 369  WWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEAL 190
            WWNPAVERQAQDRIHRIGQ KPIRI RF+IENTIEERILKLQ KKELVFEGTVGGS+EAL
Sbjct: 812  WWNPAVERQAQDRIHRIGQCKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEAL 871

Query: 189  VKLTEADLRFLF 154
             KLTEAD+RFLF
Sbjct: 872  GKLTEADMRFLF 883


>ref|XP_012478612.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Gossypium raimondii]
            gi|763763058|gb|KJB30312.1| hypothetical protein
            B456_005G137100 [Gossypium raimondii]
          Length = 885

 Score =  971 bits (2510), Expect = 0.0
 Identities = 491/732 (67%), Positives = 571/732 (78%), Gaps = 8/732 (1%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPSE---INC 2155
            LKQE+S T+GGILADEMGMGKTIQAIALVL KR +   IG  +V   +    ++   I C
Sbjct: 174  LKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRC 233

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLVICPVVAV QW +E+ RFT+ GST+VLVYHGANR K+V QFS+YDFV+TTYSIVEAEY
Sbjct: 234  TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEY 293

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPKEKC +CGKSF  KK++VHL+Y+CGPDAI               + K  + K 
Sbjct: 294  RKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTEN-----------QSKQERKKP 342

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            KS                               K   F+  E +A     L E       
Sbjct: 343  KSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEG------ 396

Query: 1614 LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLV 1435
              +S+LHSV+W RIILDEAHF+KDRR NTA+AVL+LES YKWALSGTPLQNRVGELYSLV
Sbjct: 397  --KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLV 454

Query: 1434 RFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEG 1255
            RFLQI PYSYY C+DCDC++LDYS ++QC NCPH SVRHFCWWNKY+ATPIQ+  +   G
Sbjct: 455  RFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIG 514

Query: 1254 RRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQ 1075
            +RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRI+++RRDT+D+KE DYYES+Y++SQ Q
Sbjct: 515  KRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQ 574

Query: 1074 FNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG-----EHEC 910
            FNTY++AG +M+NYAHIFDLLTRLRQAVDHPYLV+YS     ++  N  NG     E  C
Sbjct: 575  FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRA-GNMVNGDRNDDEQVC 633

Query: 909  GICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKT 730
            GIC+DPAE PVVT+C H FCKACL D++A+LG VSCPSC + LTVD +T  +   Q +KT
Sbjct: 634  GICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKT 692

Query: 729  NIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYS 550
             +KG++  SILNRI L +FQTSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLD+I YS
Sbjct: 693  TLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYS 752

Query: 549  LQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDP 370
            L KS I+CVQLVGSM++ ARDAAIK FT+DPDC+IFLMSLKAGGVALNLTVASHVFLMDP
Sbjct: 753  LHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 812

Query: 369  WWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEAL 190
            WWNPAVERQAQDRIHRIGQ KPIRI RF+IENTIEERILKLQ KKELVFEGTVGGS+EAL
Sbjct: 813  WWNPAVERQAQDRIHRIGQCKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEAL 872

Query: 189  VKLTEADLRFLF 154
             KLTEAD+RFLF
Sbjct: 873  GKLTEADMRFLF 884


>gb|KHG22444.1| ATP-dependent helicase rhp16 [Gossypium arboreum]
          Length = 885

 Score =  971 bits (2509), Expect = 0.0
 Identities = 492/732 (67%), Positives = 570/732 (77%), Gaps = 8/732 (1%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGIGGADVCEPSLERPSE---INC 2155
            LKQE+S T+GGILADEMGMGKTIQAIALVL KR +   IG  +V   +    ++   I C
Sbjct: 174  LKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRC 233

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLVICPVVAV QW +E+ RFT+ GST+VLVYHGANR K+V QFS+YDFV+TTYSIVEAEY
Sbjct: 234  TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEY 293

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPKEKC +CGKSF  KK++VHL+Y+CGPDAI               + K  + K 
Sbjct: 294  RKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTEN-----------QSKQERKKP 342

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            KS                               K   F+  E +A     L E       
Sbjct: 343  KSMFKSGKKHASNYEADSRKRASKKKAKHNKEDKDRDFEFDETSAGKEHNLPEG------ 396

Query: 1614 LKQSILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSLV 1435
              +S+LHSV+W RIILDEAHF+KDRR NTA+AVL+LES YKWALSGTPLQNRVGELYSLV
Sbjct: 397  --KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLV 454

Query: 1434 RFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYEG 1255
            RFLQI PYSYY C+DCDCK+LDYS ++QC  CPH SVRHFCWWNKY+ATPIQ+  +   G
Sbjct: 455  RFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIG 514

Query: 1254 RRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQLQ 1075
            +RAMILLKHK+LK+IVLRRTKKGRA+DLALPPRI+++RRDT+D+KE DYYES+Y++SQ Q
Sbjct: 515  KRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQ 574

Query: 1074 FNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQSNTYNG-----EHEC 910
            FNTY++AG +M+NYAHIFDLLTRLRQAVDHPYLV+YS     ++  N  NG     E  C
Sbjct: 575  FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRA-GNIVNGDRNDDEQVC 633

Query: 909  GICHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKT 730
            GIC+DPAE PVVT+C H FCKACL D++A+LG VSCPSC + LTVD +T  +   Q +KT
Sbjct: 634  GICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKT 692

Query: 729  NIKGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYS 550
             +KG++  SILNRI L +FQTSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLDLI YS
Sbjct: 693  TLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYS 752

Query: 549  LQKSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDP 370
            L KS I+CVQLVGSM++ ARDAAIK FT+DPDC+IFLMSLKAGGVALNLTVASHVFLMDP
Sbjct: 753  LHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDP 812

Query: 369  WWNPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEAL 190
            WWNPAVERQAQDRIHRIGQ KPIRI RF+IENTIEERILKLQ KKELVFEGTVGGS+EAL
Sbjct: 813  WWNPAVERQAQDRIHRIGQCKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEAL 872

Query: 189  VKLTEADLRFLF 154
             KLTEAD+RFLF
Sbjct: 873  GKLTEADMRFLF 884


>ref|XP_011047250.1| PREDICTED: DNA repair protein RAD16 isoform X3 [Populus euphratica]
          Length = 833

 Score =  968 bits (2502), Expect = 0.0
 Identities = 489/732 (66%), Positives = 566/732 (77%), Gaps = 6/732 (0%)
 Frame = -1

Query: 2325 LKQEESVTRGGILADEMGMGKTIQAIALVLTKRAIARGI---GGADVCEPSLERPSEINC 2155
            L+QEES TRGGILADEMGMGKTIQAIALVL KR + + +    G      S    + I  
Sbjct: 143  LEQEESSTRGGILADEMGMGKTIQAIALVLAKRELHQNLFEFNGPSPFSGSSSDLAGIKA 202

Query: 2154 TLVICPVVAVLQWANEVSRFTAEGSTRVLVYHGANRKKSVTQFSDYDFVLTTYSIVEAEY 1975
            TLV+CPVVAV QW +E+ R+T +GST+VLVYHGANR+KS   F DYDFV+TTYSI+E+E+
Sbjct: 203  TLVVCPVVAVTQWVSEIDRYTTKGSTKVLVYHGANREKSSKLFHDYDFVITTYSIIESEF 262

Query: 1974 RKNVMPPKEKCVWCGKSFVPKKMAVHLRYFCGPDAIXXXXXXXXXXXKGGYELKPSQSKT 1795
            RK +MPPK+KCV+CG SF  KK+ VHL+YFCGPDA                  +  Q+K 
Sbjct: 263  RKYMMPPKKKCVYCGNSFYEKKLTVHLKYFCGPDANRTAK-------------QSKQAKK 309

Query: 1794 KSEQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGFQTGEVAASSSKGLAESNEDSSC 1615
            K + V                              A  Q  E     S+ +  S  +   
Sbjct: 310  KLKNVPS----------------------------ASKQKTESDKDKSRPMELSEAELGL 341

Query: 1614 LKQ-SILHSVRWNRIILDEAHFIKDRRSNTARAVLALESSYKWALSGTPLQNRVGELYSL 1438
             K+ S+LHS++W RIILDEAHFIKDRR NTA+AV AL+SSYKWALSGTPLQNRVGELYSL
Sbjct: 342  QKEKSLLHSLKWERIILDEAHFIKDRRCNTAKAVFALDSSYKWALSGTPLQNRVGELYSL 401

Query: 1437 VRFLQITPYSYYFCRDCDCKSLDYSVTSQCSNCPHKSVRHFCWWNKYIATPIQNSSSSYE 1258
            VRFLQI PYSYY C+DCDC++LDY  ++QCS+CPH SVRHFCWWNKY++ PIQ   ++  
Sbjct: 402  VRFLQIVPYSYYLCKDCDCRTLDYGSSTQCSSCPHSSVRHFCWWNKYVSNPIQKHGNADY 461

Query: 1257 GRRAMILLKHKLLKSIVLRRTKKGRASDLALPPRIVTMRRDTLDVKEEDYYESIYNDSQL 1078
            GRRAMILLKHK+LK+IVLRRTKKGRASDLALPPRIV +RRD LDV+EEDYYES+YN+SQ 
Sbjct: 462  GRRAMILLKHKVLKNIVLRRTKKGRASDLALPPRIVILRRDILDVREEDYYESLYNESQA 521

Query: 1077 QFNTYIEAGILMSNYAHIFDLLTRLRQAVDHPYLVIYSKNGGSKSQS--NTYNGEHECGI 904
            QFNTY+E G LM+NYAHIFDLLTRLRQAVDHPYLV+YSK    K  +  +  + ++ CGI
Sbjct: 522  QFNTYVEEGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTSALKGGNVVDLDSAKNACGI 581

Query: 903  CHDPAEAPVVTSCEHTFCKACLTDYAAALGQVSCPSCLKPLTVDFSTKVNPEAQGTKTNI 724
            CH+PAE PVVTSC H FCK CL D++A+ G+VSCP C K LTVDF+  V+   Q  KT I
Sbjct: 582  CHEPAEDPVVTSCAHGFCKTCLLDFSASFGEVSCPVCSKSLTVDFTGNVDAGDQTAKTTI 641

Query: 723  KGYRCGSILNRISLPEFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQ 544
            KG+R GSILNR+ L +FQTSTKI+ALREEIRFM ERDGSAKGIVFSQFTSFLDLIHYSL 
Sbjct: 642  KGFRSGSILNRVQLDDFQTSTKIEALREEIRFMAERDGSAKGIVFSQFTSFLDLIHYSLH 701

Query: 543  KSGIQCVQLVGSMTMTARDAAIKKFTDDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWW 364
            KSGI CVQLVGSM++ ARDAAIK+F +DPDC+IFLMSLKAGGVALNLTVASHVFLMDPWW
Sbjct: 702  KSGISCVQLVGSMSLAARDAAIKRFAEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWW 761

Query: 363  NPAVERQAQDRIHRIGQYKPIRITRFIIENTIEERILKLQAKKELVFEGTVGGSSEALVK 184
            NPAVERQAQDRIHRIGQYKPIRI RF+IENT+EERIL+LQ KKELVFEGTVGGSSEAL K
Sbjct: 762  NPAVERQAQDRIHRIGQYKPIRIVRFVIENTVEERILQLQEKKELVFEGTVGGSSEALGK 821

Query: 183  LTEADLRFLFST 148
            LTEADLRFLF+T
Sbjct: 822  LTEADLRFLFAT 833