BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00004521
         (776 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010246764.1| PREDICTED: regulator of nonsense transcripts...   394   e-107
ref|XP_010246762.1| PREDICTED: regulator of nonsense transcripts...   394   e-107
ref|XP_010246761.1| PREDICTED: regulator of nonsense transcripts...   394   e-107
ref|XP_010246760.1| PREDICTED: regulator of nonsense transcripts...   394   e-107
emb|CDO97628.1| unnamed protein product [Coffea canephora]            360   5e-97
gb|KDO41302.1| hypothetical protein CISIN_1g0102241mg, partial [...   357   4e-96
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   357   4e-96
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...   357   4e-96
ref|XP_009587503.1| PREDICTED: regulator of nonsense transcripts...   352   2e-94
ref|XP_004230442.1| PREDICTED: regulator of nonsense transcripts...   350   8e-94
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts...   347   4e-93
ref|XP_009775100.1| PREDICTED: regulator of nonsense transcripts...   346   9e-93
ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts...   346   1e-92
ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts...   346   1e-92
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts...   346   1e-92
ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform ...   345   2e-92
ref|XP_006858584.1| PREDICTED: regulator of nonsense transcripts...   345   2e-92
ref|XP_009587502.1| PREDICTED: regulator of nonsense transcripts...   344   4e-92
ref|XP_011628613.1| PREDICTED: regulator of nonsense transcripts...   343   8e-92
gb|KHF99019.1| upf3a [Gossypium arboreum]                             342   2e-91

>ref|XP_010246764.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X5
           [Nelumbo nucifera]
          Length = 575

 Score =  394 bits (1013), Expect = e-107
 Identities = 196/247 (79%), Positives = 216/247 (87%), Gaps = 2/247 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MKDP  RTKVVLRHLPPTLSQS L EQIDGRF GRYKW+CFR GKNSQKHQ++SRAY+DF
Sbjct: 1   MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGH+FVNEKG+Q K IVEYAPSQRV KSW KKDGREG+I KDPEYLE
Sbjct: 61  KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FL+ ISKPVENLPSAE+QLE+REAERAGA KE  IVTPLMDFVRQKRAAK G+QR  SNG
Sbjct: 121 FLDLISKPVENLPSAEVQLERREAERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDDPP 753
           KLSRRA G SPG+S ++S+K+GSEKRR STSMYV RDS+KN SGKDKS YI  PRR+D  
Sbjct: 181 KLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQE 240

Query: 754 SSDKSHS 774
            +DKS S
Sbjct: 241 LTDKSVS 247


>ref|XP_010246762.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3
           [Nelumbo nucifera]
          Length = 585

 Score =  394 bits (1013), Expect = e-107
 Identities = 196/247 (79%), Positives = 216/247 (87%), Gaps = 2/247 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MKDP  RTKVVLRHLPPTLSQS L EQIDGRF GRYKW+CFR GKNSQKHQ++SRAY+DF
Sbjct: 1   MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGH+FVNEKG+Q K IVEYAPSQRV KSW KKDGREG+I KDPEYLE
Sbjct: 61  KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FL+ ISKPVENLPSAE+QLE+REAERAGA KE  IVTPLMDFVRQKRAAK G+QR  SNG
Sbjct: 121 FLDLISKPVENLPSAEVQLERREAERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDDPP 753
           KLSRRA G SPG+S ++S+K+GSEKRR STSMYV RDS+KN SGKDKS YI  PRR+D  
Sbjct: 181 KLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQE 240

Query: 754 SSDKSHS 774
            +DKS S
Sbjct: 241 LTDKSVS 247


>ref|XP_010246761.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2
           [Nelumbo nucifera]
          Length = 602

 Score =  394 bits (1013), Expect = e-107
 Identities = 196/247 (79%), Positives = 216/247 (87%), Gaps = 2/247 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MKDP  RTKVVLRHLPPTLSQS L EQIDGRF GRYKW+CFR GKNSQKHQ++SRAY+DF
Sbjct: 1   MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGH+FVNEKG+Q K IVEYAPSQRV KSW KKDGREG+I KDPEYLE
Sbjct: 61  KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FL+ ISKPVENLPSAE+QLE+REAERAGA KE  IVTPLMDFVRQKRAAK G+QR  SNG
Sbjct: 121 FLDLISKPVENLPSAEVQLERREAERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDDPP 753
           KLSRRA G SPG+S ++S+K+GSEKRR STSMYV RDS+KN SGKDKS YI  PRR+D  
Sbjct: 181 KLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQE 240

Query: 754 SSDKSHS 774
            +DKS S
Sbjct: 241 LTDKSVS 247


>ref|XP_010246760.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1
           [Nelumbo nucifera]
          Length = 612

 Score =  394 bits (1013), Expect = e-107
 Identities = 196/247 (79%), Positives = 216/247 (87%), Gaps = 2/247 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MKDP  RTKVVLRHLPPTLSQS L EQIDGRF GRYKW+CFR GKNSQKHQ++SRAY+DF
Sbjct: 1   MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGH+FVNEKG+Q K IVEYAPSQRV KSW KKDGREG+I KDPEYLE
Sbjct: 61  KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FL+ ISKPVENLPSAE+QLE+REAERAGA KE  IVTPLMDFVRQKRAAK G+QR  SNG
Sbjct: 121 FLDLISKPVENLPSAEVQLERREAERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDDPP 753
           KLSRRA G SPG+S ++S+K+GSEKRR STSMYV RDS+KN SGKDKS YI  PRR+D  
Sbjct: 181 KLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQE 240

Query: 754 SSDKSHS 774
            +DKS S
Sbjct: 241 LTDKSVS 247


>emb|CDO97628.1| unnamed protein product [Coffea canephora]
          Length = 517

 Score =  360 bits (925), Expect = 5e-97
 Identities = 180/245 (73%), Positives = 206/245 (84%), Gaps = 2/245 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL RTKVVLRHLPP++SQS LM+Q++ RF+GRY WV FR GK SQK Q +SRAY+DF
Sbjct: 1   MKGPLDRTKVVLRHLPPSISQSSLMDQVETRFSGRYNWVSFRPGKTSQKRQSYSRAYIDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGHVFVNEKGTQ K +VEY PSQRVPK W KKDGREG+ILKDPEYLE
Sbjct: 61  KRPEDVIEFAEFFDGHVFVNEKGTQFKTVVEYGPSQRVPKQWSKKDGREGTILKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE ++KPVENLPSAEIQLE++EAERAG  KE  IVTPLMDFVRQKRAAKSGT+R +SNG
Sbjct: 121 FLEFLAKPVENLPSAEIQLERKEAERAGVTKEAAIVTPLMDFVRQKRAAKSGTRRSASNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDDPP 753
           K +RR  GAS G   ++SSK+GSEKRR ST+MY+ RD+ K  SGKDKS YI  P++DD  
Sbjct: 181 KSNRRVSGASIGGPSSSSSKRGSEKRRMSTTMYILRDNAKATSGKDKSTYILVPKQDDQH 240

Query: 754 SSDKS 768
            SDKS
Sbjct: 241 LSDKS 245


>gb|KDO41302.1| hypothetical protein CISIN_1g0102241mg, partial [Citrus sinensis]
           gi|641821659|gb|KDO41303.1| hypothetical protein
           CISIN_1g0102241mg, partial [Citrus sinensis]
          Length = 260

 Score =  357 bits (917), Expect = 4e-96
 Identities = 178/238 (74%), Positives = 203/238 (85%), Gaps = 2/238 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL RTKVV+R+LPP ++Q    EQIDG F GRY WV FRQGK SQKHQ  +RAY+DF
Sbjct: 1   MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           K+PEDV+EFAEFF+GHVFVNEKG Q K IVEYAPSQRVPK W KKDGREG++LKDPEYLE
Sbjct: 61  KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE ISKPVENLPSAEIQLE+REAERAGA KE LIVTPLMDFVRQKRAAK+G +RL SNG
Sbjct: 121 FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDD 747
           KLSRRA G+S G+  + SSK+GS+K++ ST+MYV RD+ KN+SGKDKS YI  P+RDD
Sbjct: 181 KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDD 238


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
           sinensis]
          Length = 514

 Score =  357 bits (917), Expect = 4e-96
 Identities = 178/238 (74%), Positives = 203/238 (85%), Gaps = 2/238 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL RTKVV+R+LPP ++Q    EQIDG F GRY WV FRQGK SQKHQ  +RAY+DF
Sbjct: 1   MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           K+PEDV+EFAEFF+GHVFVNEKG Q K IVEYAPSQRVPK W KKDGREG++LKDPEYLE
Sbjct: 61  KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE ISKPVENLPSAEIQLE+REAERAGA KE LIVTPLMDFVRQKRAAK+G +RL SNG
Sbjct: 121 FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDD 747
           KLSRRA G+S G+  + SSK+GS+K++ ST+MYV RD+ KN+SGKDKS YI  P+RDD
Sbjct: 181 KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDD 238


>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
           gi|557533707|gb|ESR44825.1| hypothetical protein
           CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  357 bits (917), Expect = 4e-96
 Identities = 178/238 (74%), Positives = 203/238 (85%), Gaps = 2/238 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL RTKVV+R+LPP ++Q    EQIDG F GRY WV FRQGK SQKHQ  +RAY+DF
Sbjct: 1   MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           K+PEDV+EFAEFF+GHVFVNEKG Q K IVEYAPSQRVPK W KKDGREG++LKDPEYLE
Sbjct: 61  KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE ISKPVENLPSAEIQLE+REAERAGA KE LIVTPLMDFVRQKRAAK+G +RL SNG
Sbjct: 121 FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDD 747
           KLSRRA G+S G+  + SSK+GS+K++ ST+MYV RD+ KN+SGKDKS YI  P+RDD
Sbjct: 181 KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDD 238


>ref|XP_009587503.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
           [Nicotiana tomentosiformis]
          Length = 508

 Score =  352 bits (902), Expect = 2e-94
 Identities = 174/244 (71%), Positives = 205/244 (84%), Gaps = 1/244 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL RTKVVLRHLPPT+SQS+L+EQ+  RFTGRY W  FR GK+SQKHQ +SRAY+DF
Sbjct: 1   MKGPLDRTKVVLRHLPPTISQSMLVEQVLSRFTGRYNWFSFRPGKSSQKHQTYSRAYVDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGHVFVNEKGTQ K IVEYAPSQR PK W KKDGREG+ILKDPEYLE
Sbjct: 61  KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRAPKRWSKKDGREGTILKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE I+KP+ENLPSAEIQLE++EAERAG+ K+  IVTPLMD++RQKRAAKSG ++  SNG
Sbjct: 121 FLEFIAKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSN-YIPRRDDPPS 756
           + +RRA G S G+  +++ KQGSEKRR ST+MYV RDS K  SGKDK +  +P+RDD   
Sbjct: 181 RPTRRANGTSSGSPSSSAFKQGSEKRRVSTTMYVLRDSSKAGSGKDKRHILVPKRDDQQQ 240

Query: 757 SDKS 768
           ++KS
Sbjct: 241 AEKS 244


>ref|XP_004230442.1| PREDICTED: regulator of nonsense transcripts UPF3 [Solanum
           lycopersicum]
          Length = 485

 Score =  350 bits (897), Expect = 8e-94
 Identities = 170/244 (69%), Positives = 206/244 (84%), Gaps = 1/244 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL R+KVVLRHLPPT+SQS+L++Q+D RF GRY W CF  GK+SQKHQ +SRAY++F
Sbjct: 1   MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGHVFVNEKGTQ K IVEYAPSQRVP+ W KKDGREG+ILKDPEYLE
Sbjct: 61  KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPQHWSKKDGREGTILKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE ISKP+ENLPSAEIQLE++EAERAG+ K+  IVTPLMD++RQKRAAKSG ++  +NG
Sbjct: 121 FLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI-PRRDDPPS 756
           + +RRA G S G+  +++SK+ SEKRR ST+MYV RDS K  SGKDK+  + P+RDD   
Sbjct: 181 RPTRRASGTSAGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDKTYILAPKRDDQQR 240

Query: 757 SDKS 768
           ++KS
Sbjct: 241 AEKS 244


>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
           tuberosum]
          Length = 483

 Score =  347 bits (891), Expect = 4e-93
 Identities = 169/244 (69%), Positives = 204/244 (83%), Gaps = 1/244 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL R+KVVLRHLPPT+SQS+L++Q+D RF GRY W CF  GK+SQKHQ +SRAY++F
Sbjct: 1   MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           K PEDV+EFAEFFDGHVFVNEKGTQ K IVEYAPSQRVPK W KKDGREG+ILKDPEYLE
Sbjct: 61  KMPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKHWSKKDGREGTILKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE ISKP+ENLPSAEIQLE++EAERAG+ K+  IVTPLMD++RQKRAAKSG ++  +NG
Sbjct: 121 FLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI-PRRDDPPS 756
           + +RR  G S G+  +++SK+ SEKRR ST+MYV RDS K  SGKDK+  + P+RDD   
Sbjct: 181 RPTRRTSGTSTGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDKTYILAPKRDDQQR 240

Query: 757 SDKS 768
           ++KS
Sbjct: 241 AEKS 244


>ref|XP_009775100.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
           [Nicotiana sylvestris]
          Length = 508

 Score =  346 bits (888), Expect = 9e-93
 Identities = 172/244 (70%), Positives = 201/244 (82%), Gaps = 1/244 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL RTKVVLRHLPPT+SQS+L+EQ+  RFTGRY W  FR GK+SQKHQ +SRAY+DF
Sbjct: 1   MKGPLDRTKVVLRHLPPTISQSMLVEQVVSRFTGRYNWFSFRPGKSSQKHQTYSRAYVDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGHVFVNEKGTQ K IVEYAPSQR PK W KKDGREG+ILKDPEYLE
Sbjct: 61  KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRAPKRWSKKDGREGTILKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE I+KP+ENLPSAEIQLE++EAERAG+ K   IVTPLMD++RQKRAAKSG ++  SNG
Sbjct: 121 FLEFIAKPIENLPSAEIQLERKEAERAGSAKNAPIVTPLMDYIRQKRAAKSGARKSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSN-YIPRRDDPPS 756
           + +RR  G S G+  +++ KQGSEKRR ST+MYV RDS K  SGKDK +  +P RD    
Sbjct: 181 RPTRRVDGTSSGSPSSSAFKQGSEKRRVSTTMYVLRDSSKAGSGKDKRHVLVPNRDGQQQ 240

Query: 757 SDKS 768
           ++KS
Sbjct: 241 AEKS 244


>ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
           vinifera]
          Length = 514

 Score =  346 bits (887), Expect = 1e-92
 Identities = 177/245 (72%), Positives = 202/245 (82%), Gaps = 2/245 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL RTKVV+RHLPPT+S++  +EQID  F GRY  V FR GKNSQK Q +SRAY+DF
Sbjct: 1   MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGHVFVNEKGTQ K IVEYAPSQR+PK W KKDGREG+I KDPEY+E
Sbjct: 61  KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           F+E ++KPVENLPSAEIQLE+REAERAGA K+  IVTPLMDFVRQKRAAK  ++R  SNG
Sbjct: 121 FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDDPP 753
           KLSRRA G+S GN    SSK+GSEKRR ST+MYV RD+ K+ S KDKS +I  P+RDD  
Sbjct: 181 KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240

Query: 754 SSDKS 768
            SDKS
Sbjct: 241 LSDKS 245


>ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
           vinifera]
          Length = 515

 Score =  346 bits (887), Expect = 1e-92
 Identities = 177/245 (72%), Positives = 202/245 (82%), Gaps = 2/245 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL RTKVV+RHLPPT+S++  +EQID  F GRY  V FR GKNSQK Q +SRAY+DF
Sbjct: 1   MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGHVFVNEKGTQ K IVEYAPSQR+PK W KKDGREG+I KDPEY+E
Sbjct: 61  KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           F+E ++KPVENLPSAEIQLE+REAERAGA K+  IVTPLMDFVRQKRAAK  ++R  SNG
Sbjct: 121 FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDDPP 753
           KLSRRA G+S GN    SSK+GSEKRR ST+MYV RD+ K+ S KDKS +I  P+RDD  
Sbjct: 181 KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240

Query: 754 SSDKS 768
            SDKS
Sbjct: 241 LSDKS 245


>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
           vinifera] gi|297739512|emb|CBI29694.3| unnamed protein
           product [Vitis vinifera]
          Length = 519

 Score =  346 bits (887), Expect = 1e-92
 Identities = 177/245 (72%), Positives = 202/245 (82%), Gaps = 2/245 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK PL RTKVV+RHLPPT+S++  +EQID  F GRY  V FR GKNSQK Q +SRAY+DF
Sbjct: 1   MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFFDGHVFVNEKGTQ K IVEYAPSQR+PK W KKDGREG+I KDPEY+E
Sbjct: 61  KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           F+E ++KPVENLPSAEIQLE+REAERAGA K+  IVTPLMDFVRQKRAAK  ++R  SNG
Sbjct: 121 FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDDPP 753
           KLSRRA G+S GN    SSK+GSEKRR ST+MYV RD+ K+ S KDKS +I  P+RDD  
Sbjct: 181 KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240

Query: 754 SSDKS 768
            SDKS
Sbjct: 241 LSDKS 245


>ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
           gi|508705135|gb|EOX97031.1| Smg-4/UPF3 family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  345 bits (886), Expect = 2e-92
 Identities = 175/244 (71%), Positives = 204/244 (83%), Gaps = 2/244 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MK  L RTKV+LRHLPP +++++L+EQ+D  F+GRY W+ FR GK+SQKHQ +SRAY+DF
Sbjct: 1   MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KR EDV+EFAEFF+GHVFVNEKGTQ K IVEYAPSQRVPK   KKDGREG+ILKD EYLE
Sbjct: 61  KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE + KPVENLPSAEIQLE++EAERAG  K+  IVTPLMDFVRQKRAAK G++R  SNG
Sbjct: 121 FLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRRDDPP 753
           KLSRRA G+S G   + SSK+GSEKRRGST+MYV RDS+KNASGKDKS YI   +RD+  
Sbjct: 181 KLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQ 240

Query: 754 SSDK 765
            SDK
Sbjct: 241 LSDK 244


>ref|XP_006858584.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2
           [Amborella trichopoda] gi|548862693|gb|ERN20051.1|
           hypothetical protein AMTR_s00071p00188270 [Amborella
           trichopoda]
          Length = 599

 Score =  345 bits (885), Expect = 2e-92
 Identities = 174/245 (71%), Positives = 198/245 (80%), Gaps = 2/245 (0%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MKDPL RTKVV+R LPP L+Q  LME+ID RF+GRY+W  FR GKNS K+Q+ SR Y+DF
Sbjct: 1   MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFF GHVFVNEKG+Q KA+VEYAPSQRVPK W KKDGREG+I KDPEYLE
Sbjct: 61  KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRLSSNG 579
           FLE ++KP ENLPSAEIQLE+REAERAGA KE LIVTPLMDFVRQKRAAKSGT R S+NG
Sbjct: 121 FLEFLAKPAENLPSAEIQLERREAERAGASKESLIVTPLMDFVRQKRAAKSGTLRSSANG 180

Query: 580 KLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNY--IPRRDDPP 753
           K SRR+ G S  +  + S K+G E+R+ STSMYV RDS K  S KDKS Y  +PRRD+  
Sbjct: 181 KTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQK 240

Query: 754 SSDKS 768
             D S
Sbjct: 241 LPDNS 245


>ref|XP_009587502.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
           [Nicotiana tomentosiformis]
          Length = 517

 Score =  344 bits (882), Expect = 4e-92
 Identities = 174/253 (68%), Positives = 205/253 (81%), Gaps = 10/253 (3%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKN---------SQKHQ 192
           MK PL RTKVVLRHLPPT+SQS+L+EQ+  RFTGRY W  FR GK+         SQKHQ
Sbjct: 1   MKGPLDRTKVVLRHLPPTISQSMLVEQVLSRFTGRYNWFSFRPGKSRPSPQIFSCSQKHQ 60

Query: 193 KFSRAYMDFKRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGS 372
            +SRAY+DFKRPEDV+EFAEFFDGHVFVNEKGTQ K IVEYAPSQR PK W KKDGREG+
Sbjct: 61  TYSRAYVDFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRAPKRWSKKDGREGT 120

Query: 373 ILKDPEYLEFLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKS 552
           ILKDPEYLEFLE I+KP+ENLPSAEIQLE++EAERAG+ K+  IVTPLMD++RQKRAAKS
Sbjct: 121 ILKDPEYLEFLEFIAKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKS 180

Query: 553 GTQRLSSNGKLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSN-Y 729
           G ++  SNG+ +RRA G S G+  +++ KQGSEKRR ST+MYV RDS K  SGKDK +  
Sbjct: 181 GARKSLSNGRPTRRANGTSSGSPSSSAFKQGSEKRRVSTTMYVLRDSSKAGSGKDKRHIL 240

Query: 730 IPRRDDPPSSDKS 768
           +P+RDD   ++KS
Sbjct: 241 VPKRDDQQQAEKS 253


>ref|XP_011628613.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1
           [Amborella trichopoda]
          Length = 600

 Score =  343 bits (880), Expect = 8e-92
 Identities = 175/246 (71%), Positives = 199/246 (80%), Gaps = 3/246 (1%)
 Frame = +1

Query: 40  MKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRAYMDF 219
           MKDPL RTKVV+R LPP L+Q  LME+ID RF+GRY+W  FR GKNS K+Q+ SR Y+DF
Sbjct: 1   MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60

Query: 220 KRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDPEYLE 399
           KRPEDV+EFAEFF GHVFVNEKG+Q KA+VEYAPSQRVPK W KKDGREG+I KDPEYLE
Sbjct: 61  KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120

Query: 400 FLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGT-QRLSSN 576
           FLE ++KP ENLPSAEIQLE+REAERAGA KE LIVTPLMDFVRQKRAAKSGT QR S+N
Sbjct: 121 FLEFLAKPAENLPSAEIQLERREAERAGASKESLIVTPLMDFVRQKRAAKSGTLQRSSAN 180

Query: 577 GKLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNY--IPRRDDP 750
           GK SRR+ G S  +  + S K+G E+R+ STSMYV RDS K  S KDKS Y  +PRRD+ 
Sbjct: 181 GKTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQ 240

Query: 751 PSSDKS 768
              D S
Sbjct: 241 KLPDNS 246


>gb|KHF99019.1| upf3a [Gossypium arboreum]
          Length = 577

 Score =  342 bits (877), Expect = 2e-91
 Identities = 170/248 (68%), Positives = 206/248 (83%), Gaps = 2/248 (0%)
 Frame = +1

Query: 28  LLQAMKDPLVRTKVVLRHLPPTLSQSVLMEQIDGRFTGRYKWVCFRQGKNSQKHQKFSRA 207
           + + MK  L RTKV+LRHLPP++++SVL+EQ+D  F+GRY W+ FR GK+SQK+  +SRA
Sbjct: 4   VFEGMKGTLDRTKVILRHLPPSITESVLLEQVDSAFSGRYNWLSFRPGKSSQKNLSYSRA 63

Query: 208 YMDFKRPEDVVEFAEFFDGHVFVNEKGTQVKAIVEYAPSQRVPKSWCKKDGREGSILKDP 387
           Y+DFKRPEDV+EFAEFF+GHVFV+EKG Q KA+VEYAPSQRVPK + KKDGREG+I KDP
Sbjct: 64  YVDFKRPEDVLEFAEFFNGHVFVSEKGAQFKAVVEYAPSQRVPKQFSKKDGREGTISKDP 123

Query: 388 EYLEFLEQISKPVENLPSAEIQLEKREAERAGAGKEPLIVTPLMDFVRQKRAAKSGTQRL 567
           EYLEFLE + KPVENLPSAEIQLE+REAERAG  K+  IVTPLMDFVRQKRAAK  ++R 
Sbjct: 124 EYLEFLEFLEKPVENLPSAEIQLERREAERAGVSKDSPIVTPLMDFVRQKRAAKGASRRS 183

Query: 568 SSNGKLSRRAVGASPGNSRATSSKQGSEKRRGSTSMYVKRDSIKNASGKDKSNYI--PRR 741
            SNGK+S+RA G S G+  + SS++G EKRRGST++YV RDS+KNASGKDKS YI   +R
Sbjct: 184 LSNGKVSKRAGGLSGGSPSSASSRRGCEKRRGSTTVYVLRDSLKNASGKDKSAYILVSKR 243

Query: 742 DDPPSSDK 765
           DD   SDK
Sbjct: 244 DDKQLSDK 251