BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00007577
         (2778 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010247733.1| PREDICTED: uncharacterized protein DDB_G0274...   306   6e-93
ref|XP_010247727.1| PREDICTED: uncharacterized protein DDB_G0274...   293   3e-89
ref|XP_010240840.1| PREDICTED: uncharacterized protein DDB_G0274...   291   4e-86
ref|XP_011038043.1| PREDICTED: nuclear pore complex protein NUP9...   305   1e-85
ref|XP_006370735.1| hypothetical protein POPTR_0001s45750g [Popu...   300   6e-84
ref|XP_006370736.1| hypothetical protein POPTR_0001s45750g [Popu...   300   6e-84
ref|XP_006370737.1| hypothetical protein POPTR_0001s45750g [Popu...   300   6e-84
ref|XP_012470341.1| PREDICTED: nuclear pore complex protein NUP9...   315   1e-82
gb|KJB39538.1| hypothetical protein B456_007G018500 [Gossypium r...   313   5e-82
gb|KJB39535.1| hypothetical protein B456_007G018500 [Gossypium r...   313   5e-82
ref|XP_011038039.1| PREDICTED: nuclear pore complex protein NUP9...   293   5e-82
ref|XP_011038041.1| PREDICTED: nuclear pore complex protein NUP9...   293   5e-82
ref|XP_010660457.1| PREDICTED: nuclear pore complex protein NUP9...   312   9e-82
emb|CBI34639.3| unnamed protein product [Vitis vinifera]              312   9e-82
ref|XP_011004364.1| PREDICTED: nuclear pore complex protein NUP9...   311   2e-81
gb|KJB18865.1| hypothetical protein B456_003G072900 [Gossypium r...   311   2e-81
gb|KJB39542.1| hypothetical protein B456_007G018500 [Gossypium r...   309   1e-80
gb|KJB39539.1| hypothetical protein B456_007G018500 [Gossypium r...   309   1e-80
ref|XP_007039293.1| Nucleoporin autopeptidase, putative [Theobro...   308   1e-80
ref|XP_012474745.1| PREDICTED: nuclear pore complex protein NUP9...   308   2e-80

>ref|XP_010247733.1| PREDICTED: uncharacterized protein DDB_G0274915-like isoform X3
            [Nelumbo nucifera]
          Length = 988

 Score =  306 bits (783), Expect(2) = 6e-93
 Identities = 166/279 (59%), Positives = 201/279 (72%), Gaps = 7/279 (2%)
 Frame = +3

Query: 1962 GAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----FGTLPAMPQ 2129
            GAFSF NFGQ QTA++                                   FGTLPAMPQ
Sbjct: 589  GAFSFGNFGQAQTAASSGFGGVSNIFGQSTFGQSSATQSTAVVQPAPVANPFGTLPAMPQ 648

Query: 2130 MSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKV 2306
            +SIG SGS P++QYGISSMPVT+KP P+RVSSL TSRH+SQRR     RKYHPK+DGPKV
Sbjct: 649  ISIGHSGSAPSIQYGISSMPVTDKPAPVRVSSL-TSRHLSQRRIRLPARKYHPKSDGPKV 707

Query: 2307 PFYYDDEAPSN-PKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVHKNDC 2480
            PF+ DDE  S  PKADALFIPRENPR+LVI   ++WPS+ SLEK S LK+ + PVH+N  
Sbjct: 708  PFFSDDEEVSGTPKADALFIPRENPRALVIRSTDQWPSRTSLEKSSLLKEANGPVHENGN 767

Query: 2481 LAENGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASVHEHGTEIESVL 2660
            LAENG+ + +I+     Q+ NG+H D ST+K +SYIT  GHR+G+AA V+EHG +IE+++
Sbjct: 768  LAENGAVKVKIN-----QKPNGLH-DNSTEKGESYITLAGHRAGEAAIVYEHGADIEALM 821

Query: 2661 PKLKHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            PKL+H+DYYTEP+IQELAAKERAEPGFCR VK FVVGRH
Sbjct: 822  PKLRHSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRH 860



 Score = 66.2 bits (160), Expect(2) = 6e-93
 Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAF---NTQSAGLFQSTTPSLGQTTSPFGQTSSAFGQST-PSFGQTNM 1884
            +S  GTTS F S     NTQS+ LFQSTTPS+GQT+S FGQT+S FGQST  SFGQ ++
Sbjct: 490  SSVPGTTSTFGSGLTFGNTQSSPLFQSTTPSIGQTSSAFGQTTSTFGQSTISSFGQPSI 548



 Score =  193 bits (491), Expect = 6e-46
 Identities = 92/125 (73%), Positives = 102/125 (81%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFG T SPFGAQSS FG+Q  TP+FG +AFGQS FG QRGGSRV  Y+PT EVDGG+
Sbjct: 270  GSSPFGATTSPFGAQSSPFGAQTTTPTFGGTAFGQSAFGAQRGGSRVTPYTPTGEVDGGT 329

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
             TQPAGKLESISAM  YK+KSHEELRWEDYQLGDKGGPNPA QP    GFG+P +Q +PF
Sbjct: 330  GTQPAGKLESISAMPTYKDKSHEELRWEDYQLGDKGGPNPAGQPTGAIGFGSPTSQPSPF 389

Query: 1357 GGTNT 1371
            G + T
Sbjct: 390  GASPT 394



 Score =  128 bits (321), Expect = 3e-26
 Identities = 61/78 (78%), Positives = 71/78 (91%), Gaps = 1/78 (1%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTS 666
           QKPAFGGFGSTP+ +SPFG+ FQQTQ AFGS+LFGSS+PFGASSQPAFG+TS PAFG TS
Sbjct: 98  QKPAFGGFGSTPTLSSPFGSAFQQTQPAFGSSLFGSSSPFGASSQPAFGATSTPAFGATS 157

Query: 667 TPAFGATSQP-FGATSTP 717
           +PAFGAT+ P FG+T+TP
Sbjct: 158 SPAFGATTTPAFGSTTTP 175


>ref|XP_010247727.1| PREDICTED: uncharacterized protein DDB_G0274915-like isoform X1
            [Nelumbo nucifera] gi|720098747|ref|XP_010247728.1|
            PREDICTED: uncharacterized protein DDB_G0274915-like
            isoform X1 [Nelumbo nucifera]
            gi|720098751|ref|XP_010247730.1| PREDICTED:
            uncharacterized protein DDB_G0274915-like isoform X1
            [Nelumbo nucifera] gi|720098754|ref|XP_010247731.1|
            PREDICTED: uncharacterized protein DDB_G0274915-like
            isoform X1 [Nelumbo nucifera]
          Length = 1009

 Score =  293 bits (751), Expect(2) = 3e-89
 Identities = 166/300 (55%), Positives = 201/300 (67%), Gaps = 28/300 (9%)
 Frame = +3

Query: 1962 GAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----FGTLPAMPQ 2129
            GAFSF NFGQ QTA++                                   FGTLPAMPQ
Sbjct: 589  GAFSFGNFGQAQTAASSGFGGVSNIFGQSTFGQSSATQSTAVVQPAPVANPFGTLPAMPQ 648

Query: 2130 MSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKV 2306
            +SIG SGS P++QYGISSMPVT+KP P+RVSSL TSRH+SQRR     RKYHPK+DGPKV
Sbjct: 649  ISIGHSGSAPSIQYGISSMPVTDKPAPVRVSSL-TSRHLSQRRIRLPARKYHPKSDGPKV 707

Query: 2307 PFYYDDEAPSN-PKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVHKNDC 2480
            PF+ DDE  S  PKADALFIPRENPR+LVI   ++WPS+ SLEK S LK+ + PVH+N  
Sbjct: 708  PFFSDDEEVSGTPKADALFIPRENPRALVIRSTDQWPSRTSLEKSSLLKEANGPVHENGK 767

Query: 2481 ---------------------LAENGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQN 2597
                                 LAENG+ + +I+     Q+ NG+H D ST+K +SYIT  
Sbjct: 768  ASAEVSAPFTNGFISQDKDRNLAENGAVKVKIN-----QKPNGLH-DNSTEKGESYITLA 821

Query: 2598 GHRSGDAASVHEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            GHR+G+AA V+EHG +IE+++PKL+H+DYYTEP+IQELAAKERAEPGFCR VK FVVGRH
Sbjct: 822  GHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRH 881



 Score = 66.2 bits (160), Expect(2) = 3e-89
 Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAF---NTQSAGLFQSTTPSLGQTTSPFGQTSSAFGQST-PSFGQTNM 1884
            +S  GTTS F S     NTQS+ LFQSTTPS+GQT+S FGQT+S FGQST  SFGQ ++
Sbjct: 490  SSVPGTTSTFGSGLTFGNTQSSPLFQSTTPSIGQTSSAFGQTTSTFGQSTISSFGQPSI 548



 Score =  193 bits (491), Expect = 6e-46
 Identities = 92/125 (73%), Positives = 102/125 (81%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFG T SPFGAQSS FG+Q  TP+FG +AFGQS FG QRGGSRV  Y+PT EVDGG+
Sbjct: 270  GSSPFGATTSPFGAQSSPFGAQTTTPTFGGTAFGQSAFGAQRGGSRVTPYTPTGEVDGGT 329

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
             TQPAGKLESISAM  YK+KSHEELRWEDYQLGDKGGPNPA QP    GFG+P +Q +PF
Sbjct: 330  GTQPAGKLESISAMPTYKDKSHEELRWEDYQLGDKGGPNPAGQPTGAIGFGSPTSQPSPF 389

Query: 1357 GGTNT 1371
            G + T
Sbjct: 390  GASPT 394



 Score =  128 bits (321), Expect = 3e-26
 Identities = 61/78 (78%), Positives = 71/78 (91%), Gaps = 1/78 (1%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTS 666
           QKPAFGGFGSTP+ +SPFG+ FQQTQ AFGS+LFGSS+PFGASSQPAFG+TS PAFG TS
Sbjct: 98  QKPAFGGFGSTPTLSSPFGSAFQQTQPAFGSSLFGSSSPFGASSQPAFGATSTPAFGATS 157

Query: 667 TPAFGATSQP-FGATSTP 717
           +PAFGAT+ P FG+T+TP
Sbjct: 158 SPAFGATTTPAFGSTTTP 175


>ref|XP_010240840.1| PREDICTED: uncharacterized protein DDB_G0274915-like isoform X3
            [Nelumbo nucifera]
          Length = 982

 Score =  291 bits (746), Expect(2) = 4e-86
 Identities = 158/301 (52%), Positives = 199/301 (66%), Gaps = 29/301 (9%)
 Frame = +3

Query: 1962 GAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----FGTLPAMPQ 2129
            GAFSF +FGQTQTA++                                   FGTLPAMPQ
Sbjct: 559  GAFSFGSFGQTQTAASSGFGGASSIFGQGTFGQSSATQSTAAVQPAPVSNPFGTLPAMPQ 618

Query: 2130 MSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKV 2306
            +SIG SGS P++QYGISS+PV +KP P+RVSSLLTSRH+SQRR     RKYHPK+DGPKV
Sbjct: 619  VSIGCSGSAPSIQYGISSIPVADKPTPVRVSSLLTSRHLSQRRIRLPARKYHPKSDGPKV 678

Query: 2307 PFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVH---- 2468
            PF+ DDE  P  PKADALFIPRENPR+LVI P ++WPS+ S+EK S LK+ +  +H    
Sbjct: 679  PFFGDDEEVPGTPKADALFIPRENPRALVIRPTDQWPSRTSIEKLSLLKEANGSLHEENG 738

Query: 2469 ------------------KNDCLAENGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQ 2594
                              K+   AENG+ + +I+     Q+ NG H+D + ++ +SYIT 
Sbjct: 739  KASGEVSAPSTNGFISQDKDKNFAENGAVKVKIN-----QKPNGSHDDNNIERGESYITL 793

Query: 2595 NGHRSGDAASVHEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGR 2774
             GHR+G+AA V+EHG +IE+++PKL+H DYYTEP+IQELAAKERAEPGFCR VK FV+GR
Sbjct: 794  TGHRAGEAAIVYEHGADIEALMPKLRHFDYYTEPRIQELAAKERAEPGFCRRVKDFVIGR 853

Query: 2775 H 2777
            H
Sbjct: 854  H 854



 Score = 57.8 bits (138), Expect(2) = 4e-86
 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
 Frame = +1

Query: 1723 SASGTTSPFPSAF---NTQSAGLFQSTTPSLGQTTSPFGQTSSAFGQS-TPSFGQTNM 1884
            S  GTTS F S     NTQ + LFQSTTP +GQT+S FGQT++ FGQS TPSF Q ++
Sbjct: 462  SVPGTTSTFGSGLTFGNTQPSSLFQSTTPPIGQTSSTFGQTTT-FGQSTTPSFSQPSI 518



 Score =  196 bits (497), Expect = 1e-46
 Identities = 93/125 (74%), Positives = 103/125 (82%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGTT SPFGAQSS FG+Q  TP+FG + FGQS FG QRGGSR   Y+PTAEVDGG+
Sbjct: 245  GSSPFGTTASPFGAQSSPFGAQTTTPTFGGTTFGQSAFGAQRGGSRATPYTPTAEVDGGT 304

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
             TQPAGKLESISAM  YK+KSHEELRWEDYQLGDKGGPNPATQP    GFG+P +Q +PF
Sbjct: 305  GTQPAGKLESISAMPSYKDKSHEELRWEDYQLGDKGGPNPATQPTSAIGFGSPTSQPSPF 364

Query: 1357 GGTNT 1371
            G + T
Sbjct: 365  GASPT 369



 Score =  130 bits (327), Expect = 7e-27
 Identities = 63/77 (81%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTS 666
           QKPAFGGFGSTP+Q+SPFG+TFQQTQ AFGS+LFGSS+PFGASSQPAFG+TS PAFG TS
Sbjct: 105 QKPAFGGFGSTPTQSSPFGSTFQQTQPAFGSSLFGSSSPFGASSQPAFGATSNPAFGATS 164

Query: 667 TPAFGATSQP-FGATST 714
           +PAFGATS P FG+T+T
Sbjct: 165 SPAFGATSTPAFGSTTT 181



 Score = 64.7 bits (156), Expect = 4e-07
 Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 23/98 (23%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFGSN-LFGSSAP--FGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S    TF  T +AFGS   FG+S+   FG SS PAFG++S+PAFG +
Sbjct: 166 PAFGAT-STPAFGSTTTTTFGSTGTAFGSGGAFGTSSTPAFGTSSTPAFGASSSPAFGAS 224

Query: 664 STPA--------------------FGATSQPFGATSTP 717
           STP+                    FG T+ PFGA S+P
Sbjct: 225 STPSFSFGSSPAFGQSASAFGSSPFGTTASPFGAQSSP 262


>ref|XP_011038043.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X4
            [Populus euphratica]
          Length = 1008

 Score =  305 bits (780), Expect(2) = 1e-85
 Identities = 159/287 (55%), Positives = 201/287 (70%), Gaps = 2/287 (0%)
 Frame = +3

Query: 1923 FNTIIASXXXXXAGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2102
            FN +  S     AG F+ N F QTQ A N                               
Sbjct: 589  FNQMTPSQPAQNAGIFALN-FSQTQAAGNSGYAGVSSNFGQPFTTQNAVAVQPVPITNP- 646

Query: 2103 FGTLPAMPQMSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKY 2279
            FGTLPAMPQ+S GR+G+ P+VQYGIS+MPV EKP+PIR+SSLLTSRH+SQRR     RKY
Sbjct: 647  FGTLPAMPQVSFGRAGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQRRIRLPMRKY 706

Query: 2280 HPKNDGPKVPFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDT 2456
            +PK+DGPKVPF+ D+E  PS PKADALFIPRENPR+LVI P ++WPS+   EK S L  +
Sbjct: 707  YPKHDGPKVPFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSREIAEKASPLNAS 766

Query: 2457 DPVHKNDCLAENGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASVHEH 2636
             PVH+N+  AENG  +E++ +    Q+ NGVHED +T + +SY+T +GHR+G+AA V+EH
Sbjct: 767  APVHENENSAENGVIKEQVKV---NQKPNGVHEDHATLREESYMTLSGHRAGEAAIVYEH 823

Query: 2637 GTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            G +IE+++PKL+ +DY+TEP+IQELAAKERA PGFCRHVK FVVGRH
Sbjct: 824  GADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHVKDFVVGRH 870



 Score = 42.7 bits (99), Expect(2) = 1e-85
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAF--NTQSAGLFQSTTPSLGQTT-----SPFGQTSSAFGQSTPSFG 1872
            T+  G  SPF S    NTQS+  F STTPS+GQTT     +PFG ++++   S+P+ G
Sbjct: 515  TTGQGNASPFGSNMFNNTQSSLSFPSTTPSMGQTTAFPQSNPFGPSTTSSLFSSPATG 572



 Score =  136 bits (343), Expect = 9e-29
 Identities = 71/120 (59%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFG+T S F AQ S FG+Q  T +FG++ F Q  FGG R G+R A Y+ TAE +GG+
Sbjct: 317  GSSPFGSTTSTFPAQPSPFGAQPTTSAFGNTGFAQPGFGGHRPGTRAAPYAETAEAEGGA 376

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQP---AGFGTPAAQSNPF 1356
                AGKL SISAM  YK+KSHEELRWEDYQLGDKGGP P  Q    AG+     Q+NPF
Sbjct: 377  Q---AGKLVSISAMPAYKDKSHEELRWEDYQLGDKGGPLPPGQSPGGAGYSMSTPQANPF 433



 Score = 85.5 bits (210), Expect = 2e-13
 Identities = 46/72 (63%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
 Frame = +1

Query: 505 GFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTSTPAFGA 684
           GFGST +Q SPFGNT QQ Q  FG+N    S PFGA SQ AFG+ S PAFG T+ PAFGA
Sbjct: 134 GFGST-TQTSPFGNTNQQPQPGFGNNSLFGSTPFGAPSQSAFGAASTPAFGTTTAPAFGA 192

Query: 685 TS--QPFGATST 714
           TS    FG+TST
Sbjct: 193 TSTTPAFGSTST 204


>ref|XP_006370735.1| hypothetical protein POPTR_0001s45750g [Populus trichocarpa]
            gi|550349966|gb|ERP67304.1| hypothetical protein
            POPTR_0001s45750g [Populus trichocarpa]
          Length = 1062

 Score =  300 bits (768), Expect(2) = 6e-84
 Identities = 164/308 (53%), Positives = 202/308 (65%), Gaps = 23/308 (7%)
 Frame = +3

Query: 1923 FNTIIASXXXXXAGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2102
            FN +  S     AG FS N F QTQ A N                               
Sbjct: 621  FNQMTPSQPAQNAGIFSLN-FSQTQAAGNSGFAGVSSNFGQPFTTQNAVAVQPVPITNP- 678

Query: 2103 FGTLPAMPQMSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKY 2279
            FGTLPAMPQ+S GR+G+ P+VQYGIS+MPV EKP+PIR+SSLLTSRH+SQRR     RKY
Sbjct: 679  FGTLPAMPQVSFGRAGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQRRIRLPMRKY 738

Query: 2280 HPKNDGPKVPFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDT 2456
            +PK+DGPKVPF+ D+E  PS PKADALFIPRENPR+LVI P ++WPS+ S EK S L  +
Sbjct: 739  YPKHDGPKVPFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSRESAEKASPLNAS 798

Query: 2457 DPVH---------------------KNDCLAENGSDRERIHLAEDKQRANGVHEDKSTQK 2573
             PVH                     KN   AENG  +E++ +    Q+ NGVHED +TQK
Sbjct: 799  APVHENGKFSVSEDACPSNGSTAGDKNKNSAENGVIKEQVKV---NQKPNGVHEDHATQK 855

Query: 2574 PDSYITQNGHRSGDAASVHEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHV 2753
             +SY+T +GHR+G+AA V+EHG +IE+++PKL+ +DY+TEP+IQELAAKERA PGFCRHV
Sbjct: 856  EESYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHV 915

Query: 2754 KGFVVGRH 2777
            K FVVGRH
Sbjct: 916  KDFVVGRH 923



 Score = 42.0 bits (97), Expect(2) = 6e-84
 Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAF--NTQSAGLFQSTTPSLGQTTSPFGQTSSAFGQSTPS 1866
            T+  G  SPF S    NTQS+  F STTPS+GQTT+ F Q S+ FG ST S
Sbjct: 547  TTGQGNASPFGSNMFNNTQSSLSFPSTTPSMGQTTA-FPQ-SNPFGPSTTS 595



 Score =  136 bits (343), Expect = 9e-29
 Identities = 71/120 (59%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFG+T S F AQ S FG+Q  T +FG++ F Q  FGG R G+R A Y+ TAE +GG+
Sbjct: 349  GSSPFGSTTSTFPAQPSPFGAQPTTSAFGNTGFAQPGFGGHRPGTRAAPYAETAEAEGGA 408

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQP---AGFGTPAAQSNPF 1356
                AGKL SISAM  YK+KSHEELRWEDYQLGDKGGP P  Q    AG+     Q+NPF
Sbjct: 409  Q---AGKLVSISAMPAYKDKSHEELRWEDYQLGDKGGPLPPGQSPGGAGYSMSTPQANPF 465



 Score = 79.0 bits (193), Expect = 2e-11
 Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
 Frame = +1

Query: 490 KPAFGG------FGSTPSQASP-FGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAP 648
           +P FG       FG+T  Q  P FGNT QQ Q  FG+N    S PFGA SQ AFG+ S P
Sbjct: 162 QPGFGSTTQTSPFGNTNQQPQPGFGNTNQQPQPGFGNNSLFGSTPFGAPSQSAFGAASTP 221

Query: 649 AFGMTSTPAFGATS--QPFGATST 714
           AFG T+ PAFG+TS    FG+TST
Sbjct: 222 AFGTTTAPAFGSTSTTPAFGSTST 245


>ref|XP_006370736.1| hypothetical protein POPTR_0001s45750g [Populus trichocarpa]
            gi|550349967|gb|ERP67305.1| hypothetical protein
            POPTR_0001s45750g [Populus trichocarpa]
          Length = 1052

 Score =  300 bits (768), Expect(2) = 6e-84
 Identities = 164/308 (53%), Positives = 202/308 (65%), Gaps = 23/308 (7%)
 Frame = +3

Query: 1923 FNTIIASXXXXXAGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2102
            FN +  S     AG FS N F QTQ A N                               
Sbjct: 611  FNQMTPSQPAQNAGIFSLN-FSQTQAAGNSGFAGVSSNFGQPFTTQNAVAVQPVPITNP- 668

Query: 2103 FGTLPAMPQMSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKY 2279
            FGTLPAMPQ+S GR+G+ P+VQYGIS+MPV EKP+PIR+SSLLTSRH+SQRR     RKY
Sbjct: 669  FGTLPAMPQVSFGRAGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQRRIRLPMRKY 728

Query: 2280 HPKNDGPKVPFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDT 2456
            +PK+DGPKVPF+ D+E  PS PKADALFIPRENPR+LVI P ++WPS+ S EK S L  +
Sbjct: 729  YPKHDGPKVPFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSRESAEKASPLNAS 788

Query: 2457 DPVH---------------------KNDCLAENGSDRERIHLAEDKQRANGVHEDKSTQK 2573
             PVH                     KN   AENG  +E++ +    Q+ NGVHED +TQK
Sbjct: 789  APVHENGKFSVSEDACPSNGSTAGDKNKNSAENGVIKEQVKV---NQKPNGVHEDHATQK 845

Query: 2574 PDSYITQNGHRSGDAASVHEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHV 2753
             +SY+T +GHR+G+AA V+EHG +IE+++PKL+ +DY+TEP+IQELAAKERA PGFCRHV
Sbjct: 846  EESYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHV 905

Query: 2754 KGFVVGRH 2777
            K FVVGRH
Sbjct: 906  KDFVVGRH 913



 Score = 42.0 bits (97), Expect(2) = 6e-84
 Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAF--NTQSAGLFQSTTPSLGQTTSPFGQTSSAFGQSTPS 1866
            T+  G  SPF S    NTQS+  F STTPS+GQTT+ F Q S+ FG ST S
Sbjct: 537  TTGQGNASPFGSNMFNNTQSSLSFPSTTPSMGQTTA-FPQ-SNPFGPSTTS 585



 Score =  136 bits (343), Expect = 9e-29
 Identities = 71/120 (59%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFG+T S F AQ S FG+Q  T +FG++ F Q  FGG R G+R A Y+ TAE +GG+
Sbjct: 339  GSSPFGSTTSTFPAQPSPFGAQPTTSAFGNTGFAQPGFGGHRPGTRAAPYAETAEAEGGA 398

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQP---AGFGTPAAQSNPF 1356
                AGKL SISAM  YK+KSHEELRWEDYQLGDKGGP P  Q    AG+     Q+NPF
Sbjct: 399  Q---AGKLVSISAMPAYKDKSHEELRWEDYQLGDKGGPLPPGQSPGGAGYSMSTPQANPF 455



 Score = 79.0 bits (193), Expect = 2e-11
 Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
 Frame = +1

Query: 490 KPAFGG------FGSTPSQASP-FGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAP 648
           +P FG       FG+T  Q  P FGNT QQ Q  FG+N    S PFGA SQ AFG+ S P
Sbjct: 152 QPGFGSTTQTSPFGNTNQQPQPGFGNTNQQPQPGFGNNSLFGSTPFGAPSQSAFGAASTP 211

Query: 649 AFGMTSTPAFGATS--QPFGATST 714
           AFG T+ PAFG+TS    FG+TST
Sbjct: 212 AFGTTTAPAFGSTSTTPAFGSTST 235


>ref|XP_006370737.1| hypothetical protein POPTR_0001s45750g [Populus trichocarpa]
            gi|550349968|gb|ERP67306.1| hypothetical protein
            POPTR_0001s45750g [Populus trichocarpa]
          Length = 1051

 Score =  300 bits (768), Expect(2) = 6e-84
 Identities = 164/308 (53%), Positives = 202/308 (65%), Gaps = 23/308 (7%)
 Frame = +3

Query: 1923 FNTIIASXXXXXAGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2102
            FN +  S     AG FS N F QTQ A N                               
Sbjct: 610  FNQMTPSQPAQNAGIFSLN-FSQTQAAGNSGFAGVSSNFGQPFTTQNAVAVQPVPITNP- 667

Query: 2103 FGTLPAMPQMSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKY 2279
            FGTLPAMPQ+S GR+G+ P+VQYGIS+MPV EKP+PIR+SSLLTSRH+SQRR     RKY
Sbjct: 668  FGTLPAMPQVSFGRAGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQRRIRLPMRKY 727

Query: 2280 HPKNDGPKVPFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDT 2456
            +PK+DGPKVPF+ D+E  PS PKADALFIPRENPR+LVI P ++WPS+ S EK S L  +
Sbjct: 728  YPKHDGPKVPFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSRESAEKASPLNAS 787

Query: 2457 DPVH---------------------KNDCLAENGSDRERIHLAEDKQRANGVHEDKSTQK 2573
             PVH                     KN   AENG  +E++ +    Q+ NGVHED +TQK
Sbjct: 788  APVHENGKFSVSEDACPSNGSTAGDKNKNSAENGVIKEQVKV---NQKPNGVHEDHATQK 844

Query: 2574 PDSYITQNGHRSGDAASVHEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHV 2753
             +SY+T +GHR+G+AA V+EHG +IE+++PKL+ +DY+TEP+IQELAAKERA PGFCRHV
Sbjct: 845  EESYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHV 904

Query: 2754 KGFVVGRH 2777
            K FVVGRH
Sbjct: 905  KDFVVGRH 912



 Score = 42.0 bits (97), Expect(2) = 6e-84
 Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAF--NTQSAGLFQSTTPSLGQTTSPFGQTSSAFGQSTPS 1866
            T+  G  SPF S    NTQS+  F STTPS+GQTT+ F Q S+ FG ST S
Sbjct: 536  TTGQGNASPFGSNMFNNTQSSLSFPSTTPSMGQTTA-FPQ-SNPFGPSTTS 584



 Score =  136 bits (343), Expect = 9e-29
 Identities = 71/120 (59%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFG+T S F AQ S FG+Q  T +FG++ F Q  FGG R G+R A Y+ TAE +GG+
Sbjct: 338  GSSPFGSTTSTFPAQPSPFGAQPTTSAFGNTGFAQPGFGGHRPGTRAAPYAETAEAEGGA 397

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQP---AGFGTPAAQSNPF 1356
                AGKL SISAM  YK+KSHEELRWEDYQLGDKGGP P  Q    AG+     Q+NPF
Sbjct: 398  Q---AGKLVSISAMPAYKDKSHEELRWEDYQLGDKGGPLPPGQSPGGAGYSMSTPQANPF 454



 Score = 79.0 bits (193), Expect = 2e-11
 Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
 Frame = +1

Query: 490 KPAFGG------FGSTPSQASP-FGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAP 648
           +P FG       FG+T  Q  P FGNT QQ Q  FG+N    S PFGA SQ AFG+ S P
Sbjct: 151 QPGFGSTTQTSPFGNTNQQPQPGFGNTNQQPQPGFGNNSLFGSTPFGAPSQSAFGAASTP 210

Query: 649 AFGMTSTPAFGATS--QPFGATST 714
           AFG T+ PAFG+TS    FG+TST
Sbjct: 211 AFGTTTAPAFGSTSTTPAFGSTST 234


>ref|XP_012470341.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X3
            [Gossypium raimondii] gi|763751478|gb|KJB18866.1|
            hypothetical protein B456_003G072900 [Gossypium
            raimondii]
          Length = 1005

 Score =  315 bits (807), Expect = 1e-82
 Identities = 163/276 (59%), Positives = 199/276 (72%), Gaps = 3/276 (1%)
 Frame = +3

Query: 1959 AGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQMSI 2138
            +GAFSF+NFGQTQ                                   +GTLPAMPQMSI
Sbjct: 606  SGAFSFSNFGQTQPGGGSGIFGQSNIGLSSATQTAAVVQPGTIINP--YGTLPAMPQMSI 663

Query: 2139 GRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKVPFY 2315
            G++G+ P+VQYGISSMPV +KP P R+S LLTSR++SQRR     RKYHP N+GPKVPF+
Sbjct: 664  GQAGTAPSVQYGISSMPVVDKPAPARISPLLTSRYLSQRRIRLPARKYHPNNNGPKVPFF 723

Query: 2316 YDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTDP-VHKNDCLAE 2489
             DDE  P  PKADA+FIPRENPR+L+I P E WPS+AS EK S LK T   VH+N+  AE
Sbjct: 724  NDDEETPHTPKADAVFIPRENPRALIIRPTESWPSRASAEKASSLKVTSAAVHENENPAE 783

Query: 2490 NGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASVHEHGTEIESVLPKL 2669
            NG  +ERIH  +  Q+ANGVH+D S QK +SY+T NGHR+G+AA V+EHG +IE+++PKL
Sbjct: 784  NGHVKERIHPVKGNQKANGVHDDHSAQK-ESYMTLNGHRAGEAAIVYEHGADIEALMPKL 842

Query: 2670 KHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            + +DYYTEP+IQELAAKERAEPG+CRHVK FVVGRH
Sbjct: 843  RRSDYYTEPRIQELAAKERAEPGYCRHVKDFVVGRH 878



 Score =  163 bits (412), Expect = 9e-37
 Identities = 83/123 (67%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGTT   FGAQSS FGSQ + P+FGS++ GQS FGGQRGGSRVA Y+PT + D GS
Sbjct: 297  GSSPFGTTS--FGAQSSPFGSQSSAPAFGSTSLGQSPFGGQRGGSRVAPYTPTTDADSGS 354

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
              QP  KLESISAM VYK+KSHEELRWEDYQLGDKGGP PA Q     GFG     ++PF
Sbjct: 355  G-QPGAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPQPAAQATGGIGFGASTVSTSPF 413

Query: 1357 GGT 1365
            G +
Sbjct: 414  GSS 416



 Score =  108 bits (271), Expect = 2e-20
 Identities = 58/84 (69%), Positives = 69/84 (82%), Gaps = 6/84 (7%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGAS-----SQPAFGSTSAPA 651
           QKPAFG FGS+P+Q++PFG+T QQ+Q AFGS +FGSS PFG++     S PAFGSTS+PA
Sbjct: 106 QKPAFG-FGSSPTQSNPFGSTNQQSQPAFGSGIFGSSTPFGSTQSAFGSSPAFGSTSSPA 164

Query: 652 FGMTSTPAFGATSQP-FGATSTPA 720
           FG TST AFGA+S P FGATSTPA
Sbjct: 165 FGATSTLAFGASSTPGFGATSTPA 188



 Score = 64.3 bits (155), Expect = 6e-07
 Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFGSN---LFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  T +AFG +   +FG+   FG+SS PAFG+++ PAFG +
Sbjct: 203 PAFGAT-STPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGSSSSPAFGTSTTPAFGAS 261

Query: 664 STPAFGATSQP-FGATSTPA 720
           S+ AFG +S P FGA+STP+
Sbjct: 262 SS-AFGGSSTPAFGASSTPS 280


>gb|KJB39538.1| hypothetical protein B456_007G018500 [Gossypium raimondii]
          Length = 1125

 Score =  313 bits (802), Expect = 5e-82
 Identities = 158/276 (57%), Positives = 196/276 (71%), Gaps = 3/276 (1%)
 Frame = +3

Query: 1959 AGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQMSI 2138
            +GAFSF+NFGQ+Q                                   +GTLPAMPQ+SI
Sbjct: 724  SGAFSFSNFGQSQPGGGSSIFGQSNIGLSYVSSTQSAAVAQPSTIANPYGTLPAMPQISI 783

Query: 2139 GRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKVPFY 2315
            GR+G+ P+VQYGISSMPV +KP P+R+  LLTSR++SQRR    TRKYHP ND PK+PF+
Sbjct: 784  GRTGAAPSVQYGISSMPVVDKPAPVRILPLLTSRYLSQRRIRLPTRKYHPNNDSPKIPFF 843

Query: 2316 YDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVHKNDCLAE 2489
             DDE  P  PKA A+FIPRENPRSLVI P + WPS+AS EK S LKD   P H+N+  AE
Sbjct: 844  SDDEETPCVPKAGAVFIPRENPRSLVIRPTKSWPSRASAEKASPLKDASTPPHENENPAE 903

Query: 2490 NGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASVHEHGTEIESVLPKL 2669
            NG  +ERIH+    Q+ANGVH+D ST+K D Y+T +GHR+G+AA V+EHG +IE+++PKL
Sbjct: 904  NGLVKERIHIIRSNQKANGVHDDYSTEKDDLYMTISGHRAGEAAIVYEHGADIEALMPKL 963

Query: 2670 KHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            +  DY+TEP+IQELAAKERAEPG+CR VK FVVGRH
Sbjct: 964  RRFDYFTEPRIQELAAKERAEPGYCRRVKDFVVGRH 999



 Score =  187 bits (476), Expect = 3e-44
 Identities = 94/125 (75%), Positives = 104/125 (83%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGTT   FGAQSS FGSQ +TP+FGS++FGQS FGGQRGGSRVA YS T E DGGS
Sbjct: 410  GSSPFGTTA--FGAQSSPFGSQSSTPAFGSTSFGQSPFGGQRGGSRVAPYSSTTEADGGS 467

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
             TQPAGKLESISAM VYK+KSHEELRWEDYQLGDKGGPNPA+QP+   GFG   + SNPF
Sbjct: 468  GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGIGFGVSTSPSNPF 527

Query: 1357 GGTNT 1371
              ++T
Sbjct: 528  STSST 532



 Score =  110 bits (275), Expect = 7e-21
 Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTS 666
           QKPAFG FGST +Q+SPFG+T QQ+Q AFGS +FGSS PFG SS PAFG+TS  AFG TS
Sbjct: 115 QKPAFG-FGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFG-SSTPAFGATSTSAFGATS 172

Query: 667 TPAFGATSQP-FGATSTPA 720
           TPAFGATS P FGATSTP+
Sbjct: 173 TPAFGATSAPAFGATSTPS 191



 Score = 81.6 bits (200), Expect = 4e-12
 Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 6/82 (7%)
 Frame = +1

Query: 493 PAFGG-----FGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFG 657
           PAFGG     FG++ S +  FG+ F Q+  AFGS    S+  FG++S PAFG+TS PAFG
Sbjct: 267 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFG 326

Query: 658 MTSTPAFGATSQP-FGATSTPA 720
            TS PAFGATS P FG+T +PA
Sbjct: 327 STSIPAFGATSTPAFGSTGSPA 348



 Score = 72.8 bits (177), Expect = 2e-09
 Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 20/96 (20%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFGSN---LFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  T +AFG +   +FG+   FGASS PAFG++S PAFG +
Sbjct: 214 PAFGAT-STPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFGGS 272

Query: 664 STPAFGATSQP-----------------FGATSTPA 720
           STPAFGA+S P                 FGATSTPA
Sbjct: 273 STPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPA 308



 Score = 67.0 bits (162), Expect = 9e-08
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFG---SNLFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  + +AFG   +++FG+   FGASS PAFG++S+PAFG +
Sbjct: 331 PAFGAT-STPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFGTSSSPAFGAS 389

Query: 664 STPAFGATSQPFGATSTPA 720
           STP+F   S P    STPA
Sbjct: 390 STPSFSFGSSPTFGQSTPA 408



 Score = 61.2 bits (147), Expect = 5e-06
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
 Frame = +1

Query: 490 KPAFGGFGSTPSQASPFGNTFQQTQ-----SAFGSNLFGSSAPFGASSQPAFGSTSAPAF 654
           KP+FG    TP  +   G+ F  T      SA  S+ F S+  FGASS PAFGS S PAF
Sbjct: 36  KPSFGSI--TPFGSQTGGSIFGGTSTGVFGSAQSSSPFSSTTAFGASSSPAFGS-SMPAF 92

Query: 655 GMTSTPAFGATSQPFGATS 711
           G +STPAFG+++  FG +S
Sbjct: 93  GSSSTPAFGSSASSFGGSS 111


>gb|KJB39535.1| hypothetical protein B456_007G018500 [Gossypium raimondii]
          Length = 1048

 Score =  313 bits (802), Expect = 5e-82
 Identities = 158/276 (57%), Positives = 196/276 (71%), Gaps = 3/276 (1%)
 Frame = +3

Query: 1959 AGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQMSI 2138
            +GAFSF+NFGQ+Q                                   +GTLPAMPQ+SI
Sbjct: 647  SGAFSFSNFGQSQPGGGSSIFGQSNIGLSYVSSTQSAAVAQPSTIANPYGTLPAMPQISI 706

Query: 2139 GRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKVPFY 2315
            GR+G+ P+VQYGISSMPV +KP P+R+  LLTSR++SQRR    TRKYHP ND PK+PF+
Sbjct: 707  GRTGAAPSVQYGISSMPVVDKPAPVRILPLLTSRYLSQRRIRLPTRKYHPNNDSPKIPFF 766

Query: 2316 YDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVHKNDCLAE 2489
             DDE  P  PKA A+FIPRENPRSLVI P + WPS+AS EK S LKD   P H+N+  AE
Sbjct: 767  SDDEETPCVPKAGAVFIPRENPRSLVIRPTKSWPSRASAEKASPLKDASTPPHENENPAE 826

Query: 2490 NGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASVHEHGTEIESVLPKL 2669
            NG  +ERIH+    Q+ANGVH+D ST+K D Y+T +GHR+G+AA V+EHG +IE+++PKL
Sbjct: 827  NGLVKERIHIIRSNQKANGVHDDYSTEKDDLYMTISGHRAGEAAIVYEHGADIEALMPKL 886

Query: 2670 KHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            +  DY+TEP+IQELAAKERAEPG+CR VK FVVGRH
Sbjct: 887  RRFDYFTEPRIQELAAKERAEPGYCRRVKDFVVGRH 922



 Score =  187 bits (476), Expect = 3e-44
 Identities = 94/125 (75%), Positives = 104/125 (83%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGTT   FGAQSS FGSQ +TP+FGS++FGQS FGGQRGGSRVA YS T E DGGS
Sbjct: 333  GSSPFGTTA--FGAQSSPFGSQSSTPAFGSTSFGQSPFGGQRGGSRVAPYSSTTEADGGS 390

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
             TQPAGKLESISAM VYK+KSHEELRWEDYQLGDKGGPNPA+QP+   GFG   + SNPF
Sbjct: 391  GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGIGFGVSTSPSNPF 450

Query: 1357 GGTNT 1371
              ++T
Sbjct: 451  STSST 455



 Score =  110 bits (275), Expect = 7e-21
 Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTS 666
           QKPAFG FGST +Q+SPFG+T QQ+Q AFGS +FGSS PFG SS PAFG+TS  AFG TS
Sbjct: 38  QKPAFG-FGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFG-SSTPAFGATSTSAFGATS 95

Query: 667 TPAFGATSQP-FGATSTPA 720
           TPAFGATS P FGATSTP+
Sbjct: 96  TPAFGATSAPAFGATSTPS 114



 Score = 81.6 bits (200), Expect = 4e-12
 Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 6/82 (7%)
 Frame = +1

Query: 493 PAFGG-----FGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFG 657
           PAFGG     FG++ S +  FG+ F Q+  AFGS    S+  FG++S PAFG+TS PAFG
Sbjct: 190 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFG 249

Query: 658 MTSTPAFGATSQP-FGATSTPA 720
            TS PAFGATS P FG+T +PA
Sbjct: 250 STSIPAFGATSTPAFGSTGSPA 271



 Score = 72.8 bits (177), Expect = 2e-09
 Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 20/96 (20%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFGSN---LFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  T +AFG +   +FG+   FGASS PAFG++S PAFG +
Sbjct: 137 PAFGAT-STPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFGGS 195

Query: 664 STPAFGATSQP-----------------FGATSTPA 720
           STPAFGA+S P                 FGATSTPA
Sbjct: 196 STPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPA 231



 Score = 67.0 bits (162), Expect = 9e-08
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFG---SNLFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  + +AFG   +++FG+   FGASS PAFG++S+PAFG +
Sbjct: 254 PAFGAT-STPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFGTSSSPAFGAS 312

Query: 664 STPAFGATSQPFGATSTPA 720
           STP+F   S P    STPA
Sbjct: 313 STPSFSFGSSPTFGQSTPA 331


>ref|XP_011038039.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X1
            [Populus euphratica]
          Length = 1029

 Score =  293 bits (749), Expect(2) = 5e-82
 Identities = 160/308 (51%), Positives = 200/308 (64%), Gaps = 23/308 (7%)
 Frame = +3

Query: 1923 FNTIIASXXXXXAGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2102
            FN +  S     AG F+ N F QTQ A N                               
Sbjct: 589  FNQMTPSQPAQNAGIFALN-FSQTQAAGNSGYAGVSSNFGQPFTTQNAVAVQPVPITNP- 646

Query: 2103 FGTLPAMPQMSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKY 2279
            FGTLPAMPQ+S GR+G+ P+VQYGIS+MPV EKP+PIR+SSLLTSRH+SQRR     RKY
Sbjct: 647  FGTLPAMPQVSFGRAGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQRRIRLPMRKY 706

Query: 2280 HPKNDGPKVPFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDT 2456
            +PK+DGPKVPF+ D+E  PS PKADALFIPRENPR+LVI P ++WPS+   EK S L  +
Sbjct: 707  YPKHDGPKVPFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSREIAEKASPLNAS 766

Query: 2457 DPVH---------------------KNDCLAENGSDRERIHLAEDKQRANGVHEDKSTQK 2573
             PVH                     KN   AENG  +E++ +    Q+ NGVHED +T +
Sbjct: 767  APVHENGEFSVSEDASPSNDSAAGDKNKNSAENGVIKEQVKV---NQKPNGVHEDHATLR 823

Query: 2574 PDSYITQNGHRSGDAASVHEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHV 2753
             +SY+T +GHR+G+AA V+EHG +IE+++PKL+ +DY+TEP+IQELAAKERA PGFCRHV
Sbjct: 824  EESYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHV 883

Query: 2754 KGFVVGRH 2777
            K FVVGRH
Sbjct: 884  KDFVVGRH 891



 Score = 42.7 bits (99), Expect(2) = 5e-82
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAF--NTQSAGLFQSTTPSLGQTT-----SPFGQTSSAFGQSTPSFG 1872
            T+  G  SPF S    NTQS+  F STTPS+GQTT     +PFG ++++   S+P+ G
Sbjct: 515  TTGQGNASPFGSNMFNNTQSSLSFPSTTPSMGQTTAFPQSNPFGPSTTSSLFSSPATG 572



 Score =  136 bits (343), Expect = 9e-29
 Identities = 71/120 (59%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFG+T S F AQ S FG+Q  T +FG++ F Q  FGG R G+R A Y+ TAE +GG+
Sbjct: 317  GSSPFGSTTSTFPAQPSPFGAQPTTSAFGNTGFAQPGFGGHRPGTRAAPYAETAEAEGGA 376

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQP---AGFGTPAAQSNPF 1356
                AGKL SISAM  YK+KSHEELRWEDYQLGDKGGP P  Q    AG+     Q+NPF
Sbjct: 377  Q---AGKLVSISAMPAYKDKSHEELRWEDYQLGDKGGPLPPGQSPGGAGYSMSTPQANPF 433



 Score = 85.5 bits (210), Expect = 2e-13
 Identities = 46/72 (63%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
 Frame = +1

Query: 505 GFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTSTPAFGA 684
           GFGST +Q SPFGNT QQ Q  FG+N    S PFGA SQ AFG+ S PAFG T+ PAFGA
Sbjct: 134 GFGST-TQTSPFGNTNQQPQPGFGNNSLFGSTPFGAPSQSAFGAASTPAFGTTTAPAFGA 192

Query: 685 TS--QPFGATST 714
           TS    FG+TST
Sbjct: 193 TSTTPAFGSTST 204


>ref|XP_011038041.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X2
            [Populus euphratica]
          Length = 1028

 Score =  293 bits (749), Expect(2) = 5e-82
 Identities = 160/308 (51%), Positives = 200/308 (64%), Gaps = 23/308 (7%)
 Frame = +3

Query: 1923 FNTIIASXXXXXAGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2102
            FN +  S     AG F+ N F QTQ A N                               
Sbjct: 588  FNQMTPSQPAQNAGIFALN-FSQTQAAGNSGYAGVSSNFGQPFTTQNAVAVQPVPITNP- 645

Query: 2103 FGTLPAMPQMSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKY 2279
            FGTLPAMPQ+S GR+G+ P+VQYGIS+MPV EKP+PIR+SSLLTSRH+SQRR     RKY
Sbjct: 646  FGTLPAMPQVSFGRAGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQRRIRLPMRKY 705

Query: 2280 HPKNDGPKVPFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDT 2456
            +PK+DGPKVPF+ D+E  PS PKADALFIPRENPR+LVI P ++WPS+   EK S L  +
Sbjct: 706  YPKHDGPKVPFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSREIAEKASPLNAS 765

Query: 2457 DPVH---------------------KNDCLAENGSDRERIHLAEDKQRANGVHEDKSTQK 2573
             PVH                     KN   AENG  +E++ +    Q+ NGVHED +T +
Sbjct: 766  APVHENGEFSVSEDASPSNDSAAGDKNKNSAENGVIKEQVKV---NQKPNGVHEDHATLR 822

Query: 2574 PDSYITQNGHRSGDAASVHEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHV 2753
             +SY+T +GHR+G+AA V+EHG +IE+++PKL+ +DY+TEP+IQELAAKERA PGFCRHV
Sbjct: 823  EESYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHV 882

Query: 2754 KGFVVGRH 2777
            K FVVGRH
Sbjct: 883  KDFVVGRH 890



 Score = 42.7 bits (99), Expect(2) = 5e-82
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAF--NTQSAGLFQSTTPSLGQTT-----SPFGQTSSAFGQSTPSFG 1872
            T+  G  SPF S    NTQS+  F STTPS+GQTT     +PFG ++++   S+P+ G
Sbjct: 514  TTGQGNASPFGSNMFNNTQSSLSFPSTTPSMGQTTAFPQSNPFGPSTTSSLFSSPATG 571



 Score =  136 bits (343), Expect = 9e-29
 Identities = 71/120 (59%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFG+T S F AQ S FG+Q  T +FG++ F Q  FGG R G+R A Y+ TAE +GG+
Sbjct: 316  GSSPFGSTTSTFPAQPSPFGAQPTTSAFGNTGFAQPGFGGHRPGTRAAPYAETAEAEGGA 375

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQP---AGFGTPAAQSNPF 1356
                AGKL SISAM  YK+KSHEELRWEDYQLGDKGGP P  Q    AG+     Q+NPF
Sbjct: 376  Q---AGKLVSISAMPAYKDKSHEELRWEDYQLGDKGGPLPPGQSPGGAGYSMSTPQANPF 432



 Score = 85.5 bits (210), Expect = 2e-13
 Identities = 46/72 (63%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
 Frame = +1

Query: 505 GFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTSTPAFGA 684
           GFGST +Q SPFGNT QQ Q  FG+N    S PFGA SQ AFG+ S PAFG T+ PAFGA
Sbjct: 133 GFGST-TQTSPFGNTNQQPQPGFGNNSLFGSTPFGAPSQSAFGAASTPAFGTTTAPAFGA 191

Query: 685 TS--QPFGATST 714
           TS    FG+TST
Sbjct: 192 TSTTPAFGSTST 203


>ref|XP_010660457.1| PREDICTED: nuclear pore complex protein NUP98A [Vitis vinifera]
          Length = 1047

 Score =  312 bits (800), Expect = 9e-82
 Identities = 166/296 (56%), Positives = 197/296 (66%), Gaps = 24/296 (8%)
 Frame = +3

Query: 1962 GAFSFNNFGQTQTAS----NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQ 2129
            GAF F+NFGQTQ A                                     FGTLPAMPQ
Sbjct: 623  GAFGFSNFGQTQAAGASGFGGGSNIFGSNAFGQSSAAQNSVVVQPAPAANPFGTLPAMPQ 682

Query: 2130 MSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKV 2306
            MSIGR+G+ P++QYGISSMPV +KP P+R+SSLLTSRH+SQRR     RKYHPKND PKV
Sbjct: 683  MSIGRTGTAPSIQYGISSMPVVDKPAPVRISSLLTSRHLSQRRIRLPARKYHPKNDAPKV 742

Query: 2307 PFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVHKNDC 2480
            PF+ DDE  PS PKADALF+PRENPRSLVI P E+W  +++ EK S LK+   PVH+N  
Sbjct: 743  PFFSDDEETPSTPKADALFVPRENPRSLVIRPMEQWSLRSNAEKTSPLKEASKPVHENGK 802

Query: 2481 -----------------LAENGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRS 2609
                             L ENG  +ERIH  +  Q+ NGVH+D S QK DSYIT  GHR+
Sbjct: 803  VSEEGLNGSNAGDKDANLVENGLAKERIHTMKPNQKPNGVHDDHSIQKGDSYITLTGHRA 862

Query: 2610 GDAASVHEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            G+AA V+EHG +IE+++PKL+ +DYYTEP+IQELAAKERAEPGFCR VK FVVGRH
Sbjct: 863  GEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRH 918



 Score =  187 bits (475), Expect = 5e-44
 Identities = 91/123 (73%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGT  SPFGAQSS FG+Q  TP+FG + FGQS FGGQRGGSRVAAY+PT EVD GS
Sbjct: 294  GSSPFGTATSPFGAQSSPFGAQATTPTFGGTGFGQSAFGGQRGGSRVAAYTPTTEVDSGS 353

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQP---AGFGTPAAQSNPF 1356
             TQP GKLESISAM VYK+KSHEELRWEDYQLGDKGGP PA+Q     GFG    QSNPF
Sbjct: 354  GTQPVGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPAPASQSTGGVGFGASNTQSNPF 413

Query: 1357 GGT 1365
              +
Sbjct: 414  AAS 416



 Score =  118 bits (296), Expect = 3e-23
 Identities = 62/87 (71%), Positives = 67/87 (77%), Gaps = 9/87 (10%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAP-------FGASSQPAFGSTSA 645
           QKP FGGFGSTP+Q SPFG+ FQQ+Q AFGS+LFGSS P       FGASS PAF +TS 
Sbjct: 114 QKPGFGGFGSTPTQTSPFGSAFQQSQPAFGSSLFGSSTPFGASQAAFGASSTPAFAATST 173

Query: 646 PAFGMTSTPAFGATS--QPFGATSTPA 720
           PAFG TSTPAFGATS    FGATSTPA
Sbjct: 174 PAFGATSTPAFGATSTTPAFGATSTPA 200



 Score = 76.3 bits (186), Expect = 1e-10
 Identities = 47/85 (55%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
 Frame = +1

Query: 493 PAFGG-----FGSTPSQASPFGNTFQQTQSAFGSN---LFGSSAPFGASSQPAFGSTSAP 648
           PAFG      FGSTPS       TF  T SAFG +   +F SS  FGASS P FGS++  
Sbjct: 199 PAFGATGTSAFGSTPSP------TFGSTGSAFGGSGAPVFASSGAFGASSTPVFGSSTTS 252

Query: 649 AFGMTSTPAFGATSQP-FGATSTPA 720
           AFG +STPAFGA+S P FGA+STP+
Sbjct: 253 AFGTSSTPAFGASSTPAFGASSTPS 277



 Score = 66.6 bits (161), Expect = 1e-07
 Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAFN---TQSAGLFQSTTPSLGQTTSPFGQTSSAFGQS-TPSFGQTNM 1884
            T A GT   F S  N   TQS+ LFQS+TPSLGQT S FGQ++SAFGQS TPSFGQ+++
Sbjct: 516  TPAQGTAPAFGSGLNFGNTQSSPLFQSSTPSLGQTASAFGQSTSAFGQSTTPSFGQSSI 574


>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score =  312 bits (800), Expect = 9e-82
 Identities = 166/296 (56%), Positives = 197/296 (66%), Gaps = 24/296 (8%)
 Frame = +3

Query: 1962 GAFSFNNFGQTQTAS----NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQ 2129
            GAF F+NFGQTQ A                                     FGTLPAMPQ
Sbjct: 623  GAFGFSNFGQTQAAGASGFGGGSNIFGSNAFGQSSAAQNSVVVQPAPAANPFGTLPAMPQ 682

Query: 2130 MSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKV 2306
            MSIGR+G+ P++QYGISSMPV +KP P+R+SSLLTSRH+SQRR     RKYHPKND PKV
Sbjct: 683  MSIGRTGTAPSIQYGISSMPVVDKPAPVRISSLLTSRHLSQRRIRLPARKYHPKNDAPKV 742

Query: 2307 PFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVHKNDC 2480
            PF+ DDE  PS PKADALF+PRENPRSLVI P E+W  +++ EK S LK+   PVH+N  
Sbjct: 743  PFFSDDEETPSTPKADALFVPRENPRSLVIRPMEQWSLRSNAEKTSPLKEASKPVHENGK 802

Query: 2481 -----------------LAENGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRS 2609
                             L ENG  +ERIH  +  Q+ NGVH+D S QK DSYIT  GHR+
Sbjct: 803  VSEEGLNGSNAGDKDANLVENGLAKERIHTMKPNQKPNGVHDDHSIQKGDSYITLTGHRA 862

Query: 2610 GDAASVHEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            G+AA V+EHG +IE+++PKL+ +DYYTEP+IQELAAKERAEPGFCR VK FVVGRH
Sbjct: 863  GEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRH 918



 Score =  187 bits (475), Expect = 5e-44
 Identities = 91/123 (73%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGT  SPFGAQSS FG+Q  TP+FG + FGQS FGGQRGGSRVAAY+PT EVD GS
Sbjct: 294  GSSPFGTATSPFGAQSSPFGAQATTPTFGGTGFGQSAFGGQRGGSRVAAYTPTTEVDSGS 353

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQP---AGFGTPAAQSNPF 1356
             TQP GKLESISAM VYK+KSHEELRWEDYQLGDKGGP PA+Q     GFG    QSNPF
Sbjct: 354  GTQPVGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPAPASQSTGGVGFGASNTQSNPF 413

Query: 1357 GGT 1365
              +
Sbjct: 414  AAS 416



 Score = 75.9 bits (185), Expect = 2e-10
 Identities = 42/67 (62%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +2

Query: 167 ERCLVQQILLGSHQVVHLGPNQFSGATMPVTILLLP-NPLGVHLPLVHRLGVPYLVAHQL 343
           ERCLV    LGSH V HLG NQF G  + +  +LLP NPL V   L HRLGVPYLVA QL
Sbjct: 46  ERCLVLVTHLGSHPVAHLGLNQFLGRPIMLLPILLPLNPLVVQPLLAHRLGVPYLVALQL 105

Query: 344 ACLVRPN 364
            CLV+PN
Sbjct: 106 VCLVQPN 112



 Score = 66.6 bits (161), Expect = 1e-07
 Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
 Frame = +1

Query: 1720 TSASGTTSPFPSAFN---TQSAGLFQSTTPSLGQTTSPFGQTSSAFGQS-TPSFGQTNM 1884
            T A GT   F S  N   TQS+ LFQS+TPSLGQT S FGQ++SAFGQS TPSFGQ+++
Sbjct: 516  TPAQGTAPAFGSGLNFGNTQSSPLFQSSTPSLGQTASAFGQSTSAFGQSTTPSFGQSSI 574


>ref|XP_011004364.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X3
            [Populus euphratica]
          Length = 1005

 Score =  311 bits (798), Expect = 2e-81
 Identities = 150/227 (66%), Positives = 189/227 (83%), Gaps = 2/227 (0%)
 Frame = +3

Query: 2103 FGTLPAMPQMSIGRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKY 2279
            FGTLPAMPQMSIGR+G+ P+VQYGISSMPV EKP+P+RVSSLLTSRH+SQRR     RKY
Sbjct: 651  FGTLPAMPQMSIGRAGTTPSVQYGISSMPVIEKPSPVRVSSLLTSRHLSQRRIRLPARKY 710

Query: 2280 HPKNDGPKVPFYYDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDT 2456
            +PK+DGPKVPF+ D+E  PS PKADALFIPRENP++LVI P ++WP +AS +K S +  +
Sbjct: 711  YPKHDGPKVPFFSDEEETPSTPKADALFIPRENPKALVIRPMDQWPPRASADKASPVNAS 770

Query: 2457 DPVHKNDCLAENGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASVHEH 2636
             PVH+N+ LAENG  +E+    +  Q+ NGVHED S QK +SY+T +GHR+G+AA V+EH
Sbjct: 771  APVHENENLAENGVIKEQAPHVKVNQKPNGVHEDHSAQKEESYMTLSGHRAGEAAIVYEH 830

Query: 2637 GTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            G +IE+++PKL+ +DY+TEP+IQELAAKERA+PGFCRHVK FVVGRH
Sbjct: 831  GADIEALMPKLRRSDYFTEPRIQELAAKERAKPGFCRHVKDFVVGRH 877



 Score =  140 bits (354), Expect = 5e-30
 Identities = 74/120 (61%), Positives = 85/120 (70%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFG+T S F AQ+S FG+Q  T  FG++ F QS FG QR GSR + Y+ TAE +GG+
Sbjct: 313  GSSPFGSTTSTFPAQTSPFGAQSTTSPFGNNGFAQSGFGVQRPGSRASPYAETAEAEGGA 372

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQP---AGFGTPAAQSNPF 1356
                AGKL SISAM  YK+KSHEELRWEDYQLGDKGGP PA Q     GF   A+Q NPF
Sbjct: 373  Q---AGKLLSISAMTAYKDKSHEELRWEDYQLGDKGGPLPAGQSPGGGGFNVSASQPNPF 429



 Score =  104 bits (260), Expect = 4e-19
 Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTS 666
           QKP FGGFGST +QASPFG+T QQ+Q AFG++LFGS+ PFGA +Q AFG+TSAPAFG TS
Sbjct: 116 QKP-FGGFGST-AQASPFGSTNQQSQPAFGNSLFGST-PFGAPTQSAFGATSAPAFGATS 172

Query: 667 TPAFGATS-QPFGATST 714
           TPAFGATS  PFG+TST
Sbjct: 173 TPAFGATSTPPFGSTST 189


>gb|KJB18865.1| hypothetical protein B456_003G072900 [Gossypium raimondii]
          Length = 1021

 Score =  311 bits (797), Expect = 2e-81
 Identities = 164/290 (56%), Positives = 199/290 (68%), Gaps = 17/290 (5%)
 Frame = +3

Query: 1959 AGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQMSI 2138
            +GAFSF+NFGQTQ                                   +GTLPAMPQMSI
Sbjct: 606  SGAFSFSNFGQTQPGGGSGIFGQSNIGLSYVSATQTAAVVQPGTIINPYGTLPAMPQMSI 665

Query: 2139 GRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKVPFY 2315
            G++G+ P+VQYGISSMPV +KP P R+S LLTSR++SQRR     RKYHP N+GPKVPF+
Sbjct: 666  GQAGTAPSVQYGISSMPVVDKPAPARISPLLTSRYLSQRRIRLPARKYHPNNNGPKVPFF 725

Query: 2316 YDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTDP-VH------- 2468
             DDE  P  PKADA+FIPRENPR+L+I P E WPS+AS EK S LK T   VH       
Sbjct: 726  NDDEETPHTPKADAVFIPRENPRALIIRPTESWPSRASAEKASSLKVTSAAVHENGKISD 785

Query: 2469 -------KNDCLAENGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASV 2627
                   KN+  AENG  +ERIH  +  Q+ANGVH+D S QK +SY+T NGHR+G+AA V
Sbjct: 786  GSSNAEDKNENPAENGHVKERIHPVKGNQKANGVHDDHSAQK-ESYMTLNGHRAGEAAIV 844

Query: 2628 HEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            +EHG +IE+++PKL+ +DYYTEP+IQELAAKERAEPG+CRHVK FVVGRH
Sbjct: 845  YEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGYCRHVKDFVVGRH 894



 Score =  163 bits (412), Expect = 9e-37
 Identities = 83/123 (67%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGTT   FGAQSS FGSQ + P+FGS++ GQS FGGQRGGSRVA Y+PT + D GS
Sbjct: 297  GSSPFGTTS--FGAQSSPFGSQSSAPAFGSTSLGQSPFGGQRGGSRVAPYTPTTDADSGS 354

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
              QP  KLESISAM VYK+KSHEELRWEDYQLGDKGGP PA Q     GFG     ++PF
Sbjct: 355  G-QPGAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPQPAAQATGGIGFGASTVSTSPF 413

Query: 1357 GGT 1365
            G +
Sbjct: 414  GSS 416



 Score =  108 bits (271), Expect = 2e-20
 Identities = 58/84 (69%), Positives = 69/84 (82%), Gaps = 6/84 (7%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGAS-----SQPAFGSTSAPA 651
           QKPAFG FGS+P+Q++PFG+T QQ+Q AFGS +FGSS PFG++     S PAFGSTS+PA
Sbjct: 106 QKPAFG-FGSSPTQSNPFGSTNQQSQPAFGSGIFGSSTPFGSTQSAFGSSPAFGSTSSPA 164

Query: 652 FGMTSTPAFGATSQP-FGATSTPA 720
           FG TST AFGA+S P FGATSTPA
Sbjct: 165 FGATSTLAFGASSTPGFGATSTPA 188



 Score = 64.3 bits (155), Expect = 6e-07
 Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFGSN---LFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  T +AFG +   +FG+   FG+SS PAFG+++ PAFG +
Sbjct: 203 PAFGAT-STPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGSSSSPAFGTSTTPAFGAS 261

Query: 664 STPAFGATSQP-FGATSTPA 720
           S+ AFG +S P FGA+STP+
Sbjct: 262 SS-AFGGSSTPAFGASSTPS 280


>gb|KJB39542.1| hypothetical protein B456_007G018500 [Gossypium raimondii]
          Length = 1123

 Score =  309 bits (791), Expect = 1e-80
 Identities = 158/276 (57%), Positives = 196/276 (71%), Gaps = 3/276 (1%)
 Frame = +3

Query: 1959 AGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQMSI 2138
            +GAFSF+NFGQ+Q                                   +GTLPAMPQ+SI
Sbjct: 724  SGAFSFSNFGQSQPGGGSSIFGQSNIGLSSSTQSAAVAQPSTIANP--YGTLPAMPQISI 781

Query: 2139 GRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKVPFY 2315
            GR+G+ P+VQYGISSMPV +KP P+R+  LLTSR++SQRR    TRKYHP ND PK+PF+
Sbjct: 782  GRTGAAPSVQYGISSMPVVDKPAPVRILPLLTSRYLSQRRIRLPTRKYHPNNDSPKIPFF 841

Query: 2316 YDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVHKNDCLAE 2489
             DDE  P  PKA A+FIPRENPRSLVI P + WPS+AS EK S LKD   P H+N+  AE
Sbjct: 842  SDDEETPCVPKAGAVFIPRENPRSLVIRPTKSWPSRASAEKASPLKDASTPPHENENPAE 901

Query: 2490 NGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASVHEHGTEIESVLPKL 2669
            NG  +ERIH+    Q+ANGVH+D ST+K D Y+T +GHR+G+AA V+EHG +IE+++PKL
Sbjct: 902  NGLVKERIHIIRSNQKANGVHDDYSTEKDDLYMTISGHRAGEAAIVYEHGADIEALMPKL 961

Query: 2670 KHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            +  DY+TEP+IQELAAKERAEPG+CR VK FVVGRH
Sbjct: 962  RRFDYFTEPRIQELAAKERAEPGYCRRVKDFVVGRH 997



 Score =  187 bits (476), Expect = 3e-44
 Identities = 94/125 (75%), Positives = 104/125 (83%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGTT   FGAQSS FGSQ +TP+FGS++FGQS FGGQRGGSRVA YS T E DGGS
Sbjct: 410  GSSPFGTTA--FGAQSSPFGSQSSTPAFGSTSFGQSPFGGQRGGSRVAPYSSTTEADGGS 467

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
             TQPAGKLESISAM VYK+KSHEELRWEDYQLGDKGGPNPA+QP+   GFG   + SNPF
Sbjct: 468  GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGIGFGVSTSPSNPF 527

Query: 1357 GGTNT 1371
              ++T
Sbjct: 528  STSST 532



 Score =  110 bits (275), Expect = 7e-21
 Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTS 666
           QKPAFG FGST +Q+SPFG+T QQ+Q AFGS +FGSS PFG SS PAFG+TS  AFG TS
Sbjct: 115 QKPAFG-FGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFG-SSTPAFGATSTSAFGATS 172

Query: 667 TPAFGATSQP-FGATSTPA 720
           TPAFGATS P FGATSTP+
Sbjct: 173 TPAFGATSAPAFGATSTPS 191



 Score = 81.6 bits (200), Expect = 4e-12
 Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 6/82 (7%)
 Frame = +1

Query: 493 PAFGG-----FGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFG 657
           PAFGG     FG++ S +  FG+ F Q+  AFGS    S+  FG++S PAFG+TS PAFG
Sbjct: 267 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFG 326

Query: 658 MTSTPAFGATSQP-FGATSTPA 720
            TS PAFGATS P FG+T +PA
Sbjct: 327 STSIPAFGATSTPAFGSTGSPA 348



 Score = 72.8 bits (177), Expect = 2e-09
 Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 20/96 (20%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFGSN---LFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  T +AFG +   +FG+   FGASS PAFG++S PAFG +
Sbjct: 214 PAFGAT-STPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFGGS 272

Query: 664 STPAFGATSQP-----------------FGATSTPA 720
           STPAFGA+S P                 FGATSTPA
Sbjct: 273 STPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPA 308



 Score = 67.0 bits (162), Expect = 9e-08
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFG---SNLFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  + +AFG   +++FG+   FGASS PAFG++S+PAFG +
Sbjct: 331 PAFGAT-STPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFGTSSSPAFGAS 389

Query: 664 STPAFGATSQPFGATSTPA 720
           STP+F   S P    STPA
Sbjct: 390 STPSFSFGSSPTFGQSTPA 408



 Score = 61.2 bits (147), Expect = 5e-06
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
 Frame = +1

Query: 490 KPAFGGFGSTPSQASPFGNTFQQTQ-----SAFGSNLFGSSAPFGASSQPAFGSTSAPAF 654
           KP+FG    TP  +   G+ F  T      SA  S+ F S+  FGASS PAFGS S PAF
Sbjct: 36  KPSFGSI--TPFGSQTGGSIFGGTSTGVFGSAQSSSPFSSTTAFGASSSPAFGS-SMPAF 92

Query: 655 GMTSTPAFGATSQPFGATS 711
           G +STPAFG+++  FG +S
Sbjct: 93  GSSSTPAFGSSASSFGGSS 111


>gb|KJB39539.1| hypothetical protein B456_007G018500 [Gossypium raimondii]
          Length = 1046

 Score =  309 bits (791), Expect = 1e-80
 Identities = 158/276 (57%), Positives = 196/276 (71%), Gaps = 3/276 (1%)
 Frame = +3

Query: 1959 AGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQMSI 2138
            +GAFSF+NFGQ+Q                                   +GTLPAMPQ+SI
Sbjct: 647  SGAFSFSNFGQSQPGGGSSIFGQSNIGLSSSTQSAAVAQPSTIANP--YGTLPAMPQISI 704

Query: 2139 GRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKVPFY 2315
            GR+G+ P+VQYGISSMPV +KP P+R+  LLTSR++SQRR    TRKYHP ND PK+PF+
Sbjct: 705  GRTGAAPSVQYGISSMPVVDKPAPVRILPLLTSRYLSQRRIRLPTRKYHPNNDSPKIPFF 764

Query: 2316 YDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVHKNDCLAE 2489
             DDE  P  PKA A+FIPRENPRSLVI P + WPS+AS EK S LKD   P H+N+  AE
Sbjct: 765  SDDEETPCVPKAGAVFIPRENPRSLVIRPTKSWPSRASAEKASPLKDASTPPHENENPAE 824

Query: 2490 NGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASVHEHGTEIESVLPKL 2669
            NG  +ERIH+    Q+ANGVH+D ST+K D Y+T +GHR+G+AA V+EHG +IE+++PKL
Sbjct: 825  NGLVKERIHIIRSNQKANGVHDDYSTEKDDLYMTISGHRAGEAAIVYEHGADIEALMPKL 884

Query: 2670 KHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            +  DY+TEP+IQELAAKERAEPG+CR VK FVVGRH
Sbjct: 885  RRFDYFTEPRIQELAAKERAEPGYCRRVKDFVVGRH 920



 Score =  187 bits (476), Expect = 3e-44
 Identities = 94/125 (75%), Positives = 104/125 (83%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGTT   FGAQSS FGSQ +TP+FGS++FGQS FGGQRGGSRVA YS T E DGGS
Sbjct: 333  GSSPFGTTA--FGAQSSPFGSQSSTPAFGSTSFGQSPFGGQRGGSRVAPYSSTTEADGGS 390

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
             TQPAGKLESISAM VYK+KSHEELRWEDYQLGDKGGPNPA+QP+   GFG   + SNPF
Sbjct: 391  GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGIGFGVSTSPSNPF 450

Query: 1357 GGTNT 1371
              ++T
Sbjct: 451  STSST 455



 Score =  110 bits (275), Expect = 7e-21
 Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTS 666
           QKPAFG FGST +Q+SPFG+T QQ+Q AFGS +FGSS PFG SS PAFG+TS  AFG TS
Sbjct: 38  QKPAFG-FGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFG-SSTPAFGATSTSAFGATS 95

Query: 667 TPAFGATSQP-FGATSTPA 720
           TPAFGATS P FGATSTP+
Sbjct: 96  TPAFGATSAPAFGATSTPS 114



 Score = 81.6 bits (200), Expect = 4e-12
 Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 6/82 (7%)
 Frame = +1

Query: 493 PAFGG-----FGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFG 657
           PAFGG     FG++ S +  FG+ F Q+  AFGS    S+  FG++S PAFG+TS PAFG
Sbjct: 190 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFG 249

Query: 658 MTSTPAFGATSQP-FGATSTPA 720
            TS PAFGATS P FG+T +PA
Sbjct: 250 STSIPAFGATSTPAFGSTGSPA 271



 Score = 72.8 bits (177), Expect = 2e-09
 Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 20/96 (20%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFGSN---LFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  T +AFG +   +FG+   FGASS PAFG++S PAFG +
Sbjct: 137 PAFGAT-STPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFGGS 195

Query: 664 STPAFGATSQP-----------------FGATSTPA 720
           STPAFGA+S P                 FGATSTPA
Sbjct: 196 STPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPA 231



 Score = 67.0 bits (162), Expect = 9e-08
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFG---SNLFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  + +AFG   +++FG+   FGASS PAFG++S+PAFG +
Sbjct: 254 PAFGAT-STPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFGTSSSPAFGAS 312

Query: 664 STPAFGATSQPFGATSTPA 720
           STP+F   S P    STPA
Sbjct: 313 STPSFSFGSSPTFGQSTPA 331


>ref|XP_007039293.1| Nucleoporin autopeptidase, putative [Theobroma cacao]
            gi|508776538|gb|EOY23794.1| Nucleoporin autopeptidase,
            putative [Theobroma cacao]
          Length = 1009

 Score =  308 bits (790), Expect = 1e-80
 Identities = 164/290 (56%), Positives = 197/290 (67%), Gaps = 17/290 (5%)
 Frame = +3

Query: 1959 AGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQMSI 2138
            +GAFSF+NFGQTQ  S                                +G LPAMPQMSI
Sbjct: 593  SGAFSFSNFGQTQ--SGGGSGIFGQSNIGQSPATQSAAVVQPMTITNPYGILPAMPQMSI 650

Query: 2139 GRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKVPFY 2315
            GR+G+ P++QYGISSMPV +KP PIR+S LLTSR++SQRR     RKY P ND PKVPF+
Sbjct: 651  GRAGTAPSIQYGISSMPVVDKPAPIRISPLLTSRYLSQRRIRLPARKYRPNNDSPKVPFF 710

Query: 2316 YDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTD-PVHKNDCL-- 2483
             DDE  PS PKADA+FIPRENPR+LVI P E W S+AS EK S LKD   PVH+N  +  
Sbjct: 711  SDDEETPSTPKADAVFIPRENPRALVIRPTENWSSRASAEKASPLKDASTPVHENGKISD 770

Query: 2484 ------------AENGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASV 2627
                        AENG  +ERIH     Q+ANGVH+D S QK DSY+T +GHR+G+AA V
Sbjct: 771  DGSNAEDKDKNPAENGIAKERIHPVRGNQKANGVHDDHSAQKEDSYMTLSGHRAGEAAIV 830

Query: 2628 HEHGTEIESVLPKLKHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            +EHG +IE+++PKL+ +DYYTEP+IQELAAKERAEPG+CR VK FVVGRH
Sbjct: 831  YEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGYCRRVKDFVVGRH 880



 Score =  176 bits (447), Expect = 8e-41
 Identities = 88/125 (70%), Positives = 100/125 (80%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGTT   FGAQSS FG+Q + P+FGS++FGQS FGGQRGGSRVA Y+PT E D GS
Sbjct: 276  GSSPFGTTA--FGAQSSPFGAQSSAPAFGSTSFGQSPFGGQRGGSRVAPYTPTTEADSGS 333

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
             TQPA KLESISAM VYK+KSHEELRWEDYQLGDKGGP PA QP+   GFG   A ++PF
Sbjct: 334  GTQPAAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPQPAAQPSGGIGFGVSTAPTSPF 393

Query: 1357 GGTNT 1371
              ++T
Sbjct: 394  ISSST 398



 Score =  116 bits (290), Expect = 1e-22
 Identities = 62/85 (72%), Positives = 69/85 (81%), Gaps = 7/85 (8%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGA------SSQPAFGSTSAP 648
           QKPAFG FGSTP+Q+SPFG+T QQ+Q AFGS +FGSS PFG+      SS PAFG+TS P
Sbjct: 115 QKPAFG-FGSTPTQSSPFGSTAQQSQPAFGSGIFGSSTPFGSTQSAFGSSTPAFGATSTP 173

Query: 649 AFGMTSTPAFGATSQP-FGATSTPA 720
           AFG TSTPAFGATS P FGATSTPA
Sbjct: 174 AFGATSTPAFGATSTPAFGATSTPA 198



 Score = 70.1 bits (170), Expect = 1e-08
 Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFGSN---LFGSSAPFGASSQPAFGSTSAPAFGMT 663
           PAFG   STP+  S     F  T +AFG +   +FGS   FGASS PAFG++S PAFG +
Sbjct: 189 PAFGAT-STPAFGSTGSPAFGSTGTAFGVSNAPVFGSGGTFGASSIPAFGTSSTPAFGAS 247

Query: 664 STPAFGATSQP-FGATSTPA 720
           STPAFGA+S P F   S+PA
Sbjct: 248 STPAFGASSIPSFSFGSSPA 267


>ref|XP_012474745.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X3
            [Gossypium raimondii]
          Length = 981

 Score =  308 bits (788), Expect = 2e-80
 Identities = 161/276 (58%), Positives = 197/276 (71%), Gaps = 3/276 (1%)
 Frame = +3

Query: 1959 AGAFSFNNFGQTQTASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTLPAMPQMSI 2138
            +GAFSF+N GQTQ +                                 +GTLPAMPQMSI
Sbjct: 590  SGAFSFSNLGQTQMSGGSGIFGQSNVGLPSVTQNAAVVQPVTISNP--YGTLPAMPQMSI 647

Query: 2139 GRSGS-PTVQYGISSMPVTEKPNPIRVSSLLTSRHISQRRNNSATRKYHPKNDGPKVPFY 2315
            GR+G+ P+VQYGISSMPVT+KP P+R+S LLTSR+ISQRR     RKYHP N  PKVPF+
Sbjct: 648  GRAGTAPSVQYGISSMPVTDKPVPVRISPLLTSRYISQRRIRLPARKYHPNNGNPKVPFF 707

Query: 2316 YDDE-APSNPKADALFIPRENPRSLVIGPREKWPSKASLEKPSQLKDTDP-VHKNDCLAE 2489
             DDE  PS PKADA+FIPRENPR+LVI P E WPS+AS+EK   LKD    VH+N+  AE
Sbjct: 708  NDDEETPSTPKADAVFIPRENPRALVIRPTENWPSRASVEKVLPLKDASSLVHENENPAE 767

Query: 2490 NGSDRERIHLAEDKQRANGVHEDKSTQKPDSYITQNGHRSGDAASVHEHGTEIESVLPKL 2669
            NG  +E+IH     Q+ANGVH+D S QK DS+ T +GHR+G+AA V+EHG ++E+++PKL
Sbjct: 768  NGLVKEQIH---HNQKANGVHDDHSVQKEDSFRTLSGHRAGEAAIVYEHGADVEALMPKL 824

Query: 2670 KHADYYTEPQIQELAAKERAEPGFCRHVKGFVVGRH 2777
            + +DYYTEP+IQELAAKERAEPG+CR VK FVVGRH
Sbjct: 825  RRSDYYTEPRIQELAAKERAEPGYCRRVKDFVVGRH 860



 Score =  181 bits (458), Expect = 4e-42
 Identities = 89/125 (71%), Positives = 102/125 (81%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1006 GSSPFGTTPSPFGAQSSSFGSQVATPSFGSSAFGQSTFGGQRGGSRVAAYSPTAEVDGGS 1185
            GSSPFGTT    GAQSS FGSQ ++P+FGS+ FGQS FGGQRGGSRVA Y+PT + D GS
Sbjct: 284  GSSPFGTTT--VGAQSSPFGSQSSSPAFGSTTFGQSAFGGQRGGSRVAPYTPTTDADSGS 341

Query: 1186 STQPAGKLESISAMNVYKEKSHEELRWEDYQLGDKGGPNPATQPA---GFGTPAAQSNPF 1356
             TQPA KLESISAM+VYK+KSHEELRWEDYQLGDKGGP PA QP+   GFG  AA ++PF
Sbjct: 342  GTQPAAKLESISAMHVYKDKSHEELRWEDYQLGDKGGPQPAAQPSGGIGFGVSAAPASPF 401

Query: 1357 GGTNT 1371
            G ++T
Sbjct: 402  GSSST 406



 Score =  109 bits (272), Expect = 2e-20
 Identities = 60/94 (63%), Positives = 68/94 (72%), Gaps = 16/94 (17%)
 Frame = +1

Query: 487 QKPAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFG---------------ASSQ 621
           QKPAFG FGSTP+Q+SPFG++ QQ+Q  FGS +FGSS PFG               A+S 
Sbjct: 113 QKPAFG-FGSTPTQSSPFGSSGQQSQPTFGSGIFGSSTPFGSTQSAFGATSTAAFGATST 171

Query: 622 PAFGSTSAPAFGMTSTPAFGATSQP-FGATSTPA 720
           PAFG+TS PAFG TSTPAFGATS P FGATSTPA
Sbjct: 172 PAFGATSTPAFGATSTPAFGATSTPAFGATSTPA 205



 Score = 63.9 bits (154), Expect = 8e-07
 Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +1

Query: 493 PAFGGFGSTPSQASPFGNTFQQTQSAFGSNLFGSSAPFGASSQPAFGSTSAPAFGMTSTP 672
           PAFG   STP+  S     F  T S FGS    +   FG S+ PAFG++S PAFG +STP
Sbjct: 204 PAFGAT-STPAFGSTSSPAFGSTGSPFGS----TGTAFGVSNAPAFGASSTPAFGTSSTP 258

Query: 673 AFGATSQP-FGATSTPA 720
           AFGA+S P F   S+PA
Sbjct: 259 AFGASSTPSFSFGSSPA 275