BLASTX nr result
ID: Aconitum23_contig00005501
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00005501
(614 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010269894.1| PREDICTED: regulator of nonsense transcripts... 77 7e-12
ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts... 73 1e-10
ref|XP_006858514.1| PREDICTED: regulator of nonsense transcripts... 72 2e-10
ref|XP_010274587.1| PREDICTED: regulator of nonsense transcripts... 71 5e-10
ref|XP_012486783.1| PREDICTED: regulator of nonsense transcripts... 70 9e-10
ref|XP_012486782.1| PREDICTED: regulator of nonsense transcripts... 70 9e-10
ref|XP_012486785.1| PREDICTED: regulator of nonsense transcripts... 70 9e-10
ref|XP_012486781.1| PREDICTED: regulator of nonsense transcripts... 70 9e-10
ref|XP_010677214.1| PREDICTED: regulator of nonsense transcripts... 70 9e-10
gb|KNA21811.1| hypothetical protein SOVF_039840 [Spinacia oleracea] 70 1e-09
ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati... 69 3e-09
ref|XP_012075131.1| PREDICTED: regulator of nonsense transcripts... 68 4e-09
ref|XP_007039605.1| Regulator of nonsense transcripts 1 [Theobro... 68 4e-09
ref|XP_010664057.1| PREDICTED: regulator of nonsense transcripts... 67 1e-08
ref|XP_006385597.1| RNA helicase family protein [Populus trichoc... 66 1e-08
ref|XP_006368472.1| RNA helicase family protein [Populus trichoc... 66 1e-08
gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides] 66 1e-08
ref|XP_011018658.1| PREDICTED: regulator of nonsense transcripts... 65 2e-08
ref|XP_011032015.1| PREDICTED: regulator of nonsense transcripts... 65 3e-08
gb|KJB25397.1| hypothetical protein B456_004G189700 [Gossypium r... 65 4e-08
>ref|XP_010269894.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Nelumbo
nucifera]
Length = 1274
Score = 77.0 bits (188), Expect = 7e-12
Identities = 37/45 (82%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQY 483
LFTQVG+ND SQ+DTS+A FGVG PNPLQSQG MNPLYSQPF QY
Sbjct: 1195 LFTQVGFNDPSQEDTSQAHFGVGGPNPLQSQGLMNPLYSQPFTQY 1239
>ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2
[Vitis vinifera] gi|297742168|emb|CBI33955.3| unnamed
protein product [Vitis vinifera]
Length = 1267
Score = 72.8 bits (177), Expect = 1e-10
Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQY 483
LFTQVG+ND SQDD S++ FGV PNPLQSQG MNPLYSQPFA Y
Sbjct: 1186 LFTQVGFNDPSQDDASQSHFGVANPNPLQSQGLMNPLYSQPFAHY 1230
>ref|XP_006858514.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Amborella
trichopoda] gi|548862623|gb|ERN19981.1| hypothetical
protein AMTR_s00071p00142490 [Amborella trichopoda]
Length = 1252
Score = 72.0 bits (175), Expect = 2e-10
Identities = 34/45 (75%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGV-GPNPLQSQGSMNPLYSQPFAQY 483
LFTQVG+ND SQDD+S+ FG+ GP PLQSQG MNPLYSQPF QY
Sbjct: 1182 LFTQVGFNDPSQDDSSQTHFGMAGPGPLQSQGVMNPLYSQPFTQY 1226
>ref|XP_010274587.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X1
[Nelumbo nucifera]
Length = 1259
Score = 70.9 bits (172), Expect = 5e-10
Identities = 35/45 (77%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQY 483
LFTQVG+ND SQDDTS+A F VG PNPLQSQ MNPLYSQ F QY
Sbjct: 1188 LFTQVGFNDPSQDDTSQAHFSVGAPNPLQSQDMMNPLYSQSFTQY 1232
>ref|XP_012486783.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X3
[Gossypium raimondii]
Length = 1165
Score = 70.1 bits (170), Expect = 9e-10
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVGPNPLQSQGSMNPLYSQPFAQY 483
LFTQVG++D SQDD SR+ FGV PN LQSQG +N LYSQPFAQ+
Sbjct: 1097 LFTQVGFSDPSQDDASRSHFGVNPNQLQSQGFLNSLYSQPFAQF 1140
>ref|XP_012486782.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2
[Gossypium raimondii]
Length = 1247
Score = 70.1 bits (170), Expect = 9e-10
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVGPNPLQSQGSMNPLYSQPFAQY 483
LFTQVG++D SQDD SR+ FGV PN LQSQG +N LYSQPFAQ+
Sbjct: 1179 LFTQVGFSDPSQDDASRSHFGVNPNQLQSQGFLNSLYSQPFAQF 1222
>ref|XP_012486785.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X4
[Gossypium raimondii] gi|763770458|gb|KJB37673.1|
hypothetical protein B456_006G215300 [Gossypium
raimondii]
Length = 1106
Score = 70.1 bits (170), Expect = 9e-10
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVGPNPLQSQGSMNPLYSQPFAQY 483
LFTQVG++D SQDD SR+ FGV PN LQSQG +N LYSQPFAQ+
Sbjct: 1038 LFTQVGFSDPSQDDASRSHFGVNPNQLQSQGFLNSLYSQPFAQF 1081
>ref|XP_012486781.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X1
[Gossypium raimondii] gi|763770457|gb|KJB37672.1|
hypothetical protein B456_006G215300 [Gossypium
raimondii]
Length = 1251
Score = 70.1 bits (170), Expect = 9e-10
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVGPNPLQSQGSMNPLYSQPFAQY 483
LFTQVG++D SQDD SR+ FGV PN LQSQG +N LYSQPFAQ+
Sbjct: 1183 LFTQVGFSDPSQDDASRSHFGVNPNQLQSQGFLNSLYSQPFAQF 1226
>ref|XP_010677214.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Beta vulgaris
subsp. vulgaris] gi|870860387|gb|KMT11734.1| hypothetical
protein BVRB_5g105690 [Beta vulgaris subsp. vulgaris]
Length = 1292
Score = 70.1 bits (170), Expect = 9e-10
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQY 483
LFTQVG+ND SQDD S+ FGVG NPLQSQG MNPLYSQPF Y
Sbjct: 1211 LFTQVGFNDPSQDDNSQGHFGVGNANPLQSQGLMNPLYSQPFTHY 1255
>gb|KNA21811.1| hypothetical protein SOVF_039840 [Spinacia oleracea]
Length = 1294
Score = 69.7 bits (169), Expect = 1e-09
Identities = 34/45 (75%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVGP-NPLQSQGSMNPLYSQPFAQY 483
LFTQVG++D SQDDTS+ FGVG NPLQSQG MNPLYSQPF Y
Sbjct: 1210 LFTQVGFSDPSQDDTSQGHFGVGNMNPLQSQGLMNPLYSQPFTHY 1254
>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 1280
Score = 68.6 bits (166), Expect = 3e-09
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQY 483
LFTQ+G+ND+SQDD S+ FG+ PNPLQSQG MN LYSQPFA Y
Sbjct: 1208 LFTQIGFNDASQDDVSQNHFGIANPNPLQSQGLMNSLYSQPFAHY 1252
>ref|XP_012075131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Jatropha
curcas] gi|643740302|gb|KDP45961.1| hypothetical protein
JCGZ_11864 [Jatropha curcas]
Length = 1270
Score = 67.8 bits (164), Expect = 4e-09
Identities = 31/45 (68%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQY 483
LFTQ+G+ND SQD++S++ FG+ PNPLQSQG MN LYSQPFA Y
Sbjct: 1198 LFTQIGFNDPSQDESSQSHFGIANPNPLQSQGLMNSLYSQPFAHY 1242
>ref|XP_007039605.1| Regulator of nonsense transcripts 1 [Theobroma cacao]
gi|508776850|gb|EOY24106.1| Regulator of nonsense
transcripts 1 [Theobroma cacao]
Length = 1266
Score = 67.8 bits (164), Expect = 4e-09
Identities = 37/75 (49%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQYXXXXXXXXXXXXXXX 438
LFTQVG+ND SQDD S++ FGV PN LQSQG MN LYSQPFA Y
Sbjct: 1192 LFTQVGFNDPSQDDASQSHFGVANPNQLQSQGLMNSLYSQPFAHYNTQPLNLQAPQQQQP 1251
Query: 437 XXXXXXXXXNVHYNG 393
+HYNG
Sbjct: 1252 QQGQGSQNQKLHYNG 1266
>ref|XP_010664057.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X1
[Vitis vinifera]
Length = 1272
Score = 66.6 bits (161), Expect = 1e-08
Identities = 35/50 (70%), Positives = 38/50 (76%), Gaps = 6/50 (12%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGV-GPNPLQS-----QGSMNPLYSQPFAQY 483
LFTQVG+ND SQDD S++ FGV PNPLQS QG MNPLYSQPFA Y
Sbjct: 1186 LFTQVGFNDPSQDDASQSHFGVANPNPLQSQVPDLQGLMNPLYSQPFAHY 1235
>ref|XP_006385597.1| RNA helicase family protein [Populus trichocarpa]
gi|550342726|gb|ERP63394.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1242
Score = 66.2 bits (160), Expect = 1e-08
Identities = 32/45 (71%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGV-GPNPLQSQGSMNPLYSQPFAQY 483
LFTQVGYND SQDD S++ FG+ PN LQSQG MN LYSQPF Y
Sbjct: 1169 LFTQVGYNDPSQDDASQSHFGIANPNQLQSQGLMNSLYSQPFGHY 1213
>ref|XP_006368472.1| RNA helicase family protein [Populus trichocarpa]
gi|550346386|gb|ERP65041.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1256
Score = 66.2 bits (160), Expect = 1e-08
Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQY 483
LFTQVG+ND SQDD S++ FG+ PN LQSQG MN LYSQPFA Y
Sbjct: 1183 LFTQVGFNDPSQDDASQSHFGIANPNQLQSQGLMNSLYSQPFAHY 1227
>gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 582
Score = 66.2 bits (160), Expect = 1e-08
Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGV-GPNPLQSQGSMNPLYSQPFAQY 483
LFTQVG+ND SQDD S++ FG+ PN LQSQG MN LYSQPFA Y
Sbjct: 509 LFTQVGFNDPSQDDASQSHFGITNPNQLQSQGLMNSLYSQPFAHY 553
>ref|XP_011018658.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Populus
euphratica]
Length = 1266
Score = 65.5 bits (158), Expect = 2e-08
Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQY 483
LFTQVG+ND SQDD S++ FG+ PN LQSQG MN LYSQPFA Y
Sbjct: 1193 LFTQVGFNDPSQDDASQSHFGITTPNQLQSQGLMNSLYSQPFAHY 1237
>ref|XP_011032015.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Populus
euphratica]
Length = 1265
Score = 65.1 bits (157), Expect = 3e-08
Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGV-GPNPLQSQGSMNPLYSQPFAQY 483
LFTQVG+ND SQDD S++ FG+ PN LQSQG MN LYSQPF Y
Sbjct: 1192 LFTQVGFNDPSQDDASQSQFGIANPNQLQSQGLMNSLYSQPFGHY 1236
>gb|KJB25397.1| hypothetical protein B456_004G189700 [Gossypium raimondii]
Length = 1192
Score = 64.7 bits (156), Expect = 4e-08
Identities = 36/75 (48%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = -1
Query: 614 LFTQVGYNDSSQDDTSRAPFGVG-PNPLQSQGSMNPLYSQPFAQYXXXXXXXXXXXXXXX 438
LFTQ G+ND SQDD S++ FG PN LQSQG MN LYSQPFA Y
Sbjct: 1118 LFTQAGFNDPSQDDASQSHFGAANPNQLQSQGLMNSLYSQPFAHYNTQPLNLQSPQQQQP 1177
Query: 437 XXXXXXXXXNVHYNG 393
N+HYNG
Sbjct: 1178 QQGQGSQNQNLHYNG 1192