BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00007804
         (648 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010529882.1| PREDICTED: ribonucleoprotein At2g37220, chlo...   298   1e-78
ref|NP_001289491.1| 29 kDa ribonucleoprotein A, chloroplastic [N...   296   5e-78
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   295   1e-77
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr...   291   2e-76
ref|XP_010516981.1| PREDICTED: ribonucleoprotein At2g37220, chlo...   290   7e-76
ref|XP_009596607.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   290   7e-76
ref|XP_010509364.1| PREDICTED: ribonucleoprotein At2g37220, chlo...   289   9e-76
ref|XP_010505299.1| PREDICTED: ribonucleoprotein At2g37220, chlo...   288   1e-75
ref|XP_013738305.1| PREDICTED: RNA-binding protein CP29B, chloro...   288   1e-75
ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   288   2e-75
ref|XP_010312344.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   288   2e-75
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   288   2e-75
ref|XP_013682669.1| PREDICTED: RNA-binding protein CP29B, chloro...   287   3e-75
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   287   3e-75
ref|XP_009133135.1| PREDICTED: ribonucleoprotein At2g37220, chlo...   287   4e-75
ref|XP_013688985.1| PREDICTED: RNA-binding protein CP29B, chloro...   287   4e-75
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps...   287   4e-75
ref|XP_013626566.1| PREDICTED: RNA-binding protein CP29B, chloro...   286   7e-75
ref|XP_009141639.1| PREDICTED: ribonucleoprotein At2g37220, chlo...   286   9e-75
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th...   285   1e-74

>ref|XP_010529882.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
           [Tarenaya hassleriana] gi|729310284|ref|XP_010529883.1|
           PREDICTED: ribonucleoprotein At2g37220,
           chloroplastic-like [Tarenaya hassleriana]
          Length = 299

 Score =  298 bits (764), Expect = 1e-78
 Identities = 152/201 (75%), Positives = 166/201 (82%), Gaps = 7/201 (3%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPFTVDSS LAELF  AGNV++VEVIYDK+TGRSRGFGFVTMSTVEEV++A QQ
Sbjct: 99  KLFVGNLPFTVDSSQLAELFESAGNVQMVEVIYDKITGRSRGFGFVTMSTVEEVESAAQQ 158

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAGGSFDSPSRG------GGSFDSSNRVYV 310
           FNGYE EGRPLRVNSGPPPP+ E SF R PR+  SF     G      G    SSNRVYV
Sbjct: 159 FNGYEYEGRPLRVNSGPPPPRREESFSRGPRSRSSFQGSDSGPRSSFPGSGSGSSNRVYV 218

Query: 309 GNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGV 130
           GNLSWAVDD ALE LF+EQGKV EA+V+YDR+SGRS+GFGFVTY S +EVNNAI SLNG 
Sbjct: 219 GNLSWAVDDMALESLFNEQGKVVEARVIYDRDSGRSKGFGFVTYNSPQEVNNAIRSLNGA 278

Query: 129 DLKGRDIRVSVAEARPPRRQF 67
           DL GR IRVSVAE+RPPRRQF
Sbjct: 279 DLDGRQIRVSVAESRPPRRQF 299



 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 41/101 (40%), Positives = 61/101 (60%)
 Frame = -1

Query: 372 GSFDSPSRGGGSFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGF 193
           G F   +     F    +++VGNL + VD   L +LF   G V   +V+YD+ +GRSRGF
Sbjct: 82  GVFGDDAEEEPGFSPDLKLFVGNLPFTVDSSQLAELFESAGNVQMVEVIYDKITGRSRGF 141

Query: 192 GFVTYTSSEEVNNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
           GFVT ++ EEV +A +  NG + +GR +RV+ +   PPRR+
Sbjct: 142 GFVTMSTVEEVESAAQQFNGYEYEGRPLRVN-SGPPPPRRE 181


>ref|NP_001289491.1| 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana sylvestris]
           gi|698460317|ref|XP_009781507.1| PREDICTED: 29 kDa
           ribonucleoprotein A, chloroplastic [Nicotiana
           sylvestris] gi|12230584|sp|Q08935.1|ROC1_NICSY RecName:
           Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor [Nicotiana sylvestris]
           gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein
           [Nicotiana sylvestris]
          Length = 273

 Score =  296 bits (759), Expect = 5e-78
 Identities = 153/194 (78%), Positives = 167/194 (86%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           K+FVGNLPF+ DS+ LAELF +AGNVE+VEVIYDKLTGRSRGFGFVTMS+ EEV+AA QQ
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSFRAPRAGGSFDSPSRGGGSFDSSNRVYVGNLSWAV 289
           FNGYEL+GR LRVNSGPPP K ENS        SF   SRGGGSFDSSNRVYVGNL+W V
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENS--------SFRGGSRGGGSFDSSNRVYVGNLAWGV 199

Query: 288 DDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGRDI 109
           D  ALE LFSEQGKV +AKVVYDR+SGRSRGFGFVTY+S+EEVNNAIESL+GVDL GR I
Sbjct: 200 DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAI 259

Query: 108 RVSVAEARPPRRQF 67
           RVS AEARPPRRQF
Sbjct: 260 RVSPAEARPPRRQF 273



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 39/90 (43%), Positives = 57/90 (63%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           +F    +++VGNL ++ D  AL +LF   G V   +V+YD+ +GRSRGFGFVT +S EEV
Sbjct: 82  NFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A +  NG +L GR +RV+     PP ++
Sbjct: 142 EAACQQFNGYELDGRALRVN--SGPPPEKR 169


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor [Nicotiana
           plumbaginifolia] gi|19708|emb|CAA46234.1| RNA binding
           protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  295 bits (756), Expect = 1e-77
 Identities = 153/194 (78%), Positives = 168/194 (86%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           K+FVGNL F+ DS+ LAELF +AGNVE+VEVIYDKLTGRSRGFGFVTMS+ EEV+AA QQ
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSFRAPRAGGSFDSPSRGGGSFDSSNRVYVGNLSWAV 289
           FNGYEL+GR LRVNSGPPP K ENS  + R   SF   SRGGGSFDSSNRVYVGNL+W V
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRENS--SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGV 205

Query: 288 DDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGRDI 109
           D  ALE LFSEQGKV +AKVVYDR+SGRSRGFGFVTY+S+EEVNNAIESL+GVDL GR I
Sbjct: 206 DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAI 265

Query: 108 RVSVAEARPPRRQF 67
           RVS AEARPPRRQF
Sbjct: 266 RVSPAEARPPRRQF 279



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 39/90 (43%), Positives = 57/90 (63%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           +F    +++VGNL ++ D  AL +LF   G V   +V+YD+ +GRSRGFGFVT +S EEV
Sbjct: 82  NFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A +  NG +L GR +RV+     PP ++
Sbjct: 142 EAACQQFNGYELDGRALRVN--SGPPPEKR 169


>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|568855826|ref|XP_006481497.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like [Citrus
           sinensis] gi|557530828|gb|ESR42011.1| hypothetical
           protein CICLE_v10012331mg [Citrus clementina]
          Length = 282

 Score =  291 bits (745), Expect = 2e-76
 Identities = 154/195 (78%), Positives = 168/195 (86%), Gaps = 1/195 (0%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF+VDS+ LA LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+VEEV+AA QQ
Sbjct: 95  KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154

Query: 468 FNGYELEGRPLRVNSGPPPP-KDENSFRAPRAGGSFDSPSRGGGSFDSSNRVYVGNLSWA 292
           FNGYELEGRPLRVNSGPPPP ++E S R PR GG+  +PS GG      NRVYVGNLSW 
Sbjct: 155 FNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGA-GAPSSGG------NRVYVGNLSWG 207

Query: 291 VDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGRD 112
           VDD ALE LF EQGKV EAKVVYDRESGRSRGFGFVTY+S+EEV+NAI+SLNGVDL GR 
Sbjct: 208 VDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRA 267

Query: 111 IRVSVAEARPPRRQF 67
           IRVSVAEARP RRQF
Sbjct: 268 IRVSVAEARPQRRQF 282



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
 Frame = -1

Query: 465 NGYELEGRPLRVNSG------PPPPKDENSFRAPRAGGSFDSPS-----RGGGSFDSSNR 319
           + ++L  +P+ ++S       P P       R       FD          G +F    +
Sbjct: 36  SSHKLLAKPISISSSFIHSFQPLPSSPSRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLK 95

Query: 318 VYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESL 139
           ++VGNL ++VD   L  LF   G V   +V+YD+ +GRSRGFGFVT +S EEV  A +  
Sbjct: 96  LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQF 155

Query: 138 NGVDLKGRDIRVSVAEARPPRRQF 67
           NG +L+GR +RV+     P R +F
Sbjct: 156 NGYELEGRPLRVNSGPPPPRREEF 179


>ref|XP_010516981.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic [Camelina
           sativa]
          Length = 291

 Score =  290 bits (741), Expect = 7e-76
 Identities = 147/196 (75%), Positives = 163/196 (83%), Gaps = 2/196 (1%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+V EV+AA QQ
Sbjct: 96  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 155

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAG-GSFDSPSRGGGSFDSSNRVYVGNLSW 295
           FNGYEL+GRPLRVN+GPPPPK E+ F R PR+  G   S   GG S  S NRVYVGNLSW
Sbjct: 156 FNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGGSGSGYGGGSSAGSGNRVYVGNLSW 215

Query: 294 AVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGR 115
            VDD ALE LF+EQGKV EA+V+YDR+SGRS+GFGFVTY SS+EV NAI SLNG DL GR
Sbjct: 216 GVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGR 275

Query: 114 DIRVSVAEARPPRRQF 67
            IRVS AEARPPRRQF
Sbjct: 276 QIRVSEAEARPPRRQF 291



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 41/90 (45%), Positives = 57/90 (63%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           SF +  +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT +S  EV
Sbjct: 90  SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEV 149

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A +  NG +L GR +RV+ A   PP+R+
Sbjct: 150 EAAAQQFNGYELDGRPLRVN-AGPPPPKRE 178


>ref|XP_009596607.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana
           tomentosiformis] gi|697175335|ref|XP_009596608.1|
           PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic
           [Nicotiana tomentosiformis]
          Length = 284

 Score =  290 bits (741), Expect = 7e-76
 Identities = 151/199 (75%), Positives = 169/199 (84%), Gaps = 5/199 (2%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           K+FVGNLPF+ DS+ LAELF +AGNVE+VEVIYDKLTGRSRGFGFVTMS+ EEV+AA QQ
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSFRAPRAGGSFDSPS-----RGGGSFDSSNRVYVGN 304
           FNGYEL+GR LRVN+GPPP + ENS  + R   SF   S     RGGGSFDSSNRVYVGN
Sbjct: 148 FNGYELDGRALRVNAGPPPERRENS--SFRENSSFRENSSFRGGRGGGSFDSSNRVYVGN 205

Query: 303 LSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDL 124
           L+W VD  ALE LFSEQGKV +AKVVYDR+SGRSRGFGFVTY+++EEVNNAIESL+GVDL
Sbjct: 206 LAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSTAEEVNNAIESLDGVDL 265

Query: 123 KGRDIRVSVAEARPPRRQF 67
            GR IRVS AEARPPRRQF
Sbjct: 266 NGRAIRVSPAEARPPRRQF 284



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 40/90 (44%), Positives = 57/90 (63%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           +F    +++VGNL ++ D  AL +LF   G V   +V+YD+ +GRSRGFGFVT +S EEV
Sbjct: 82  NFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A +  NG +L GR +RV+     PP R+
Sbjct: 142 EAACQQFNGYELDGRALRVNAGP--PPERR 169


>ref|XP_010509364.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
           [Camelina sativa]
          Length = 292

 Score =  289 bits (740), Expect = 9e-76
 Identities = 147/196 (75%), Positives = 163/196 (83%), Gaps = 2/196 (1%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+V EV+AA QQ
Sbjct: 97  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 156

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAG-GSFDSPSRGGGSFDSSNRVYVGNLSW 295
           FNGYEL+GRPLRVN+GPPPPK E+ F R PR+  G   S   GG S  S NRVYVGNLSW
Sbjct: 157 FNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGGSGSGYGGGSSGGSGNRVYVGNLSW 216

Query: 294 AVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGR 115
            VDD ALE LF+EQGKV EA+V+YDR+SGRS+GFGFVTY SS+EV NAI SLNG DL GR
Sbjct: 217 GVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGR 276

Query: 114 DIRVSVAEARPPRRQF 67
            IRVS AEARPPRRQF
Sbjct: 277 QIRVSEAEARPPRRQF 292



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 42/96 (43%), Positives = 59/96 (61%)
 Frame = -1

Query: 357 PSRGGGSFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTY 178
           P +   SF +  +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT 
Sbjct: 85  PPQQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTM 144

Query: 177 TSSEEVNNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
           +S  EV  A +  NG +L GR +RV+ A   PP+R+
Sbjct: 145 SSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKRE 179


>ref|XP_010505299.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
           [Camelina sativa]
          Length = 290

 Score =  288 bits (738), Expect = 1e-75
 Identities = 146/196 (74%), Positives = 163/196 (83%), Gaps = 2/196 (1%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+V EV+AA QQ
Sbjct: 95  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 154

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAG-GSFDSPSRGGGSFDSSNRVYVGNLSW 295
           FNGYEL+GRPLRVN+GPPPPK E+ F R PR+  G   S   GG +  S NRVYVGNLSW
Sbjct: 155 FNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGGSGSGYGGGSNAGSGNRVYVGNLSW 214

Query: 294 AVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGR 115
            VDD ALE LF+EQGKV EA+V+YDR+SGRS+GFGFVTY SS+EV NAI SLNG DL GR
Sbjct: 215 GVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGR 274

Query: 114 DIRVSVAEARPPRRQF 67
            IRVS AEARPPRRQF
Sbjct: 275 QIRVSEAEARPPRRQF 290



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 41/90 (45%), Positives = 57/90 (63%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           SF +  +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT +S  EV
Sbjct: 89  SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEV 148

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A +  NG +L GR +RV+ A   PP+R+
Sbjct: 149 EAAAQQFNGYELDGRPLRVN-AGPPPPKRE 177


>ref|XP_013738305.1| PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Brassica
           napus] gi|674954022|emb|CDX79724.1| BnaC03g20600D
           [Brassica napus]
          Length = 291

 Score =  288 bits (738), Expect = 1e-75
 Identities = 148/198 (74%), Positives = 165/198 (83%), Gaps = 4/198 (2%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+V EV+AAEQQ
Sbjct: 94  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAEQQ 153

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAG-GSFDS--PSRGGGSFDSSNRVYVGNL 301
           FNGYEL+GRPLRVN+GPPPPK E+SF R PR+  GS  S     GGG   S NRVYVGNL
Sbjct: 154 FNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGSGYGGGGGGGAGSGNRVYVGNL 213

Query: 300 SWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLK 121
           SW VDD ALE LF EQGKV EA+V+YDR+SGRS+GFGFVTY S++EV NAI +LNG DL 
Sbjct: 214 SWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRTLNGADLD 273

Query: 120 GRDIRVSVAEARPPRRQF 67
           GR IRVS AEARPPRRQF
Sbjct: 274 GRQIRVSEAEARPPRRQF 291



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 51/138 (36%), Positives = 69/138 (50%)
 Frame = -1

Query: 483 AAEQQFNGYELEGRPLRVNSGPPPPKDENSFRAPRAGGSFDSPSRGGGSFDSSNRVYVGN 304
           A    FN  E E   +  +   PPP+ E SF A                     +++VGN
Sbjct: 60  AVTDDFN-VEEEADSIFSDDAAPPPQQEQSFSADL-------------------KLFVGN 99

Query: 303 LSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDL 124
           L + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT +S  EV  A +  NG +L
Sbjct: 100 LPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAEQQFNGYEL 159

Query: 123 KGRDIRVSVAEARPPRRQ 70
            GR +RV+ A   PP+R+
Sbjct: 160 DGRPLRVN-AGPPPPKRE 176


>ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Solanum
           lycopersicum]
          Length = 290

 Score =  288 bits (737), Expect = 2e-75
 Identities = 148/194 (76%), Positives = 167/194 (86%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           K+FVGNLPF+VDS+ LAELF +AG+VE+VEVIYDKLTGRSRGFGFVTMS+ E V+AA QQ
Sbjct: 101 KIFVGNLPFSVDSAYLAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQ 160

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSFRAPRAGGSFDSPSRGGGSFDSSNRVYVGNLSWAV 289
           FNGYE++GR LRVNSGP PPK ENSF     G S     RGGGS DSSNRVYVGNL+W+V
Sbjct: 161 FNGYEIDGRALRVNSGPAPPKRENSF----GGNSSYQGGRGGGSMDSSNRVYVGNLAWSV 216

Query: 288 DDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGRDI 109
           D Q LE LFSEQGKV +AKVVYDR+SGRSRGFGFVTY+S++EVN+AIESL+GVDL GR I
Sbjct: 217 DQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAQEVNDAIESLDGVDLGGRAI 276

Query: 108 RVSVAEARPPRRQF 67
           RVS AEARPPRRQF
Sbjct: 277 RVSPAEARPPRRQF 290


>ref|XP_010312344.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Solanum
           lycopersicum]
          Length = 291

 Score =  288 bits (736), Expect = 2e-75
 Identities = 146/197 (74%), Positives = 167/197 (84%), Gaps = 3/197 (1%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF+VDS+ LAELF +AGNVE+VEVIYDKLTGRSRGFGFVTMS+  EV+AAEQQ
Sbjct: 95  KLFVGNLPFSVDSATLAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQ 154

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSFRAPRAGGSFDSP---SRGGGSFDSSNRVYVGNLS 298
           FNGYE++GR LRVNSGP P K ENSF   R G S +S    +RGG +FDSSNRVYVGNLS
Sbjct: 155 FNGYEIDGRALRVNSGPAPEKRENSFGGGRGGRSENSSYGGARGGRNFDSSNRVYVGNLS 214

Query: 297 WAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKG 118
           W VDD +L +LFS+QGKV + KVVYDR+SGRSRGFGFVT++S++EVN AI+SLNG DL G
Sbjct: 215 WGVDDLSLRELFSDQGKVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDG 274

Query: 117 RDIRVSVAEARPPRRQF 67
           R IRVS AE RPPRRQF
Sbjct: 275 RPIRVSAAEERPPRRQF 291



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 38/90 (42%), Positives = 57/90 (63%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           +F    +++VGNL ++VD   L +LF   G V   +V+YD+ +GRSRGFGFVT +S  EV
Sbjct: 89  NFSPDLKLFVGNLPFSVDSATLAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEV 148

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A +  NG ++ GR +RV+   A P +R+
Sbjct: 149 EAAEQQFNGYEIDGRALRVNSGPA-PEKRE 177


>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
           X2 [Solanum tuberosum]
          Length = 291

 Score =  288 bits (736), Expect = 2e-75
 Identities = 146/197 (74%), Positives = 167/197 (84%), Gaps = 3/197 (1%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF+VDS+ LAELF +AGNVE+VEVIYDKLTGRSRGFGFVTMS+  EV+AAEQQ
Sbjct: 95  KLFVGNLPFSVDSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQ 154

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSFRAPRAGGSFDSP---SRGGGSFDSSNRVYVGNLS 298
           FNGYE++GR LRVNSGP P K ENSF   R G S +S    +RGG +FDSSNRVYVGNLS
Sbjct: 155 FNGYEIDGRALRVNSGPAPEKRENSFGGGRGGRSENSSYGGARGGRNFDSSNRVYVGNLS 214

Query: 297 WAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKG 118
           W VDD +L +LFS+QGKV + KVVYDR+SGRSRGFGFVT++S++EVN AI+SLNG DL G
Sbjct: 215 WGVDDLSLRELFSDQGKVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDG 274

Query: 117 RDIRVSVAEARPPRRQF 67
           R IRVS AE RPPRRQF
Sbjct: 275 RSIRVSAAEERPPRRQF 291



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 39/90 (43%), Positives = 58/90 (64%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           +F    +++VGNL ++VD  AL +LF   G V   +V+YD+ +GRSRGFGFVT +S  EV
Sbjct: 89  NFSPDLKLFVGNLPFSVDSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEV 148

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A +  NG ++ GR +RV+   A P +R+
Sbjct: 149 EAAEQQFNGYEIDGRALRVNSGPA-PEKRE 177


>ref|XP_013682669.1| PREDICTED: RNA-binding protein CP29B, chloroplastic-like isoform X1
           [Brassica napus] gi|923784145|ref|XP_013682670.1|
           PREDICTED: RNA-binding protein CP29B, chloroplastic-like
           isoform X1 [Brassica napus]
           gi|923784151|ref|XP_013682671.1| PREDICTED: RNA-binding
           protein CP29B, chloroplastic-like isoform X2 [Brassica
           napus]
          Length = 290

 Score =  287 bits (735), Expect = 3e-75
 Identities = 145/196 (73%), Positives = 162/196 (82%), Gaps = 2/196 (1%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+  EVQ AEQQ
Sbjct: 95  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVQTAEQQ 154

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAG-GSFDSPSRGGGSFDSSNRVYVGNLSW 295
           FNGYEL+GRPLRVN+GPPPPK E+SF R PR+  GS      GGG   S NRVYVGNLSW
Sbjct: 155 FNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGGGYGGGGGAGSGNRVYVGNLSW 214

Query: 294 AVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGR 115
            VDD ALE LF EQGKV EA+V+YDR+SGRS+GFGFVTY S++EV NAI +L+G DL GR
Sbjct: 215 GVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRTLDGADLDGR 274

Query: 114 DIRVSVAEARPPRRQF 67
            IRVS AEARPPRRQF
Sbjct: 275 QIRVSEAEARPPRRQF 290



 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 44/96 (45%), Positives = 60/96 (62%)
 Frame = -1

Query: 357 PSRGGGSFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTY 178
           P R   SF S  +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT 
Sbjct: 83  PPRREQSFSSDLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTM 142

Query: 177 TSSEEVNNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
           +S+ EV  A +  NG +L GR +RV+ A   PP+R+
Sbjct: 143 SSASEVQTAEQQFNGYELDGRPLRVN-AGPPPPKRE 177


>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Fragaria
           vesca subsp. vesca]
          Length = 277

 Score =  287 bits (735), Expect = 3e-75
 Identities = 145/194 (74%), Positives = 166/194 (85%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPFTVDS+ LAELF  AGNVE+VEVIYDK TGRSRGFGFVTMS+ +EV+AA +Q
Sbjct: 88  KLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKTTGRSRGFGFVTMSSAQEVEAAARQ 147

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSFRAPRAGGSFDSPSRGGGSFDSSNRVYVGNLSWAV 289
           FNGYEL+GR LRVN GPPPP+ E+SFR  R G    SP  GGG  DSSNR+YVGNL+W V
Sbjct: 148 FNGYELDGRALRVNYGPPPPRTEDSFRGARGG----SPRGGGGYGDSSNRLYVGNLAWGV 203

Query: 288 DDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGRDI 109
           D+ ALE+LF+EQGKV EAKVV+DR+SGRSRGFGFVTY S+EE+N+AIESL+GVDL GR I
Sbjct: 204 DNLALENLFNEQGKVLEAKVVFDRDSGRSRGFGFVTYGSAEEMNSAIESLDGVDLGGRSI 263

Query: 108 RVSVAEARPPRRQF 67
           RV+ AE RPPRRQF
Sbjct: 264 RVTAAEPRPPRRQF 277



 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 39/90 (43%), Positives = 56/90 (62%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           +F    +++VGNL + VD   L +LF   G V   +V+YD+ +GRSRGFGFVT +S++EV
Sbjct: 82  NFSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKTTGRSRGFGFVTMSSAQEV 141

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A    NG +L GR +RV+     PPR +
Sbjct: 142 EAAARQFNGYELDGRALRVNYGPP-PPRTE 170


>ref|XP_009133135.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
           [Brassica rapa]
          Length = 291

 Score =  287 bits (734), Expect = 4e-75
 Identities = 146/196 (74%), Positives = 163/196 (83%), Gaps = 2/196 (1%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK TGRSRGFGFVTMS+V EV+AA QQ
Sbjct: 96  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKETGRSRGFGFVTMSSVSEVEAAAQQ 155

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAG-GSFDSPSRGGGSFDSSNRVYVGNLSW 295
           FNGYEL+GRPLRVN+GPPPPK E+SF R PR+  GS  S   GG +  S NRVYVGNLSW
Sbjct: 156 FNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGSGYGGGAAAGSGNRVYVGNLSW 215

Query: 294 AVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGR 115
            VDD ALE LF EQGKV EA+V+YDR+SGRS+GFGFVTY S++EV NAI +LNG DL GR
Sbjct: 216 GVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRTLNGADLDGR 275

Query: 114 DIRVSVAEARPPRRQF 67
            IRVS AEARPPRRQF
Sbjct: 276 QIRVSEAEARPPRRQF 291



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 43/96 (44%), Positives = 60/96 (62%)
 Frame = -1

Query: 357 PSRGGGSFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTY 178
           P +   SF +  +++VGNL + VD   L  LF   G V   +V+YD+E+GRSRGFGFVT 
Sbjct: 84  PPQQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKETGRSRGFGFVTM 143

Query: 177 TSSEEVNNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
           +S  EV  A +  NG +L GR +RV+ A   PP+R+
Sbjct: 144 SSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKRE 178


>ref|XP_013688985.1| PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Brassica
           napus] gi|674885816|emb|CDY46764.1| BnaA03g17080D
           [Brassica napus]
          Length = 291

 Score =  287 bits (734), Expect = 4e-75
 Identities = 146/196 (74%), Positives = 163/196 (83%), Gaps = 2/196 (1%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK TGRSRGFGFVTMS+V EV+AA QQ
Sbjct: 96  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKETGRSRGFGFVTMSSVSEVEAAAQQ 155

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAG-GSFDSPSRGGGSFDSSNRVYVGNLSW 295
           FNGYEL+GRPLRVN+GPPPPK E+SF R PR+  GS  S   GG +  S NRVYVGNLSW
Sbjct: 156 FNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGSGYGGGAAAGSGNRVYVGNLSW 215

Query: 294 AVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGR 115
            VDD ALE LF EQGKV EA+V+YDR+SGRS+GFGFVTY S++EV NAI +LNG DL GR
Sbjct: 216 GVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRTLNGADLDGR 275

Query: 114 DIRVSVAEARPPRRQF 67
            IRVS AEARPPRRQF
Sbjct: 276 QIRVSEAEARPPRRQF 291



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 43/96 (44%), Positives = 60/96 (62%)
 Frame = -1

Query: 357 PSRGGGSFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTY 178
           P +   SF +  +++VGNL + VD   L  LF   G V   +V+YD+E+GRSRGFGFVT 
Sbjct: 84  PPQQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKETGRSRGFGFVTM 143

Query: 177 TSSEEVNNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
           +S  EV  A +  NG +L GR +RV+ A   PP+R+
Sbjct: 144 SSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKRE 178


>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
           gi|482563453|gb|EOA27643.1| hypothetical protein
           CARUB_v10023790mg [Capsella rubella]
          Length = 284

 Score =  287 bits (734), Expect = 4e-75
 Identities = 147/196 (75%), Positives = 163/196 (83%), Gaps = 2/196 (1%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+  EV+AA QQ
Sbjct: 91  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVEAAAQQ 150

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAGGSFDSPSRGGGS-FDSSNRVYVGNLSW 295
           FNGYEL+GRPLRVN+GPPPPK E+ F R PR+  SF     GGGS   S NRVYVGNLSW
Sbjct: 151 FNGYELDGRPLRVNAGPPPPKREDGFSRGPRS--SFGGSGYGGGSGAGSGNRVYVGNLSW 208

Query: 294 AVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGR 115
            VDD ALE LF+EQGKV EA+V+YDR+SGRS+GFGFVTY SS+EV NAI SLNG DL GR
Sbjct: 209 GVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGR 268

Query: 114 DIRVSVAEARPPRRQF 67
            IRVS AEARPPRRQF
Sbjct: 269 QIRVSEAEARPPRRQF 284



 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 41/90 (45%), Positives = 58/90 (64%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           SF +  +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT +S+ EV
Sbjct: 85  SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEV 144

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A +  NG +L GR +RV+ A   PP+R+
Sbjct: 145 EAAAQQFNGYELDGRPLRVN-AGPPPPKRE 173


>ref|XP_013626566.1| PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Brassica
           oleracea var. oleracea]
          Length = 291

 Score =  286 bits (732), Expect = 7e-75
 Identities = 147/198 (74%), Positives = 164/198 (82%), Gaps = 4/198 (2%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+V EV+AAEQQ
Sbjct: 94  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAEQQ 153

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAG-GSFDSP--SRGGGSFDSSNRVYVGNL 301
           F GYEL+GRPLRVN+GPPPPK E+SF R PR+  GS  S     GGG   S NRVYVGNL
Sbjct: 154 FKGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGSGYGGGGGGGAGSGNRVYVGNL 213

Query: 300 SWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLK 121
           SW VDD ALE LF EQGKV EA+V+YDR+SGRS+GFGFVTY S++EV NAI +LNG DL 
Sbjct: 214 SWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRTLNGADLD 273

Query: 120 GRDIRVSVAEARPPRRQF 67
           GR IRVS AEARPPRRQF
Sbjct: 274 GRQIRVSEAEARPPRRQF 291



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 50/138 (36%), Positives = 68/138 (49%)
 Frame = -1

Query: 483 AAEQQFNGYELEGRPLRVNSGPPPPKDENSFRAPRAGGSFDSPSRGGGSFDSSNRVYVGN 304
           A    FN  E E   +  +   PPP+ E SF A                     +++VGN
Sbjct: 60  AVTDDFN-VEEEADSIFSDDAAPPPQQEQSFSADL-------------------KLFVGN 99

Query: 303 LSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDL 124
           L + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT +S  EV  A +   G +L
Sbjct: 100 LPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAEQQFKGYEL 159

Query: 123 KGRDIRVSVAEARPPRRQ 70
            GR +RV+ A   PP+R+
Sbjct: 160 DGRPLRVN-AGPPPPKRE 176


>ref|XP_009141639.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
           [Brassica rapa]
          Length = 288

 Score =  286 bits (731), Expect = 9e-75
 Identities = 144/195 (73%), Positives = 161/195 (82%), Gaps = 1/195 (0%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+  EVQ AEQQ
Sbjct: 95  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVQTAEQQ 154

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRAGGSFDSPSRGGGSFDSSNRVYVGNLSWA 292
           FNGYEL+GRPLRVN+GPPPPK E+SF R PR+     S   GGG   S NRVYVGNLSW 
Sbjct: 155 FNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFG-SSGGGGGGGAGSGNRVYVGNLSWG 213

Query: 291 VDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLKGRD 112
           VDD ALE LF EQGKV EA+V+YDR+SGRS+GFGFVTY S++EV NAI +L+G DL GR 
Sbjct: 214 VDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRTLDGADLDGRQ 273

Query: 111 IRVSVAEARPPRRQF 67
           IRVS AEARPPRRQF
Sbjct: 274 IRVSEAEARPPRRQF 288



 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 44/96 (45%), Positives = 60/96 (62%)
 Frame = -1

Query: 357 PSRGGGSFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTY 178
           P R   SF S  +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT 
Sbjct: 83  PPRREQSFSSDLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTM 142

Query: 177 TSSEEVNNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
           +S+ EV  A +  NG +L GR +RV+ A   PP+R+
Sbjct: 143 SSASEVQTAEQQFNGYELDGRPLRVN-AGPPPPKRE 177


>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|CP29B_ARATH RecName:
           Full=RNA-binding protein CP29B, chloroplastic; AltName:
           Full=Ribonucleoprotein At2g37220; Flags: Precursor
           gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| chloroplast RNA binding
           protein [Arabidopsis thaliana]
          Length = 289

 Score =  285 bits (730), Expect = 1e-74
 Identities = 147/198 (74%), Positives = 165/198 (83%), Gaps = 4/198 (2%)
 Frame = -1

Query: 648 KLFVGNLPFTVDSSDLAELFGQAGNVEVVEVIYDKLTGRSRGFGFVTMSTVEEVQAAEQQ 469
           KLFVGNLPF VDS+ LA+LF  AGNVE+VEVIYDK+TGRSRGFGFVTMS+V EV+AA QQ
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query: 468 FNGYELEGRPLRVNSGPPPPKDENSF-RAPRA--GGSFDSPSRGGGS-FDSSNRVYVGNL 301
           FNGYEL+GRPLRVN+GPPPPK E+ F R PR+  G S      GGGS   S NRVYVGNL
Sbjct: 152 FNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNL 211

Query: 300 SWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEVNNAIESLNGVDLK 121
           SW VDD ALE LFSEQGKV EA+V+YDR+SGRS+GFGFVTY SS+EV NAI+SL+G DL 
Sbjct: 212 SWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLD 271

Query: 120 GRDIRVSVAEARPPRRQF 67
           GR IRVS AEARPPRRQ+
Sbjct: 272 GRQIRVSEAEARPPRRQY 289



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 41/90 (45%), Positives = 57/90 (63%)
 Frame = -1

Query: 339 SFDSSNRVYVGNLSWAVDDQALEDLFSEQGKVTEAKVVYDRESGRSRGFGFVTYTSSEEV 160
           SF +  +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT +S  EV
Sbjct: 86  SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEV 145

Query: 159 NNAIESLNGVDLKGRDIRVSVAEARPPRRQ 70
             A +  NG +L GR +RV+ A   PP+R+
Sbjct: 146 EAAAQQFNGYELDGRPLRVN-AGPPPPKRE 174