BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00005552
         (481 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_028986336.1| ribonuclease H [Thermicanus aegyptius]             74   6e-11
ref|WP_005588650.1| ribonuclease H [[Clostridium] ultunense] gi|...    74   6e-11
ref|WP_019556098.1| ribonuclease HI [Thiomicrospira arctica]           72   2e-10
ref|WP_004335139.1| ribonuclease H [Porphyromonas endodontalis] ...    72   2e-10
ref|WP_012325793.1| ribonuclease HI [Shewanella woodyi] gi|16981...    71   3e-10
ref|WP_045153603.1| ribonuclease HI [Photobacterium angustum] gi...    69   1e-09
ref|WP_045130882.1| ribonuclease HI [Photobacterium angustum] gi...    69   1e-09
ref|WP_045128943.1| ribonuclease HI [Photobacterium angustum] gi...    69   1e-09
ref|WP_045084375.1| MULTISPECIES: ribonuclease HI [Photobacteriu...    69   1e-09
ref|WP_005368524.1| ribonuclease HI [Photobacterium angustum] gi...    69   1e-09
ref|WP_053987167.1| ribonuclease HI [Photobacterium leiognathi] ...    69   1e-09
ref|WP_050649457.1| ribonuclease HI [Vibrio sp. J2-4] gi|8578854...    69   1e-09
ref|WP_050652361.1| MULTISPECIES: ribonuclease HI [Vibrio] gi|85...    69   1e-09
ref|WP_045071234.1| ribonuclease HI [Photobacterium leiognathi] ...    69   1e-09
ref|WP_045065851.1| ribonuclease HI [Photobacterium leiognathi] ...    69   1e-09
ref|WP_040725246.1| ribonuclease HI [Thiomicrospira sp. Kp2]           69   1e-09
ref|WP_023931798.1| ribonuclease HI [Photobacterium leiognathi] ...    69   1e-09
ref|WP_017071180.1| ribonuclease HI, partial [Vibrio crassostreae]     69   1e-09
ref|WP_017070271.1| MULTISPECIES: ribonuclease HI [Vibrio] gi|85...    69   1e-09
ref|WP_008987386.1| ribonuclease HI [Photobacterium leiognathi] ...    69   1e-09

>ref|WP_028986336.1| ribonuclease H [Thermicanus aegyptius]
          Length = 218

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = -3

Query: 476 PKYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAY 339
           PKYYVVW GR PGIYT W  CK+Q+  +PGA YKS+ T +EA+RAY
Sbjct: 4   PKYYVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAY 49


>ref|WP_005588650.1| ribonuclease H [[Clostridium] ultunense]
           gi|452990499|emb|CCQ98285.1| Ribonuclease H
           [[Clostridium] ultunense Esp]
          Length = 218

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = -3

Query: 476 PKYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAY 339
           PKYYVVW GR PGIYT W  CK+Q+  +PGA YKS+ T +EA+RAY
Sbjct: 4   PKYYVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAY 49


>ref|WP_019556098.1| ribonuclease HI [Thiomicrospira arctica]
          Length = 261

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYGI 330
           K+YVVW G+VPGIYT W+ CK QVD++ GA YKS+ T  EA++AY G+
Sbjct: 4   KFYVVWQGKVPGIYTDWNSCKSQVDKFAGAKYKSFPTLAEAEQAYVGV 51


>ref|WP_004335139.1| ribonuclease H [Porphyromonas endodontalis]
           gi|229316106|gb|EEN82034.1| hypothetical protein
           POREN0001_1938 [Porphyromonas endodontalis ATCC 35406]
          Length = 205

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           K+YVVWVGR+PG+Y SW  CK+QV+ + GA YKS+ T  EAQRAY G
Sbjct: 4   KFYVVWVGRIPGVYASWGECKEQVEGFTGAKYKSFSTELEAQRAYSG 50


>ref|WP_012325793.1| ribonuclease HI [Shewanella woodyi] gi|169812873|gb|ACA87457.1|
           ribonuclease H [Shewanella woodyi ATCC 51908]
          Length = 251

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAY 339
           KYYVVWVGR PGIYTSW   K+QVD+YP A YKSY +  EA+ AY
Sbjct: 4   KYYVVWVGRTPGIYTSWDEAKKQVDKYPKAKYKSYKSKTEAETAY 48


>ref|WP_045153603.1| ribonuclease HI [Photobacterium angustum]
           gi|767116898|gb|KJG36063.1| ribonuclease HI
           [Photobacterium angustum]
          Length = 255

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ + +EAQ A+ G
Sbjct: 4   KFYVVWQGREPGIYTDWTSCKQQVDKFAGAKYKSFPSQEEAQAAFGG 50


>ref|WP_045130882.1| ribonuclease HI [Photobacterium angustum]
           gi|767083782|gb|KJG04693.1| ribonuclease HI
           [Photobacterium angustum] gi|767095650|gb|KJG15839.1|
           ribonuclease HI [Photobacterium angustum]
           gi|767101913|gb|KJG21504.1| ribonuclease HI
           [Photobacterium angustum] gi|767109713|gb|KJG29054.1|
           ribonuclease HI [Photobacterium angustum]
          Length = 255

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ + +EAQ A+ G
Sbjct: 4   KFYVVWQGREPGIYTDWTSCKQQVDKFAGAKYKSFPSQEEAQAAFGG 50


>ref|WP_045128943.1| ribonuclease HI [Photobacterium angustum]
           gi|767072027|gb|KJF93601.1| ribonuclease HI
           [Photobacterium angustum] gi|767079381|gb|KJG00629.1|
           ribonuclease HI [Photobacterium angustum]
           gi|767108602|gb|KJG27966.1| ribonuclease HI
           [Photobacterium angustum]
          Length = 255

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ + +EAQ A+ G
Sbjct: 4   KFYVVWQGREPGIYTDWTSCKQQVDKFAGAKYKSFPSQEEAQAAFGG 50


>ref|WP_045084375.1| MULTISPECIES: ribonuclease HI [Photobacterium]
           gi|767057863|gb|KJF80620.1| ribonuclease HI
           [Photobacterium damselae subsp. damselae]
           gi|767118747|gb|KJG37881.1| ribonuclease HI
           [Photobacterium angustum] gi|767125090|gb|KJG44071.1|
           ribonuclease HI [Photobacterium angustum]
           gi|767128300|gb|KJG47214.1| ribonuclease HI
           [Photobacterium angustum] gi|767132732|gb|KJG51528.1|
           ribonuclease HI [Photobacterium angustum]
          Length = 255

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ + +EAQ A+ G
Sbjct: 4   KFYVVWQGREPGIYTDWASCKQQVDKFAGAKYKSFPSQEEAQAAFGG 50


>ref|WP_005368524.1| ribonuclease HI [Photobacterium angustum]
           gi|90439824|gb|EAS65005.1| hypothetical ribonuclease HI
           [Photobacterium angustum S14]
          Length = 255

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ + +EAQ A+ G
Sbjct: 4   KFYVVWQGREPGIYTDWTSCKQQVDKFAGAKYKSFPSQEEAQAAFGG 50


>ref|WP_053987167.1| ribonuclease HI [Photobacterium leiognathi]
           gi|927980993|gb|KPA54362.1| ribonuclease HI
           [Photobacterium leiognathi subsp. mandapamensis]
          Length = 255

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAY 339
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ T  EAQ A+
Sbjct: 4   KFYVVWQGRTPGIYTDWASCKQQVDKFAGAKYKSFPTQAEAQAAF 48


>ref|WP_050649457.1| ribonuclease HI [Vibrio sp. J2-4] gi|857885468|emb|CDT67923.1|
           Ribonuclease HI [Vibrio sp. J2-4]
          Length = 257

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           KYYVVW GR PGI+T+W+ CK QVD + GA YKS+ T DEA+ A+ G
Sbjct: 4   KYYVVWKGRTPGIFTTWNECKSQVDGFAGARYKSFPTLDEAESAFGG 50


>ref|WP_050652361.1| MULTISPECIES: ribonuclease HI [Vibrio] gi|857874116|emb|CDT73170.1|
           Ribonuclease HI [Vibrio sp. J2-26]
           gi|857912900|emb|CDU11556.1| Ribonuclease HI [Vibrio sp.
           J2-17]
          Length = 257

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           KYYVVW GR PGI+T+W+ CK QVD + GA YKS+ T DEA+ A+ G
Sbjct: 4   KYYVVWKGRTPGIFTTWNECKSQVDGFAGARYKSFPTLDEAESAFGG 50


>ref|WP_045071234.1| ribonuclease HI [Photobacterium leiognathi]
           gi|767074110|gb|KJF95626.1| ribonuclease HI
           [Photobacterium leiognathi]
          Length = 255

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAY 339
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ T  EAQ A+
Sbjct: 4   KFYVVWQGRTPGIYTDWASCKQQVDKFAGAKYKSFPTQAEAQAAF 48


>ref|WP_045065851.1| ribonuclease HI [Photobacterium leiognathi]
           gi|767065348|gb|KJF87536.1| ribonuclease HI
           [Photobacterium leiognathi]
          Length = 255

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAY 339
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ T  EAQ A+
Sbjct: 4   KFYVVWQGRTPGIYTDWASCKQQVDKFAGAKYKSFPTQAEAQAAF 48


>ref|WP_040725246.1| ribonuclease HI [Thiomicrospira sp. Kp2]
          Length = 255

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           KYYVVW GR PGIYT W+ CK QVD++ GA YKS+ T  EA++A+ G
Sbjct: 4   KYYVVWAGRKPGIYTDWNSCKAQVDKFAGAKYKSFPTQAEAEQAFGG 50


>ref|WP_023931798.1| ribonuclease HI [Photobacterium leiognathi]
           gi|531078248|dbj|GAD29227.1| ribonuclease HI
           [Photobacterium leiognathi lrivu.4.1]
          Length = 255

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAY 339
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ T  EAQ A+
Sbjct: 4   KFYVVWQGRTPGIYTDWASCKQQVDKFAGAKYKSFPTQAEAQAAF 48


>ref|WP_017071180.1| ribonuclease HI, partial [Vibrio crassostreae]
          Length = 246

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           KYYVVW GR PGI+T+W+ CK QVD + GA YKS+ T DEA+ A+ G
Sbjct: 4   KYYVVWKGRTPGIFTTWNECKSQVDGFAGARYKSFPTLDEAESAFGG 50


>ref|WP_017070271.1| MULTISPECIES: ribonuclease HI [Vibrio] gi|857936002|emb|CDT83526.1|
           Ribonuclease HI [Vibrio sp. J2-29]
          Length = 257

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAYYG 333
           KYYVVW GR PGI+T+W+ CK QVD + GA YKS+ T DEA+ A+ G
Sbjct: 4   KYYVVWKGRTPGIFTTWNECKSQVDGFAGARYKSFPTLDEAESAFGG 50


>ref|WP_008987386.1| ribonuclease HI [Photobacterium leiognathi]
           gi|328490504|dbj|GAA04462.1| RNase H family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 255

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 473 KYYVVWVGRVPGIYTSWSVCKQQVDRYPGATYKSYLTYDEAQRAY 339
           K+YVVW GR PGIYT W+ CKQQVD++ GA YKS+ T  EAQ A+
Sbjct: 4   KFYVVWQGRTPGIYTDWASCKQQVDKFAGAKYKSFPTQAEAQAAF 48