BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00009215
         (1389 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010258908.1| PREDICTED: CCR4-NOT transcription complex su...   754   0.0  
ref|XP_010258907.1| PREDICTED: CCR4-NOT transcription complex su...   754   0.0  
ref|XP_010258906.1| PREDICTED: CCR4-NOT transcription complex su...   754   0.0  
ref|XP_010258905.1| PREDICTED: CCR4-NOT transcription complex su...   754   0.0  
ref|XP_010258904.1| PREDICTED: CCR4-NOT transcription complex su...   754   0.0  
ref|XP_010258902.1| PREDICTED: CCR4-NOT transcription complex su...   754   0.0  
ref|XP_010258901.1| PREDICTED: CCR4-NOT transcription complex su...   754   0.0  
ref|XP_010258903.1| PREDICTED: CCR4-NOT transcription complex su...   744   0.0  
ref|XP_010662444.1| PREDICTED: CCR4-NOT transcription complex su...   701   0.0  
emb|CBI24630.3| unnamed protein product [Vitis vinifera]              701   0.0  
ref|XP_007052187.1| Ccr4-not transcription complex, putative iso...   682   0.0  
ref|XP_007052186.1| Ccr4-not transcription complex, putative iso...   682   0.0  
ref|XP_007052185.1| Ccr4-not transcription complex, putative iso...   682   0.0  
gb|KJB49219.1| hypothetical protein B456_008G107100 [Gossypium r...   678   0.0  
gb|KJB49218.1| hypothetical protein B456_008G107100 [Gossypium r...   678   0.0  
gb|KJB49217.1| hypothetical protein B456_008G107100 [Gossypium r...   678   0.0  
ref|XP_012437512.1| PREDICTED: CCR4-NOT transcription complex su...   678   0.0  
ref|XP_012489730.1| PREDICTED: CCR4-NOT transcription complex su...   669   0.0  
ref|XP_012489729.1| PREDICTED: CCR4-NOT transcription complex su...   669   0.0  
ref|XP_012489728.1| PREDICTED: CCR4-NOT transcription complex su...   669   0.0  

>ref|XP_010258908.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X8
            [Nelumbo nucifera]
          Length = 2437

 Score =  754 bits (1947), Expect = 0.0
 Identities = 378/462 (81%), Positives = 419/462 (90%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ T SG+   SSS GFLRPSR   STGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE
Sbjct: 918  SQNTASGLATVSSSTGFLRPSRGIASTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 977

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKILFMINNIS  N+EAKAKEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 978  APASEIQDKILFMINNISAANLEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1037

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKALNKEI+KATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQ 
Sbjct: 1038 LKFLDKVNSKALNKEIVKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQA 1097

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK+LI+EAYEKGLMIAVIPFTSK+LEPCQ SLAYQPPNPWTM ILSLL EIYA
Sbjct: 1098 LRAREIDPKVLIIEAYEKGLMIAVIPFTSKILEPCQGSLAYQPPNPWTMGILSLLVEIYA 1157

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMKD+ PTSLLKDRVREVEGNPDFSNKDIG SQ Q V+E
Sbjct: 1158 LPNLKMNLKFDIEVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTE 1217

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V++G +S+L QVE+QPEV   SHP GH+++LSQY  PLHLASG L++DEKMA+LSLS+RL
Sbjct: 1218 VNSGILSTLGQVELQPEVVNPSHP-GHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRL 1276

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PSGQGL+Q+ PSQ+ FSVSQ+P  IPNI T +I+N KL+ LGL++HFQ ILP AMERAIK
Sbjct: 1277 PSGQGLSQVAPSQTPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIK 1336

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI++P+VQRSVTIAMQ+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1337 EIISPIVQRSVTIAMQTTKELVLKDYAMESDESRIYNAAHLM 1378


>ref|XP_010258907.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X7
            [Nelumbo nucifera]
          Length = 2439

 Score =  754 bits (1947), Expect = 0.0
 Identities = 378/462 (81%), Positives = 419/462 (90%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ T SG+   SSS GFLRPSR   STGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE
Sbjct: 918  SQNTASGLATVSSSTGFLRPSRGIASTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 977

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKILFMINNIS  N+EAKAKEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 978  APASEIQDKILFMINNISAANLEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1037

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKALNKEI+KATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQ 
Sbjct: 1038 LKFLDKVNSKALNKEIVKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQA 1097

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK+LI+EAYEKGLMIAVIPFTSK+LEPCQ SLAYQPPNPWTM ILSLL EIYA
Sbjct: 1098 LRAREIDPKVLIIEAYEKGLMIAVIPFTSKILEPCQGSLAYQPPNPWTMGILSLLVEIYA 1157

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMKD+ PTSLLKDRVREVEGNPDFSNKDIG SQ Q V+E
Sbjct: 1158 LPNLKMNLKFDIEVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTE 1217

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V++G +S+L QVE+QPEV   SHP GH+++LSQY  PLHLASG L++DEKMA+LSLS+RL
Sbjct: 1218 VNSGILSTLGQVELQPEVVNPSHP-GHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRL 1276

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PSGQGL+Q+ PSQ+ FSVSQ+P  IPNI T +I+N KL+ LGL++HFQ ILP AMERAIK
Sbjct: 1277 PSGQGLSQVAPSQTPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIK 1336

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI++P+VQRSVTIAMQ+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1337 EIISPIVQRSVTIAMQTTKELVLKDYAMESDESRIYNAAHLM 1378


>ref|XP_010258906.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X6
            [Nelumbo nucifera]
          Length = 2446

 Score =  754 bits (1947), Expect = 0.0
 Identities = 378/462 (81%), Positives = 419/462 (90%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ T SG+   SSS GFLRPSR   STGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE
Sbjct: 925  SQNTASGLATVSSSTGFLRPSRGIASTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 984

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKILFMINNIS  N+EAKAKEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 985  APASEIQDKILFMINNISAANLEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1044

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKALNKEI+KATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQ 
Sbjct: 1045 LKFLDKVNSKALNKEIVKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQA 1104

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK+LI+EAYEKGLMIAVIPFTSK+LEPCQ SLAYQPPNPWTM ILSLL EIYA
Sbjct: 1105 LRAREIDPKVLIIEAYEKGLMIAVIPFTSKILEPCQGSLAYQPPNPWTMGILSLLVEIYA 1164

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMKD+ PTSLLKDRVREVEGNPDFSNKDIG SQ Q V+E
Sbjct: 1165 LPNLKMNLKFDIEVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTE 1224

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V++G +S+L QVE+QPEV   SHP GH+++LSQY  PLHLASG L++DEKMA+LSLS+RL
Sbjct: 1225 VNSGILSTLGQVELQPEVVNPSHP-GHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRL 1283

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PSGQGL+Q+ PSQ+ FSVSQ+P  IPNI T +I+N KL+ LGL++HFQ ILP AMERAIK
Sbjct: 1284 PSGQGLSQVAPSQTPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIK 1343

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI++P+VQRSVTIAMQ+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1344 EIISPIVQRSVTIAMQTTKELVLKDYAMESDESRIYNAAHLM 1385


>ref|XP_010258905.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X5
            [Nelumbo nucifera]
          Length = 2447

 Score =  754 bits (1947), Expect = 0.0
 Identities = 378/462 (81%), Positives = 419/462 (90%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ T SG+   SSS GFLRPSR   STGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE
Sbjct: 926  SQNTASGLATVSSSTGFLRPSRGIASTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 985

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKILFMINNIS  N+EAKAKEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 986  APASEIQDKILFMINNISAANLEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1045

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKALNKEI+KATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQ 
Sbjct: 1046 LKFLDKVNSKALNKEIVKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQA 1105

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK+LI+EAYEKGLMIAVIPFTSK+LEPCQ SLAYQPPNPWTM ILSLL EIYA
Sbjct: 1106 LRAREIDPKVLIIEAYEKGLMIAVIPFTSKILEPCQGSLAYQPPNPWTMGILSLLVEIYA 1165

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMKD+ PTSLLKDRVREVEGNPDFSNKDIG SQ Q V+E
Sbjct: 1166 LPNLKMNLKFDIEVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTE 1225

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V++G +S+L QVE+QPEV   SHP GH+++LSQY  PLHLASG L++DEKMA+LSLS+RL
Sbjct: 1226 VNSGILSTLGQVELQPEVVNPSHP-GHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRL 1284

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PSGQGL+Q+ PSQ+ FSVSQ+P  IPNI T +I+N KL+ LGL++HFQ ILP AMERAIK
Sbjct: 1285 PSGQGLSQVAPSQTPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIK 1344

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI++P+VQRSVTIAMQ+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1345 EIISPIVQRSVTIAMQTTKELVLKDYAMESDESRIYNAAHLM 1386


>ref|XP_010258904.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X4
            [Nelumbo nucifera]
          Length = 2448

 Score =  754 bits (1947), Expect = 0.0
 Identities = 378/462 (81%), Positives = 419/462 (90%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ T SG+   SSS GFLRPSR   STGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE
Sbjct: 933  SQNTASGLATVSSSTGFLRPSRGIASTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 992

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKILFMINNIS  N+EAKAKEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 993  APASEIQDKILFMINNISAANLEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1052

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKALNKEI+KATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQ 
Sbjct: 1053 LKFLDKVNSKALNKEIVKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQA 1112

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK+LI+EAYEKGLMIAVIPFTSK+LEPCQ SLAYQPPNPWTM ILSLL EIYA
Sbjct: 1113 LRAREIDPKVLIIEAYEKGLMIAVIPFTSKILEPCQGSLAYQPPNPWTMGILSLLVEIYA 1172

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMKD+ PTSLLKDRVREVEGNPDFSNKDIG SQ Q V+E
Sbjct: 1173 LPNLKMNLKFDIEVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTE 1232

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V++G +S+L QVE+QPEV   SHP GH+++LSQY  PLHLASG L++DEKMA+LSLS+RL
Sbjct: 1233 VNSGILSTLGQVELQPEVVNPSHP-GHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRL 1291

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PSGQGL+Q+ PSQ+ FSVSQ+P  IPNI T +I+N KL+ LGL++HFQ ILP AMERAIK
Sbjct: 1292 PSGQGLSQVAPSQTPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIK 1351

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI++P+VQRSVTIAMQ+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1352 EIISPIVQRSVTIAMQTTKELVLKDYAMESDESRIYNAAHLM 1393


>ref|XP_010258902.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X2
            [Nelumbo nucifera]
          Length = 2452

 Score =  754 bits (1947), Expect = 0.0
 Identities = 378/462 (81%), Positives = 419/462 (90%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ T SG+   SSS GFLRPSR   STGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE
Sbjct: 933  SQNTASGLATVSSSTGFLRPSRGIASTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 992

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKILFMINNIS  N+EAKAKEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 993  APASEIQDKILFMINNISAANLEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1052

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKALNKEI+KATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQ 
Sbjct: 1053 LKFLDKVNSKALNKEIVKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQA 1112

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK+LI+EAYEKGLMIAVIPFTSK+LEPCQ SLAYQPPNPWTM ILSLL EIYA
Sbjct: 1113 LRAREIDPKVLIIEAYEKGLMIAVIPFTSKILEPCQGSLAYQPPNPWTMGILSLLVEIYA 1172

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMKD+ PTSLLKDRVREVEGNPDFSNKDIG SQ Q V+E
Sbjct: 1173 LPNLKMNLKFDIEVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTE 1232

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V++G +S+L QVE+QPEV   SHP GH+++LSQY  PLHLASG L++DEKMA+LSLS+RL
Sbjct: 1233 VNSGILSTLGQVELQPEVVNPSHP-GHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRL 1291

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PSGQGL+Q+ PSQ+ FSVSQ+P  IPNI T +I+N KL+ LGL++HFQ ILP AMERAIK
Sbjct: 1292 PSGQGLSQVAPSQTPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIK 1351

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI++P+VQRSVTIAMQ+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1352 EIISPIVQRSVTIAMQTTKELVLKDYAMESDESRIYNAAHLM 1393


>ref|XP_010258901.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X1
            [Nelumbo nucifera]
          Length = 2454

 Score =  754 bits (1947), Expect = 0.0
 Identities = 378/462 (81%), Positives = 419/462 (90%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ T SG+   SSS GFLRPSR   STGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE
Sbjct: 933  SQNTASGLATVSSSTGFLRPSRGIASTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 992

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKILFMINNIS  N+EAKAKEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 993  APASEIQDKILFMINNISAANLEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1052

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKALNKEI+KATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQ 
Sbjct: 1053 LKFLDKVNSKALNKEIVKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQA 1112

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK+LI+EAYEKGLMIAVIPFTSK+LEPCQ SLAYQPPNPWTM ILSLL EIYA
Sbjct: 1113 LRAREIDPKVLIIEAYEKGLMIAVIPFTSKILEPCQGSLAYQPPNPWTMGILSLLVEIYA 1172

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMKD+ PTSLLKDRVREVEGNPDFSNKDIG SQ Q V+E
Sbjct: 1173 LPNLKMNLKFDIEVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTE 1232

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V++G +S+L QVE+QPEV   SHP GH+++LSQY  PLHLASG L++DEKMA+LSLS+RL
Sbjct: 1233 VNSGILSTLGQVELQPEVVNPSHP-GHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRL 1291

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PSGQGL+Q+ PSQ+ FSVSQ+P  IPNI T +I+N KL+ LGL++HFQ ILP AMERAIK
Sbjct: 1292 PSGQGLSQVAPSQTPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIK 1351

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI++P+VQRSVTIAMQ+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1352 EIISPIVQRSVTIAMQTTKELVLKDYAMESDESRIYNAAHLM 1393


>ref|XP_010258903.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X3
            [Nelumbo nucifera]
          Length = 2451

 Score =  744 bits (1920), Expect = 0.0
 Identities = 375/462 (81%), Positives = 416/462 (90%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ T SG+   SSS GFLRPSR   STGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE
Sbjct: 933  SQNTASGLATVSSSTGFLRPSRGIASTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 992

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKILFMINNIS  N+EAKAKEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 993  APASEIQDKILFMINNISAANLEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1052

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKALNKEI+KATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQ 
Sbjct: 1053 LKFLDKVNSKALNKEIVKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQA 1112

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK+LI+EAYEKGLMIAVIPFTSK+LEPCQ SLAYQPPNPWTM ILSLL EIYA
Sbjct: 1113 LRAREIDPKVLIIEAYEKGLMIAVIPFTSKILEPCQGSLAYQPPNPWTMGILSLLVEIYA 1172

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMKD+ PTSLLKDRVREVEGNPDFSNKDIG SQ Q V+E
Sbjct: 1173 LPNLKMNLKFDIEVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTE 1232

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V++G +S+L QVE+QPEV   SHP GH+++LSQY  PLHLASG L++DEKMA+LSLS+RL
Sbjct: 1233 VNSGILSTLGQVELQPEVVNPSHP-GHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRL 1291

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PSGQGL+Q+ PSQ+ FS   +P  IPNI T +I+N KL+ LGL++HFQ ILP AMERAIK
Sbjct: 1292 PSGQGLSQVAPSQTPFS---LPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIK 1348

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI++P+VQRSVTIAMQ+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1349 EIISPIVQRSVTIAMQTTKELVLKDYAMESDESRIYNAAHLM 1390


>ref|XP_010662444.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 2457

 Score =  701 bits (1808), Expect = 0.0
 Identities = 348/462 (75%), Positives = 401/462 (86%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQT        SSS G L PSR   ST MLRQ SYNTGFGSALNIETLVAAAERRDT IE
Sbjct: 939  SQTATGVSAAVSSSTGLLHPSRXIASTSMLRQPSYNTGFGSALNIETLVAAAERRDTHIE 998

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             P  E+QDKI F+INNI++ NIEAKAKEF+++L E+YYPWFA+YMVMKRASIEPNF D Y
Sbjct: 999  APTSEIQDKISFLINNIASANIEAKAKEFTEVLDEQYYPWFARYMVMKRASIEPNFHDSY 1058

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSK LNKEI+KA YENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV
Sbjct: 1059 LKFLDKVNSKTLNKEIVKAAYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 1118

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK LI+EAYEKGLMIAV+PFTSK+LEPCQSSLAY+PPNPWTMAIL LL EIYA
Sbjct: 1119 LRAREIDPKSLIIEAYEKGLMIAVVPFTSKILEPCQSSLAYRPPNPWTMAILGLLVEIYA 1178

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMK++ PTSLLKDRVRE+EGNPDFSNKD+G SQPQ VS+
Sbjct: 1179 LPNLKMNLKFDIEVLFKNLGVDMKEVKPTSLLKDRVREIEGNPDFSNKDVGASQPQMVSD 1238

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            ++ G +S+LSQVE+QP++   SHPGGH ++++QY + LHLASG L +D+K+A+LSL +RL
Sbjct: 1239 INPGIMSTLSQVELQPDIVNSSHPGGHLNVMTQYPSGLHLASGSLTEDDKIATLSLGDRL 1298

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            P+GQGL+Q+ P+QS +SV Q+PA IPNI + II N KL ALGL  +FQ ++P AMERAIK
Sbjct: 1299 PTGQGLSQVPPAQSPYSVGQIPAPIPNIGSHIIFNQKLGALGLH-YFQRVVPIAMERAIK 1357

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            +IM P+VQRSVTIA Q+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1358 DIMAPIVQRSVTIATQTTKELVLKDYAMESDESRIYNAAHLM 1399


>emb|CBI24630.3| unnamed protein product [Vitis vinifera]
          Length = 1496

 Score =  701 bits (1808), Expect = 0.0
 Identities = 348/462 (75%), Positives = 401/462 (86%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQT        SSS G L PSR   ST MLRQ SYNTGFGSALNIETLVAAAERRDT IE
Sbjct: 934  SQTATGVSAAVSSSTGLLHPSRXIASTSMLRQPSYNTGFGSALNIETLVAAAERRDTHIE 993

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             P  E+QDKI F+INNI++ NIEAKAKEF+++L E+YYPWFA+YMVMKRASIEPNF D Y
Sbjct: 994  APTSEIQDKISFLINNIASANIEAKAKEFTEVLDEQYYPWFARYMVMKRASIEPNFHDSY 1053

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSK LNKEI+KA YENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV
Sbjct: 1054 LKFLDKVNSKTLNKEIVKAAYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 1113

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK LI+EAYEKGLMIAV+PFTSK+LEPCQSSLAY+PPNPWTMAIL LL EIYA
Sbjct: 1114 LRAREIDPKSLIIEAYEKGLMIAVVPFTSKILEPCQSSLAYRPPNPWTMAILGLLVEIYA 1173

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            LPNLKMNLKFDIEVLFKNL VDMK++ PTSLLKDRVRE+EGNPDFSNKD+G SQPQ VS+
Sbjct: 1174 LPNLKMNLKFDIEVLFKNLGVDMKEVKPTSLLKDRVREIEGNPDFSNKDVGASQPQMVSD 1233

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            ++ G +S+LSQVE+QP++   SHPGGH ++++QY + LHLASG L +D+K+A+LSL +RL
Sbjct: 1234 INPGIMSTLSQVELQPDIVNSSHPGGHLNVMTQYPSGLHLASGSLTEDDKIATLSLGDRL 1293

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            P+GQGL+Q+ P+QS +SV Q+PA IPNI + II N KL ALGL  +FQ ++P AMERAIK
Sbjct: 1294 PTGQGLSQVPPAQSPYSVGQIPAPIPNIGSHIIFNQKLGALGLH-YFQRVVPIAMERAIK 1352

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            +IM P+VQRSVTIA Q+T+ELVLKD+ MESDESRIYNAAHLM
Sbjct: 1353 DIMAPIVQRSVTIATQTTKELVLKDYAMESDESRIYNAAHLM 1394


>ref|XP_007052187.1| Ccr4-not transcription complex, putative isoform 3 [Theobroma cacao]
            gi|508704448|gb|EOX96344.1| Ccr4-not transcription
            complex, putative isoform 3 [Theobroma cacao]
          Length = 1941

 Score =  682 bits (1760), Expect = 0.0
 Identities = 344/461 (74%), Positives = 395/461 (85%)
 Frame = +2

Query: 5    QTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIET 184
            Q   SG +  S+SPGF+RPSR  TST           FGSALNIETLVAAAERR+TPIE 
Sbjct: 914  QNAVSGSSMLSASPGFVRPSRGVTSTR----------FGSALNIETLVAAAERRETPIEA 963

Query: 185  PAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLYL 364
            PA E+QDKI F+INNIS  NIEAK KEF++ILKE+YYPWFA+YMVMKRASIEPNF DLYL
Sbjct: 964  PASEIQDKISFIINNISAANIEAKGKEFNEILKEQYYPWFAEYMVMKRASIEPNFHDLYL 1023

Query: 365  KFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQVL 544
            KF+DK+NSKALNKEI++ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQVL
Sbjct: 1024 KFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVL 1083

Query: 545  RAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYAL 724
            RAREIDPK LI+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM IL+LLAEIY++
Sbjct: 1084 RAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILALLAEIYSM 1143

Query: 725  PNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSEV 904
            PNLKMNLKFDIEVLFKNL VDMKD+TPTSLLKDR RE+EGNPDFSNKD+G  QPQ V+EV
Sbjct: 1144 PNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGACQPQMVAEV 1203

Query: 905  SAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLP 1084
             +G IS L+ VE+  EVA+  + GGH HLLSQY  PL L+SG L++DEK+A+L LS++LP
Sbjct: 1204 KSGIISPLNHVELPLEVASPPNSGGHTHLLSQYAGPLRLSSGALMEDEKLAALGLSDQLP 1263

Query: 1085 SGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIKE 1264
            S QGL Q TPSQS FSV+Q+ A IPNI T +I+N KL+ALGL +HFQ ++P AM+RAIKE
Sbjct: 1264 SAQGLFQATPSQSPFSVNQLSAAIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKE 1323

Query: 1265 IMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            I+  +VQRSV+IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1324 IVAGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLM 1364


>ref|XP_007052186.1| Ccr4-not transcription complex, putative isoform 2 [Theobroma cacao]
            gi|508704447|gb|EOX96343.1| Ccr4-not transcription
            complex, putative isoform 2 [Theobroma cacao]
          Length = 2411

 Score =  682 bits (1760), Expect = 0.0
 Identities = 344/461 (74%), Positives = 395/461 (85%)
 Frame = +2

Query: 5    QTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIET 184
            Q   SG +  S+SPGF+RPSR  TST           FGSALNIETLVAAAERR+TPIE 
Sbjct: 914  QNAVSGSSMLSASPGFVRPSRGVTSTR----------FGSALNIETLVAAAERRETPIEA 963

Query: 185  PAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLYL 364
            PA E+QDKI F+INNIS  NIEAK KEF++ILKE+YYPWFA+YMVMKRASIEPNF DLYL
Sbjct: 964  PASEIQDKISFIINNISAANIEAKGKEFNEILKEQYYPWFAEYMVMKRASIEPNFHDLYL 1023

Query: 365  KFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQVL 544
            KF+DK+NSKALNKEI++ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQVL
Sbjct: 1024 KFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVL 1083

Query: 545  RAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYAL 724
            RAREIDPK LI+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM IL+LLAEIY++
Sbjct: 1084 RAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILALLAEIYSM 1143

Query: 725  PNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSEV 904
            PNLKMNLKFDIEVLFKNL VDMKD+TPTSLLKDR RE+EGNPDFSNKD+G  QPQ V+EV
Sbjct: 1144 PNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGACQPQMVAEV 1203

Query: 905  SAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLP 1084
             +G IS L+ VE+  EVA+  + GGH HLLSQY  PL L+SG L++DEK+A+L LS++LP
Sbjct: 1204 KSGIISPLNHVELPLEVASPPNSGGHTHLLSQYAGPLRLSSGALMEDEKLAALGLSDQLP 1263

Query: 1085 SGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIKE 1264
            S QGL Q TPSQS FSV+Q+ A IPNI T +I+N KL+ALGL +HFQ ++P AM+RAIKE
Sbjct: 1264 SAQGLFQATPSQSPFSVNQLSAAIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKE 1323

Query: 1265 IMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            I+  +VQRSV+IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1324 IVAGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLM 1364


>ref|XP_007052185.1| Ccr4-not transcription complex, putative isoform 1 [Theobroma cacao]
            gi|508704446|gb|EOX96342.1| Ccr4-not transcription
            complex, putative isoform 1 [Theobroma cacao]
          Length = 2413

 Score =  682 bits (1760), Expect = 0.0
 Identities = 344/461 (74%), Positives = 395/461 (85%)
 Frame = +2

Query: 5    QTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIET 184
            Q   SG +  S+SPGF+RPSR  TST           FGSALNIETLVAAAERR+TPIE 
Sbjct: 914  QNAVSGSSMLSASPGFVRPSRGVTSTR----------FGSALNIETLVAAAERRETPIEA 963

Query: 185  PAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLYL 364
            PA E+QDKI F+INNIS  NIEAK KEF++ILKE+YYPWFA+YMVMKRASIEPNF DLYL
Sbjct: 964  PASEIQDKISFIINNISAANIEAKGKEFNEILKEQYYPWFAEYMVMKRASIEPNFHDLYL 1023

Query: 365  KFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQVL 544
            KF+DK+NSKALNKEI++ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQVL
Sbjct: 1024 KFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVL 1083

Query: 545  RAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYAL 724
            RAREIDPK LI+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM IL+LLAEIY++
Sbjct: 1084 RAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILALLAEIYSM 1143

Query: 725  PNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSEV 904
            PNLKMNLKFDIEVLFKNL VDMKD+TPTSLLKDR RE+EGNPDFSNKD+G  QPQ V+EV
Sbjct: 1144 PNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGACQPQMVAEV 1203

Query: 905  SAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLP 1084
             +G IS L+ VE+  EVA+  + GGH HLLSQY  PL L+SG L++DEK+A+L LS++LP
Sbjct: 1204 KSGIISPLNHVELPLEVASPPNSGGHTHLLSQYAGPLRLSSGALMEDEKLAALGLSDQLP 1263

Query: 1085 SGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIKE 1264
            S QGL Q TPSQS FSV+Q+ A IPNI T +I+N KL+ALGL +HFQ ++P AM+RAIKE
Sbjct: 1264 SAQGLFQATPSQSPFSVNQLSAAIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKE 1323

Query: 1265 IMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            I+  +VQRSV+IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1324 IVAGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLM 1364


>gb|KJB49219.1| hypothetical protein B456_008G107100 [Gossypium raimondii]
          Length = 2412

 Score =  678 bits (1749), Expect = 0.0
 Identities = 342/451 (75%), Positives = 388/451 (86%)
 Frame = +2

Query: 35   SSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIETPAPEVQDKIL 214
            S+SPGF+RPSR  TST           FGSALNIETLVAAAERR+TPIE P  ++QDKI 
Sbjct: 924  SASPGFVRPSRGVTSTR----------FGSALNIETLVAAAERRETPIEAPTSDIQDKIS 973

Query: 215  FMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLYLKFIDKINSKA 394
            F+INNIS  NIEAK KEF++ILKE+YYPWFAQYMVMKRASIEPNF DLYLKF+DK+NSKA
Sbjct: 974  FIINNISVANIEAKGKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKA 1033

Query: 395  LNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQVLRAREIDPKML 574
            LNKEII+ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQVLRAREIDPK L
Sbjct: 1034 LNKEIIQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSL 1093

Query: 575  IMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYALPNLKMNLKFD 754
            I+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM IL+LLAEIY++PNLKMNLKFD
Sbjct: 1094 IIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILALLAEIYSMPNLKMNLKFD 1153

Query: 755  IEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSEVSAGAISSLSQ 934
            IEVLFKNL VDMKD+TPTSLLKDR RE+EGNPDFSNKD+G SQPQ V E   G IS L+ 
Sbjct: 1154 IEVLFKNLGVDMKDITPTSLLKDRKRELEGNPDFSNKDVGASQPQMVPEAKTGIISPLNH 1213

Query: 935  VEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLPSGQGLTQLTP 1114
            V+I  EVA+  +PGGH HLLSQY  PL L+SG LV+DEK+A+L LS++LPS QGL Q +P
Sbjct: 1214 VDIPLEVASPPNPGGHTHLLSQYAGPLRLSSGALVEDEKLAALGLSDQLPSAQGLFQASP 1273

Query: 1115 SQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIKEIMTPVVQRSV 1294
            SQS FSVSQ+   IPNI T +I+N KL+ALGL +HFQ ++P AM+RAIKEI+  +VQRSV
Sbjct: 1274 SQSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKEIVAGIVQRSV 1333

Query: 1295 TIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            +IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1334 SIATQTTKELVLKDYAMESDETRIYNAAHLM 1364


>gb|KJB49218.1| hypothetical protein B456_008G107100 [Gossypium raimondii]
          Length = 2290

 Score =  678 bits (1749), Expect = 0.0
 Identities = 342/451 (75%), Positives = 388/451 (86%)
 Frame = +2

Query: 35   SSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIETPAPEVQDKIL 214
            S+SPGF+RPSR  TST           FGSALNIETLVAAAERR+TPIE P  ++QDKI 
Sbjct: 924  SASPGFVRPSRGVTSTR----------FGSALNIETLVAAAERRETPIEAPTSDIQDKIS 973

Query: 215  FMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLYLKFIDKINSKA 394
            F+INNIS  NIEAK KEF++ILKE+YYPWFAQYMVMKRASIEPNF DLYLKF+DK+NSKA
Sbjct: 974  FIINNISVANIEAKGKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKA 1033

Query: 395  LNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQVLRAREIDPKML 574
            LNKEII+ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQVLRAREIDPK L
Sbjct: 1034 LNKEIIQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSL 1093

Query: 575  IMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYALPNLKMNLKFD 754
            I+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM IL+LLAEIY++PNLKMNLKFD
Sbjct: 1094 IIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILALLAEIYSMPNLKMNLKFD 1153

Query: 755  IEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSEVSAGAISSLSQ 934
            IEVLFKNL VDMKD+TPTSLLKDR RE+EGNPDFSNKD+G SQPQ V E   G IS L+ 
Sbjct: 1154 IEVLFKNLGVDMKDITPTSLLKDRKRELEGNPDFSNKDVGASQPQMVPEAKTGIISPLNH 1213

Query: 935  VEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLPSGQGLTQLTP 1114
            V+I  EVA+  +PGGH HLLSQY  PL L+SG LV+DEK+A+L LS++LPS QGL Q +P
Sbjct: 1214 VDIPLEVASPPNPGGHTHLLSQYAGPLRLSSGALVEDEKLAALGLSDQLPSAQGLFQASP 1273

Query: 1115 SQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIKEIMTPVVQRSV 1294
            SQS FSVSQ+   IPNI T +I+N KL+ALGL +HFQ ++P AM+RAIKEI+  +VQRSV
Sbjct: 1274 SQSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKEIVAGIVQRSV 1333

Query: 1295 TIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            +IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1334 SIATQTTKELVLKDYAMESDETRIYNAAHLM 1364


>gb|KJB49217.1| hypothetical protein B456_008G107100 [Gossypium raimondii]
          Length = 2411

 Score =  678 bits (1749), Expect = 0.0
 Identities = 342/451 (75%), Positives = 388/451 (86%)
 Frame = +2

Query: 35   SSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIETPAPEVQDKIL 214
            S+SPGF+RPSR  TST           FGSALNIETLVAAAERR+TPIE P  ++QDKI 
Sbjct: 924  SASPGFVRPSRGVTSTR----------FGSALNIETLVAAAERRETPIEAPTSDIQDKIS 973

Query: 215  FMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLYLKFIDKINSKA 394
            F+INNIS  NIEAK KEF++ILKE+YYPWFAQYMVMKRASIEPNF DLYLKF+DK+NSKA
Sbjct: 974  FIINNISVANIEAKGKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKA 1033

Query: 395  LNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQVLRAREIDPKML 574
            LNKEII+ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQVLRAREIDPK L
Sbjct: 1034 LNKEIIQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSL 1093

Query: 575  IMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYALPNLKMNLKFD 754
            I+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM IL+LLAEIY++PNLKMNLKFD
Sbjct: 1094 IIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILALLAEIYSMPNLKMNLKFD 1153

Query: 755  IEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSEVSAGAISSLSQ 934
            IEVLFKNL VDMKD+TPTSLLKDR RE+EGNPDFSNKD+G SQPQ V E   G IS L+ 
Sbjct: 1154 IEVLFKNLGVDMKDITPTSLLKDRKRELEGNPDFSNKDVGASQPQMVPEAKTGIISPLNH 1213

Query: 935  VEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLPSGQGLTQLTP 1114
            V+I  EVA+  +PGGH HLLSQY  PL L+SG LV+DEK+A+L LS++LPS QGL Q +P
Sbjct: 1214 VDIPLEVASPPNPGGHTHLLSQYAGPLRLSSGALVEDEKLAALGLSDQLPSAQGLFQASP 1273

Query: 1115 SQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIKEIMTPVVQRSV 1294
            SQS FSVSQ+   IPNI T +I+N KL+ALGL +HFQ ++P AM+RAIKEI+  +VQRSV
Sbjct: 1274 SQSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKEIVAGIVQRSV 1333

Query: 1295 TIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            +IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1334 SIATQTTKELVLKDYAMESDETRIYNAAHLM 1364


>ref|XP_012437512.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Gossypium
            raimondii] gi|763782145|gb|KJB49216.1| hypothetical
            protein B456_008G107100 [Gossypium raimondii]
          Length = 2413

 Score =  678 bits (1749), Expect = 0.0
 Identities = 342/451 (75%), Positives = 388/451 (86%)
 Frame = +2

Query: 35   SSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIETPAPEVQDKIL 214
            S+SPGF+RPSR  TST           FGSALNIETLVAAAERR+TPIE P  ++QDKI 
Sbjct: 924  SASPGFVRPSRGVTSTR----------FGSALNIETLVAAAERRETPIEAPTSDIQDKIS 973

Query: 215  FMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLYLKFIDKINSKA 394
            F+INNIS  NIEAK KEF++ILKE+YYPWFAQYMVMKRASIEPNF DLYLKF+DK+NSKA
Sbjct: 974  FIINNISVANIEAKGKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKA 1033

Query: 395  LNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQVLRAREIDPKML 574
            LNKEII+ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQVLRAREIDPK L
Sbjct: 1034 LNKEIIQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSL 1093

Query: 575  IMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYALPNLKMNLKFD 754
            I+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM IL+LLAEIY++PNLKMNLKFD
Sbjct: 1094 IIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILALLAEIYSMPNLKMNLKFD 1153

Query: 755  IEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSEVSAGAISSLSQ 934
            IEVLFKNL VDMKD+TPTSLLKDR RE+EGNPDFSNKD+G SQPQ V E   G IS L+ 
Sbjct: 1154 IEVLFKNLGVDMKDITPTSLLKDRKRELEGNPDFSNKDVGASQPQMVPEAKTGIISPLNH 1213

Query: 935  VEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLPSGQGLTQLTP 1114
            V+I  EVA+  +PGGH HLLSQY  PL L+SG LV+DEK+A+L LS++LPS QGL Q +P
Sbjct: 1214 VDIPLEVASPPNPGGHTHLLSQYAGPLRLSSGALVEDEKLAALGLSDQLPSAQGLFQASP 1273

Query: 1115 SQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIKEIMTPVVQRSV 1294
            SQS FSVSQ+   IPNI T +I+N KL+ALGL +HFQ ++P AM+RAIKEI+  +VQRSV
Sbjct: 1274 SQSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKEIVAGIVQRSV 1333

Query: 1295 TIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            +IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1334 SIATQTTKELVLKDYAMESDETRIYNAAHLM 1364


>ref|XP_012489730.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X4
            [Gossypium raimondii]
          Length = 2338

 Score =  669 bits (1725), Expect = 0.0
 Identities = 339/462 (73%), Positives = 392/462 (84%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ+  SG +  S+SPGF+R SR  TST           FGSALNIETLVAAAERR+TPIE
Sbjct: 838  SQSVGSGSSMLSASPGFVRSSRGVTSTR----------FGSALNIETLVAAAERRETPIE 887

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKI F+INNIS  NIEAK KEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 888  APASEIQDKISFIINNISVANIEAKGKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 947

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKAL KEI++ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQV
Sbjct: 948  LKFLDKVNSKALTKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQV 1007

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK LI+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM ILSLLAEIY+
Sbjct: 1008 LRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILSLLAEIYS 1067

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            +PNLKMNLKFDIEVLFKNL VDMKD++PTSLLKDR RE+EGNPDFSNKD+GVSQ   V+E
Sbjct: 1068 MPNLKMNLKFDIEVLFKNLGVDMKDISPTSLLKDRKRELEGNPDFSNKDVGVSQAPMVAE 1127

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V +G IS L+ V++  E A+  + GG  HLLSQY  PL L+SG L++DEK+A+L LS++L
Sbjct: 1128 VKSGIISPLNHVDLSLEGASPPNSGGPTHLLSQYAGPLRLSSGALMEDEKLAALGLSDQL 1187

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PS QGL Q TPSQS FSVSQ+   IPNI T +I+N KL++LGL +HFQ ++P AM+RAIK
Sbjct: 1188 PSAQGLFQATPSQSPFSVSQLSTSIPNIGTHVIINQKLSSLGLHMHFQRVVPIAMDRAIK 1247

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI+  ++QRSV+IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1248 EIVAGIIQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLM 1289


>ref|XP_012489729.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X3
            [Gossypium raimondii]
          Length = 2407

 Score =  669 bits (1725), Expect = 0.0
 Identities = 339/462 (73%), Positives = 392/462 (84%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ+  SG +  S+SPGF+R SR  TST           FGSALNIETLVAAAERR+TPIE
Sbjct: 907  SQSVGSGSSMLSASPGFVRSSRGVTSTR----------FGSALNIETLVAAAERRETPIE 956

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKI F+INNIS  NIEAK KEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 957  APASEIQDKISFIINNISVANIEAKGKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1016

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKAL KEI++ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQV
Sbjct: 1017 LKFLDKVNSKALTKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQV 1076

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK LI+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM ILSLLAEIY+
Sbjct: 1077 LRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILSLLAEIYS 1136

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            +PNLKMNLKFDIEVLFKNL VDMKD++PTSLLKDR RE+EGNPDFSNKD+GVSQ   V+E
Sbjct: 1137 MPNLKMNLKFDIEVLFKNLGVDMKDISPTSLLKDRKRELEGNPDFSNKDVGVSQAPMVAE 1196

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V +G IS L+ V++  E A+  + GG  HLLSQY  PL L+SG L++DEK+A+L LS++L
Sbjct: 1197 VKSGIISPLNHVDLSLEGASPPNSGGPTHLLSQYAGPLRLSSGALMEDEKLAALGLSDQL 1256

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PS QGL Q TPSQS FSVSQ+   IPNI T +I+N KL++LGL +HFQ ++P AM+RAIK
Sbjct: 1257 PSAQGLFQATPSQSPFSVSQLSTSIPNIGTHVIINQKLSSLGLHMHFQRVVPIAMDRAIK 1316

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI+  ++QRSV+IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1317 EIVAGIIQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLM 1358


>ref|XP_012489728.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X2
            [Gossypium raimondii]
          Length = 2413

 Score =  669 bits (1725), Expect = 0.0
 Identities = 339/462 (73%), Positives = 392/462 (84%)
 Frame = +2

Query: 2    SQTTNSGMTPASSSPGFLRPSRATTSTGMLRQHSYNTGFGSALNIETLVAAAERRDTPIE 181
            SQ+  SG +  S+SPGF+R SR  TST           FGSALNIETLVAAAERR+TPIE
Sbjct: 913  SQSVGSGSSMLSASPGFVRSSRGVTSTR----------FGSALNIETLVAAAERRETPIE 962

Query: 182  TPAPEVQDKILFMINNISTTNIEAKAKEFSDILKEEYYPWFAQYMVMKRASIEPNFLDLY 361
             PA E+QDKI F+INNIS  NIEAK KEF++ILKE+YYPWFAQYMVMKRASIEPNF DLY
Sbjct: 963  APASEIQDKISFIINNISVANIEAKGKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLY 1022

Query: 362  LKFIDKINSKALNKEIIKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKFTIGRNQV 541
            LKF+DK+NSKAL KEI++ATYENCKVLL SELIKSSSEERSLLKNLGSWLGK TIGRNQV
Sbjct: 1023 LKFLDKVNSKALTKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQV 1082

Query: 542  LRAREIDPKMLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMAILSLLAEIYA 721
            LRAREIDPK LI+EAYEKGLMIAVIPFTSK+LEPCQSSLAYQPPNPWTM ILSLLAEIY+
Sbjct: 1083 LRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILSLLAEIYS 1142

Query: 722  LPNLKMNLKFDIEVLFKNLSVDMKDLTPTSLLKDRVREVEGNPDFSNKDIGVSQPQSVSE 901
            +PNLKMNLKFDIEVLFKNL VDMKD++PTSLLKDR RE+EGNPDFSNKD+GVSQ   V+E
Sbjct: 1143 MPNLKMNLKFDIEVLFKNLGVDMKDISPTSLLKDRKRELEGNPDFSNKDVGVSQAPMVAE 1202

Query: 902  VSAGAISSLSQVEIQPEVATDSHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERL 1081
            V +G IS L+ V++  E A+  + GG  HLLSQY  PL L+SG L++DEK+A+L LS++L
Sbjct: 1203 VKSGIISPLNHVDLSLEGASPPNSGGPTHLLSQYAGPLRLSSGALMEDEKLAALGLSDQL 1262

Query: 1082 PSGQGLTQLTPSQSSFSVSQMPAQIPNIRTQIILNPKLNALGLKIHFQSILPTAMERAIK 1261
            PS QGL Q TPSQS FSVSQ+   IPNI T +I+N KL++LGL +HFQ ++P AM+RAIK
Sbjct: 1263 PSAQGLFQATPSQSPFSVSQLSTSIPNIGTHVIINQKLSSLGLHMHFQRVVPIAMDRAIK 1322

Query: 1262 EIMTPVVQRSVTIAMQSTRELVLKDFEMESDESRIYNAAHLM 1387
            EI+  ++QRSV+IA Q+T+ELVLKD+ MESDE+RIYNAAHLM
Sbjct: 1323 EIVAGIIQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLM 1364