BLASTX nr result

ID: Aconitum23_contig00004937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00004937
         (547 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275763.1| PREDICTED: neurofilament heavy polypeptide-l...    65   2e-08
ref|XP_002515436.1| nucleic acid binding protein, putative [Rici...    60   8e-07
gb|KOC63774.1| Neurofilament heavy polypeptide [Habropoda labori...    57   7e-06

>ref|XP_010275763.1| PREDICTED: neurofilament heavy polypeptide-like [Nelumbo nucifera]
           gi|720063841|ref|XP_010275764.1| PREDICTED:
           neurofilament heavy polypeptide-like [Nelumbo nucifera]
           gi|720063844|ref|XP_010275765.1| PREDICTED:
           neurofilament heavy polypeptide-like [Nelumbo nucifera]
          Length = 923

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
 Frame = -1

Query: 547 SKRGRPARSKKGKTKVVSEAPPELEEKSNRSLGKKDLVDKESEEE----------KVSDA 398
           SKRGR    KK  T    EA P      + S+ K+ L     E+E          K S+A
Sbjct: 474 SKRGRRGPKKKESTS--QEADP-----GSPSVPKEVLPSDHDEDEAKPSTAAISKKESEA 526

Query: 397 SSDSEDKSNKHLGKKGQVDDEKEEE-------KGSEATSDSEEKPLXXXXXXXXXXXXXX 239
           +SDSE K ++  GKK    +  ++        K S  TSDSE K                
Sbjct: 527 TSDSEAKPHRRSGKKASSGNASDKTPAPVDIAKESVRTSDSEAKSQ-------------- 572

Query: 238 XXXXXKPLKRSRKKVDMKRSNSDVSSXXXXXXXXXXXKNLSTTEKELPGKSSNKKTIPTP 59
                   ++S KKVD K ++ D SS           K  S +EK++  ++SNKK + +P
Sbjct: 573 --------RKSNKKVDEKNAHEDESSGKEQEGKKKQGKGKSVSEKDVVEEASNKKIVSSP 624

Query: 58  KSIEKSTSKNQKLPEET 8
           ++  K++ ++Q  PEET
Sbjct: 625 RAAAKTSKRDQAQPEET 641


>ref|XP_002515436.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545380|gb|EEF46885.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 953

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 57/180 (31%), Positives = 79/180 (43%), Gaps = 18/180 (10%)
 Frame = -1

Query: 487 PPELEEKSNRSLGKKDLVDKESEEE------KVSDASSDSEDKSNKHLGKKGQV---DDE 335
           P E   K    L +KD + K+ E        K S+ +SDSE K NK   +KG     ++E
Sbjct: 469 PEESLSKKAGRLKRKDSLIKDLEPSAEDVPRKASEGTSDSETKPNKRSARKGPARISNEE 528

Query: 334 K------EEEKGSEATSDSEEKPLXXXXXXXXXXXXXXXXXXXKPLKRSRKKVDMKRSNS 173
           K       EEK     S+ E  P+                   KPLK+  KK D   +N 
Sbjct: 529 KAPAGISNEEKAPARISNEERAPM--ATDVSQKESGPTDESEEKPLKQPSKKADSSSNNG 586

Query: 172 DVSSXXXXXXXXXXXKNLSTTEKELPGKSS---NKKTIPTPKSIEKSTSKNQKLPEETPR 2
           D SS           +  ST+EK+L   S+   +K+ + +PKS  KST K+  L EETP+
Sbjct: 587 DGSSLNQPEDKKQRSRGKSTSEKKLSKSSTKDYDKEKVSSPKSAAKST-KDLHLLEETPK 645


>gb|KOC63774.1| Neurofilament heavy polypeptide [Habropoda laboriosa]
          Length = 666

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 3/180 (1%)
 Frame = -1

Query: 544 KRGRPARSKKGKTKVVSEAPPELEEKSNRSLGKKDLVDKESEEEKVSDASSDSEDKSNKH 365
           K+    +  + + K  SE   E E+KS +   KK   +K+SE EK S+  S+ + +S K 
Sbjct: 293 KKSESEKKSESEKKSESEKKSESEKKSEKKSEKKSESEKKSESEKKSEKKSEKKSESEKK 352

Query: 364 LGKKGQVDDEKEEEKGSEATSDSEEKPLXXXXXXXXXXXXXXXXXXXKPLKRSRKKVDMK 185
             KK +   EK EEK SE+  +SE+K                     +  K+S +K + K
Sbjct: 353 SEKKSE---EKSEEK-SESEKESEKKSETEKKSESEKESEKKSEKKSESEKKSEEKSEKK 408

Query: 184 RSNSDVSSXXXXXXXXXXXKNLSTTEK---ELPGKSSNKKTIPTPKSIEKSTSKNQKLPE 14
                 S            +  S +EK   E   K S +K+    KS EKS  K+++  E
Sbjct: 409 SEQKSESEKKSEEKSEKKSEQKSESEKKSEEKSEKKSEQKSESEKKSEEKSEKKSEQKSE 468



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
 Frame = -1

Query: 544 KRGRPARSKKGKTKVVSEAPPELEEKSNRSLGKKDLVDKESEE--EKVSDASSDSEDKSN 371
           K+      KK + K  SE+  + EEKS +   +K   +K+SEE  EK S+  S+SE KS 
Sbjct: 417 KKSEEKSEKKSEQK--SESEKKSEEKSEKKSEQKSESEKKSEEKSEKKSEQKSESEKKSE 474

Query: 370 KHLGKKGQVDDEKEE------EKGSEATSDSEEKPLXXXXXXXXXXXXXXXXXXXKPLKR 209
           +   KK +   E E+      EK SE  S+SE+K                     K  K+
Sbjct: 475 EKSEKKSEQKSESEKKSEEKSEKKSEQKSESEKKSEEKSEKKSEQKSESEKKSEEKSEKK 534

Query: 208 SRKKVDMKRSNSDVSSXXXXXXXXXXXK----NLSTTEKELPGKSSNKKTIPTPKSIEKS 41
           S +K + ++ + + S            K      S +EKE   K S KK+    KS EKS
Sbjct: 535 SEQKSESEKKSEEKSEKKSEQKSESEKKAESEKKSKSEKESE-KKSEKKSESEKKSEEKS 593

Query: 40  TSKNQKLPEE 11
             K+ K PE+
Sbjct: 594 EKKSGKKPEK 603


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