BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00000111
         (1944 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010272854.1| PREDICTED: RNA polymerase I-specific transcr...   651   0.0  
ref|XP_010272853.1| PREDICTED: RNA polymerase I-specific transcr...   642   0.0  
ref|XP_010649342.1| PREDICTED: RNA polymerase I-specific transcr...   622   e-175
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              619   e-174
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...   595   e-167
ref|XP_010033606.1| PREDICTED: RNA polymerase I-specific transcr...   595   e-167
ref|XP_010088711.1| hypothetical protein L484_016497 [Morus nota...   592   e-166
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...   592   e-166
gb|KCW53301.1| hypothetical protein EUGRSUZ_J02557 [Eucalyptus g...   590   e-165
gb|KCW53303.1| hypothetical protein EUGRSUZ_J02557 [Eucalyptus g...   584   e-163
ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcr...   580   e-162
ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcr...   577   e-161
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   570   e-159
ref|XP_012067216.1| PREDICTED: RNA polymerase I-specific transcr...   569   e-159
ref|XP_012067215.1| PREDICTED: RNA polymerase I-specific transcr...   569   e-159
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   565   e-158
gb|KHN38852.1| RNA polymerase I-specific transcription initiatio...   565   e-158
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   561   e-157
ref|XP_008438040.1| PREDICTED: RNA polymerase I-specific transcr...   559   e-156
ref|XP_007046443.1| Major facilitator superfamily protein isofor...   558   e-156

>ref|XP_010272854.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Nelumbo nucifera]
            gi|720053835|ref|XP_010272855.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like [Nelumbo nucifera]
          Length = 631

 Score =  651 bits (1679), Expect = 0.0
 Identities = 350/567 (61%), Positives = 406/567 (71%), Gaps = 2/567 (0%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLL 1752
            H SLLSSIFGMSMWNY  DVMDAL ELI SLAASNGKF   CLDMLV NF PP S+L LL
Sbjct: 84   HESLLSSIFGMSMWNYGPDVMDALVELIISLAASNGKFVDSCLDMLVRNFTPPKSYLDLL 143

Query: 1751 SQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFL 1572
              PRG+ARK +VL RVHSAL+ IADLVPL P+ L  I+ Q +PHM  K    +       
Sbjct: 144  GHPRGLARKHEVLDRVHSALSHIADLVPLAPMRLTPIILQRMPHMFDKETLIV------- 196

Query: 1571 QKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMEL 1392
                IYVE+MLRLES ALG+++G  ML  +V RL++LDVEI WD+I+ +D  KGIFDMEL
Sbjct: 197  ----IYVESMLRLESSALGEFVGSTMLMALVDRLIDLDVEISWDDIVLEDSGKGIFDMEL 252

Query: 1391 EDIDEDAEYDENDT-DLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVF 1215
            ED+D+   Y E D  + P+   G Q  G +  A+KLD+LMVL CEH+KSC+D  RL +VF
Sbjct: 253  EDVDDIIGYAEKDGFEHPRGTLGRQSLGTNAVADKLDSLMVLACEHLKSCADGERLTKVF 312

Query: 1214 ETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSA 1035
            ETLL SF  +ILNA+KSKF+QFVMFYACSLDPE+C  RFA  LAD F+  T   LTRMSA
Sbjct: 313  ETLLQSFWVTILNAYKSKFSQFVMFYACSLDPEHCGERFAVFLADIFVCRTHPALTRMSA 372

Query: 1034 VAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVM 855
            VAYLASYLSRG+FLP +L+ASTLKRLVDWC EYC++Q  EEK   P  HRVFYSGCQA+M
Sbjct: 373  VAYLASYLSRGKFLPPSLIASTLKRLVDWCLEYCQVQNGEEKTLYPETHRVFYSGCQAIM 432

Query: 854  YVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVS 675
            YVLCFRMR MMD   LKSQLL MPLE I R  LDPLKVCLPSIV EFLRQAKAA LFTVS
Sbjct: 433  YVLCFRMRSMMDSHRLKSQLLHMPLEPIFRHQLDPLKVCLPSIVEEFLRQAKAAHLFTVS 492

Query: 674  ENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXX 498
            E F FN+LLESDLSK +GG+ERLDMFFP+DPCLLK CDR+IRP+F+YWSMVKT Y     
Sbjct: 493  ETFLFNNLLESDLSKAFGGMERLDMFFPFDPCLLKKCDRFIRPSFVYWSMVKTTYDEGED 552

Query: 497  XXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSI 318
                           + DGN + + D  + RS                +NKMSITP+ S+
Sbjct: 553  CSSEEDINE------YFDGNGKSYMDGGITRSLDEHDLDLDEFEC--QLNKMSITPRNSL 604

Query: 317  KNRFPAGVQRPTQMPARIRPSTSPESL 237
            KN     ++   +MPARIRPSTSPESL
Sbjct: 605  KNGLINKLENYMRMPARIRPSTSPESL 631


>ref|XP_010272853.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Nelumbo nucifera]
          Length = 631

 Score =  642 bits (1657), Expect = 0.0
 Identities = 346/567 (61%), Positives = 405/567 (71%), Gaps = 2/567 (0%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLL 1752
            H SLLSSIFGMSMWNY  DVMDAL ELI SLAASNGKF   CLDMLV NF+PP S+L LL
Sbjct: 84   HESLLSSIFGMSMWNYGPDVMDALVELIISLAASNGKFVDSCLDMLVRNFMPPKSYLDLL 143

Query: 1751 SQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFL 1572
              PRG+ARK +VL RVHSAL+ IADLVPL P+ L  I+ Q +PHM  K    +       
Sbjct: 144  GHPRGLARKHEVLDRVHSALSHIADLVPLAPMRLTPIILQRMPHMFDKEALIV------- 196

Query: 1571 QKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMEL 1392
                IYVE+ML LES ALG+ +G  ML  +V RL++LDVEI WD+I+ +D  KGIFDMEL
Sbjct: 197  ----IYVESMLLLESSALGELVGSTMLMALVDRLIDLDVEISWDDIIHEDSGKGIFDMEL 252

Query: 1391 EDIDEDAEYDENDT-DLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVF 1215
            ED+D+  ++ E D  + P+   G Q  G +  A+KLD+LMVL CEH+KSC+D  RL +VF
Sbjct: 253  EDVDDIIDHAEIDGFEHPRGTAGSQILGTNAVADKLDSLMVLICEHLKSCADGERLTKVF 312

Query: 1214 ETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSA 1035
            ETLL SF  ++LNA+KSKF+QFVMFYACSLDPE+C  RFA  LAD F+  T   LTRMSA
Sbjct: 313  ETLLQSFWVTVLNAYKSKFSQFVMFYACSLDPEHCGERFAVFLADIFVCRTHPALTRMSA 372

Query: 1034 VAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVM 855
            VAYLASYLSRG+FLP +L+ASTLKRLVDWC EYC +Q  EEK  N   HRVFYSGCQA+M
Sbjct: 373  VAYLASYLSRGKFLPLSLIASTLKRLVDWCLEYCHVQNGEEKTINLEAHRVFYSGCQAIM 432

Query: 854  YVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVS 675
            YVLCFRMR MMD   LKSQLL MPLE I    LDPLKVCLPSIV EFLRQAKAA LFTVS
Sbjct: 433  YVLCFRMRSMMDSHRLKSQLLHMPLEPIFCHQLDPLKVCLPSIVEEFLRQAKAAHLFTVS 492

Query: 674  ENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXX 498
            E F FN+LLESDLSK +GG+ERLDMFFP+DPCLLK CDR+IRP+F+YWSMVKT Y     
Sbjct: 493  ETFLFNNLLESDLSKAFGGMERLDMFFPFDPCLLKKCDRFIRPSFVYWSMVKTTYDDGED 552

Query: 497  XXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSI 318
                           + DGN + + +  + RS                +NKMSITP+ S+
Sbjct: 553  CSSEEDINE------YFDGNGKSYMESGITRSLDEHDLDLDEFEY--QLNKMSITPRNSL 604

Query: 317  KNRFPAGVQRPTQMPARIRPSTSPESL 237
            KN     ++ P +MPARIRPSTSPESL
Sbjct: 605  KNGLIFKLENPFRMPARIRPSTSPESL 631


>ref|XP_010649342.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3 [Vitis vinifera]
          Length = 627

 Score =  622 bits (1603), Expect = e-175
 Identities = 339/567 (59%), Positives = 407/567 (71%), Gaps = 2/567 (0%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLL 1752
            H SLLSSIFGMS+WNY  DVMDAL ELI SLAAS+G +    LDMLV NF+PP+S L  L
Sbjct: 84   HKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFMPPYSLLDFL 143

Query: 1751 SQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFL 1572
             QPRG+ARK+QVL RVHS L DIADLVPL P  L  IV Q +P++ +K    +       
Sbjct: 144  KQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPLIM------- 196

Query: 1571 QKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMEL 1392
                IYVENMLRLE GA+ + +G  ML  ++ RLV+LDVEI W+E+LQDD SKGIF+MEL
Sbjct: 197  ----IYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKGIFEMEL 252

Query: 1391 EDIDEDAEYDENDT-DLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVF 1215
            ED++E A+  END  +L +     +  G ++ AEKLD+LMVLT EH++SC   GRL EVF
Sbjct: 253  EDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVF 312

Query: 1214 ETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSA 1035
            ETL+LSF+ ++LNA KSKFAQFVMFYAC+LDPENC VRFA +LAD F+ +T  PL RMSA
Sbjct: 313  ETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMSA 372

Query: 1034 VAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVM 855
            VAYLASYLSRG+FL  + VA+ L+RLV WC EYCK   I +   NP  H+VFYSGCQA+M
Sbjct: 373  VAYLASYLSRGKFLTASFVANILERLVVWCLEYCK---IHDGDINPKAHQVFYSGCQAIM 429

Query: 854  YVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVS 675
            YVLCFRMR MM+VPHL+SQLL +PLE IL+  L PLKVCLPSIV EFLRQAKAA+LFTVS
Sbjct: 430  YVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVS 489

Query: 674  ENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXX 498
            E F F+DLLES+LS+ +GGIERLDMFFP+DPCLLK CDR+IRPNF+YWSM++T Y     
Sbjct: 490  ETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYDDGED 549

Query: 497  XXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSI 318
                                 +   D+ M RS             ++SMNKMSITPK S+
Sbjct: 550  SSDEEPAEDYE-----ASHPDDVMNDDAMARS--YDSHDLELDEFDHSMNKMSITPKNSL 602

Query: 317  KNRFPAGVQRPTQMPARIRPSTSPESL 237
              RF  G +   QMP+RIRPSTSPESL
Sbjct: 603  YYRF--GDELKVQMPSRIRPSTSPESL 627


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  619 bits (1595), Expect = e-174
 Identities = 337/567 (59%), Positives = 406/567 (71%), Gaps = 2/567 (0%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLL 1752
            H SLLSSIFGMS+WNY  DVMDAL ELI SLAAS+G +    LDMLV NF+PP+S L  L
Sbjct: 84   HKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFMPPYSLLDFL 143

Query: 1751 SQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFL 1572
             QPRG+ARK+QVL RVHS L DIADLVPL P  L  IV Q +P++ +K    +       
Sbjct: 144  KQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPLIM------- 196

Query: 1571 QKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMEL 1392
                IYVENMLRLE GA+ + +G  ML  ++ RLV+LDVEI W+E+LQDD SKGIF+MEL
Sbjct: 197  ----IYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKGIFEMEL 252

Query: 1391 EDIDEDAEYDENDT-DLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVF 1215
            ED++E A+  END  +L +     +  G ++ AEKLD+LMVLT EH++SC   GRL EVF
Sbjct: 253  EDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVF 312

Query: 1214 ETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSA 1035
            ETL+LSF+ ++LNA KSKFAQFVMFYAC+LDPENC VRFA +LAD F+ +T  PL RMSA
Sbjct: 313  ETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMSA 372

Query: 1034 VAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVM 855
            VAYLASYLSRG+FL  + VA+ L+RLV WC EYCK   I +   NP  H+VFYSGCQA+M
Sbjct: 373  VAYLASYLSRGKFLTASFVANILERLVVWCLEYCK---IHDGDINPKAHQVFYSGCQAIM 429

Query: 854  YVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVS 675
            YVLCFRMR MM+VPHL+SQLL +PLE IL+  L PLKVCLPSIV EFLRQAKAA+LFTVS
Sbjct: 430  YVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVS 489

Query: 674  ENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXX 498
            E F F+DLLES+LS+ +GGIERLDMFFP+DPCLLK CDR+IRPNF+YWSM++T Y     
Sbjct: 490  ETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYD---- 545

Query: 497  XXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSI 318
                             DG      +++                 ++SMNKMSITPK S+
Sbjct: 546  -----------------DG------EDSSDEEPAEDYEASHPDDFDHSMNKMSITPKNSL 582

Query: 317  KNRFPAGVQRPTQMPARIRPSTSPESL 237
              RF  G +   QMP+RIRPSTSPESL
Sbjct: 583  YYRF--GDELKVQMPSRIRPSTSPESL 607


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  595 bits (1534), Expect = e-167
 Identities = 324/567 (57%), Positives = 392/567 (69%), Gaps = 2/567 (0%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLL 1752
            H SLL SIFGMSMWNY  D+MDAL  LI SLAAS+GK+   CL MLV NF PP  FL  L
Sbjct: 84   HESLLVSIFGMSMWNYDPDIMDALKGLIISLAASSGKYVDSCLTMLVGNFTPPSYFLDKL 143

Query: 1751 SQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFL 1572
             +P G+ RK QVL RVH+AL  I DLVPL P+ L  IV Q +P + +K+      LK+ +
Sbjct: 144  KEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKH----ERLKLIV 199

Query: 1571 QKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMEL 1392
                +Y ENML+LES A+G+ +   +L  VV RL++LD+EI WD+IL DD SKGIF+MEL
Sbjct: 200  ----VYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMEL 255

Query: 1391 EDIDEDAEYDENDTD-LPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVF 1215
            ED++E A+  E   D LP      +    ++ AE LD+L+VLT EH++SC   GRL EVF
Sbjct: 256  EDVEEAADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEVF 315

Query: 1214 ETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSA 1035
            E LL SF+ ++LNA+KSKFAQFVMFYAC+LDPENC +RFA MLAD F+     PLTRMS+
Sbjct: 316  EILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSS 375

Query: 1034 VAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVM 855
            V+YLASYLSR RFL    + S LKRLVDWC EYC    I     NP  HRVFYSGCQA+M
Sbjct: 376  VSYLASYLSRARFLSPCFIVSLLKRLVDWCLEYC---NIPGGNINPKAHRVFYSGCQAIM 432

Query: 854  YVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVS 675
            YVLCFRMR +MDVP LKSQLL MPLE +L+ +L+PLKVCLPS+V+EFL+Q+KAA+LFTVS
Sbjct: 433  YVLCFRMRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVS 492

Query: 674  ENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXX 498
            E F FNDLLES+LS+ +GG+ERLDMFFP+DPCLLK  D +IRPNF+YWSMVKTAY     
Sbjct: 493  ETFIFNDLLESELSRDFGGLERLDMFFPFDPCLLKKSDSFIRPNFIYWSMVKTAYHGDEE 552

Query: 497  XXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSI 318
                            VDG         MGRS               S+NKMSITPK S 
Sbjct: 553  DNSDEDVDEDNGDHVMVDG---------MGRSPDEQDLDLDEFEY--SLNKMSITPKNSF 601

Query: 317  KNRFPAGVQRPTQMPARIRPSTSPESL 237
              R    +++P +MP+RIRPSTSPESL
Sbjct: 602  SCRLDGELRQPMKMPSRIRPSTSPESL 628


>ref|XP_010033606.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3 [Eucalyptus grandis] gi|629086945|gb|KCW53302.1|
            hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis]
          Length = 633

 Score =  595 bits (1533), Expect = e-167
 Identities = 314/567 (55%), Positives = 397/567 (70%), Gaps = 2/567 (0%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLL 1752
            H SLLSSIFGMSMWNY  +VMDAL +LI SLAAS+GK+   CLDML+ NFVPP+S+L LL
Sbjct: 84   HESLLSSIFGMSMWNYGPEVMDALVDLIISLAASSGKYVDSCLDMLIRNFVPPYSYLALL 143

Query: 1751 SQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFL 1572
             QPRG++RK+QVL RVHSAL  I  LVPL P+ L  +V Q +P         +       
Sbjct: 144  KQPRGLSRKDQVLSRVHSALESIGHLVPLAPMRLLSLVVQRMPRQYDNEAVIMT------ 197

Query: 1571 QKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMEL 1392
                 YVENM +LESG++G+ +G  ML+ VV RL++LD+EI W++ILQ+D SKGIF+MEL
Sbjct: 198  -----YVENMFKLESGSMGQLVGSTMLTAVVDRLLDLDLEIGWEDILQEDSSKGIFEMEL 252

Query: 1391 EDIDEDAE-YDENDTDLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVF 1215
            ED++ED E +++   +LP           +I AEKLD+L+VLT E+++SC   GRL EVF
Sbjct: 253  EDLEEDEEDWNDEGGELPGKHLSRNSLRGNIIAEKLDSLLVLTFEYLESCQGRGRLLEVF 312

Query: 1214 ETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSA 1035
            ETLL SF  ++LNA+KSKF+QFVMFYAC+LDPENC VRFA ML D F+     P TRMSA
Sbjct: 313  ETLLHSFRITVLNAYKSKFSQFVMFYACALDPENCGVRFARMLLDIFVCHDHPPNTRMSA 372

Query: 1034 VAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVM 855
            VAYLASYLSRG+FL  + + + LKRLVDWC +YCK+Q   ++  NPL HRVFY+GCQA+M
Sbjct: 373  VAYLASYLSRGKFLSTSYITTMLKRLVDWCLDYCKVQ---DEDVNPLAHRVFYAGCQAIM 429

Query: 854  YVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVS 675
            YVLCFRM  MM +P LKSQL  MP+E IL+   DPLKVCLPS+V EFL+QA+AA+LFTVS
Sbjct: 430  YVLCFRMWSMMSIPRLKSQLFLMPIETILKHKSDPLKVCLPSVVGEFLKQARAARLFTVS 489

Query: 674  E-NFFNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXX 498
            + +  +D+LE++LS+ +GG+ERLD FFP+DPCLLK  DR+IRPNF++WSMVKT Y     
Sbjct: 490  KTSISDDILETELSRAFGGLERLDTFFPFDPCLLKKSDRFIRPNFIFWSMVKTTYDDDED 549

Query: 497  XXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSI 318
                            VDG  E   D   G +             + ++NKMSITPK S 
Sbjct: 550  EDEDAEGSSDEDGEESVDGAVENRGD---GMATSFDERDIDMEEFDYALNKMSITPKQSS 606

Query: 317  KNRFPAGVQRPTQMPARIRPSTSPESL 237
              RF +G+    +MP+RIRPSTSPESL
Sbjct: 607  MYRFGSGLDELVRMPSRIRPSTSPESL 633


>ref|XP_010088711.1| hypothetical protein L484_016497 [Morus notabilis]
            gi|587846406|gb|EXB36892.1| hypothetical protein
            L484_016497 [Morus notabilis]
          Length = 616

 Score =  592 bits (1527), Expect = e-166
 Identities = 328/571 (57%), Positives = 400/571 (70%), Gaps = 2/571 (0%)
 Frame = -2

Query: 1943 DNDCHSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSF 1764
            D+  H SLLSSIF M+MWNY  DVMDAL ELI SLAASNG +   CLDMLV NF PP+ F
Sbjct: 80   DSVLHESLLSSIFSMNMWNYRPDVMDALLELIISLAASNGTYIDSCLDMLVGNFTPPNYF 139

Query: 1763 LPLLSQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAML 1584
              +L QPRGIARK+QVL RVHS+L  +ADLVPL+P+ L  I+ Q  PH  SK        
Sbjct: 140  TDMLKQPRGIARKDQVLSRVHSSLKVLADLVPLSPMRLLPIIIQRKPHYCSK-------- 191

Query: 1583 KIFLQKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIF 1404
            +I L    IYVENML+LESG  G+ +G  MLS +V  L++LDVEI WD+ILQD+ +KGIF
Sbjct: 192  EIILV---IYVENMLKLESGIFGELVGSAMLSGLVDLLLDLDVEIGWDDILQDESAKGIF 248

Query: 1403 DMELEDIDEDAEYDENDT-DLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRL 1227
             MELED+DED + +  D  +LP+        G ++FA KLD+LMVL  EH++SC    RL
Sbjct: 249  SMELEDVDEDIDDELMDGGELPRELSRKSLVG-NLFARKLDSLMVLIFEHLESCEVGRRL 307

Query: 1226 FEVFETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLT 1047
             EVFETLL  F+ ++L A+KSKF+QFVMFYAC+LDPENC VRFA ML DTF+  +  PL 
Sbjct: 308  VEVFETLLQPFQKTVLTAYKSKFSQFVMFYACALDPENCGVRFANMLGDTFISNSHPPLL 367

Query: 1046 RMSAVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGC 867
            RMSAVAYLASYLSRG+FL  +L+A TLKRLVDWC +YC +QE E    NP  HR+FYSGC
Sbjct: 368  RMSAVAYLASYLSRGKFLSTSLIADTLKRLVDWCLDYCTIQEGE---INPKAHRIFYSGC 424

Query: 866  QAVMYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKL 687
            QA+MY LCFRMR +M VP  KSQLL MP+  IL   L PLKVCLPSIVTEFLRQ+KAA L
Sbjct: 425  QAIMYALCFRMRSIMGVPWFKSQLL-MPINLILSHKLSPLKVCLPSIVTEFLRQSKAAGL 483

Query: 686  FTVSENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYX 510
            F  SE F F+D LES+LSK +GG+ERLDMFFP+DPCLLK CD +IRP ++YWSMV+  Y 
Sbjct: 484  FITSERFNFDDYLESELSKGFGGMERLDMFFPFDPCLLKRCDSFIRPYYVYWSMVRPTY- 542

Query: 509  XXXXXXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITP 330
                              G  +G+ E   +  +G               +++MN+MSITP
Sbjct: 543  ----------------DDGQEEGSDEEVDEAPLG-GNTKSREDFDLDEFDSAMNQMSITP 585

Query: 329  KTSIKNRFPAGVQRPTQMPARIRPSTSPESL 237
            K S+K+RF A ++ P +MP+RIRPSTSPESL
Sbjct: 586  KDSLKHRFGAALKEPLRMPSRIRPSTSPESL 616


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  592 bits (1526), Expect = e-166
 Identities = 323/567 (56%), Positives = 390/567 (68%), Gaps = 2/567 (0%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLL 1752
            H SLL SIFGMSMWNY  DVMDAL  LI SLAASNGK+   CL MLV NF PP  FL  L
Sbjct: 84   HESLLVSIFGMSMWNYDPDVMDALKGLIISLAASNGKYVDSCLTMLVSNFTPPSYFLDKL 143

Query: 1751 SQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFL 1572
             +P G+ RK QVL RVH+AL  I DLVPL P  L  IV Q +P + +K+      LK+ +
Sbjct: 144  KEPHGLERKHQVLSRVHAALKSIFDLVPLAPTRLLPIVVQRMPTVHNKH----ERLKMIV 199

Query: 1571 QKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMEL 1392
                +Y ENML+LES A+G+ +   +L  VV RL++LD+EI WD+IL DD SKGIF+MEL
Sbjct: 200  ----VYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMEL 255

Query: 1391 EDIDEDAEYDENDTD-LPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVF 1215
            ED++E A+  E   D LP      +    ++ AE LD+LMVLT EH++SC   GRL EVF
Sbjct: 256  EDVEEAADDAEQVGDELPSGSLSRKSLSGNLIAELLDSLMVLTFEHLESCEGTGRLIEVF 315

Query: 1214 ETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSA 1035
            E LL SF+ ++LNA+KSKFAQFVMFYAC+LDPENC +RFA MLAD F+     PLTRMSA
Sbjct: 316  EILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSA 375

Query: 1034 VAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVM 855
            V+YLAS+LSR RFL    + S LKRLVDWC EYC +   +    NP  HRVFYSGCQA+M
Sbjct: 376  VSYLASFLSRARFLSPCFIVSLLKRLVDWCLEYCNILGGD---INPKAHRVFYSGCQAIM 432

Query: 854  YVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVS 675
            YVLCFRMR +MD+P LKSQLL MPLE +L+  L+PLKVCLPS+V+EFL+Q+KAA+LFTVS
Sbjct: 433  YVLCFRMRSIMDIPRLKSQLLLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVS 492

Query: 674  ENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXX 498
            E F FNDLLES+LS+ +GG+ERLDMFFP+DPCLLK  D +IRPNF+YWSMVKTAY     
Sbjct: 493  ETFVFNDLLESELSRAFGGLERLDMFFPFDPCLLKKSDSFIRPNFVYWSMVKTAYHGDEE 552

Query: 497  XXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSI 318
                            VDG         +GRS               S+NKMSITPK S 
Sbjct: 553  DNSDEDVDEDNGDHVMVDG---------VGRSPDEQDLDLDEFEY--SLNKMSITPKNSF 601

Query: 317  KNRFPAGVQRPTQMPARIRPSTSPESL 237
              R    +++P +MP+RIRPS SPESL
Sbjct: 602  SCRLDGELRQPMKMPSRIRPSMSPESL 628


>gb|KCW53301.1| hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis]
          Length = 634

 Score =  590 bits (1521), Expect = e-165
 Identities = 314/568 (55%), Positives = 397/568 (69%), Gaps = 3/568 (0%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSL-AASNGKFARQCLDMLVLNFVPPHSFLPL 1755
            H SLLSSIFGMSMWNY  +VMDAL +LI SL AAS+GK+   CLDML+ NFVPP+S+L L
Sbjct: 84   HESLLSSIFGMSMWNYGPEVMDALVDLIISLQAASSGKYVDSCLDMLIRNFVPPYSYLAL 143

Query: 1754 LSQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIF 1575
            L QPRG++RK+QVL RVHSAL  I  LVPL P+ L  +V Q +P         +      
Sbjct: 144  LKQPRGLSRKDQVLSRVHSALESIGHLVPLAPMRLLSLVVQRMPRQYDNEAVIMT----- 198

Query: 1574 LQKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDME 1395
                  YVENM +LESG++G+ +G  ML+ VV RL++LD+EI W++ILQ+D SKGIF+ME
Sbjct: 199  ------YVENMFKLESGSMGQLVGSTMLTAVVDRLLDLDLEIGWEDILQEDSSKGIFEME 252

Query: 1394 LEDIDEDAE-YDENDTDLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEV 1218
            LED++ED E +++   +LP           +I AEKLD+L+VLT E+++SC   GRL EV
Sbjct: 253  LEDLEEDEEDWNDEGGELPGKHLSRNSLRGNIIAEKLDSLLVLTFEYLESCQGRGRLLEV 312

Query: 1217 FETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMS 1038
            FETLL SF  ++LNA+KSKF+QFVMFYAC+LDPENC VRFA ML D F+     P TRMS
Sbjct: 313  FETLLHSFRITVLNAYKSKFSQFVMFYACALDPENCGVRFARMLLDIFVCHDHPPNTRMS 372

Query: 1037 AVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAV 858
            AVAYLASYLSRG+FL  + + + LKRLVDWC +YCK+Q   ++  NPL HRVFY+GCQA+
Sbjct: 373  AVAYLASYLSRGKFLSTSYITTMLKRLVDWCLDYCKVQ---DEDVNPLAHRVFYAGCQAI 429

Query: 857  MYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTV 678
            MYVLCFRM  MM +P LKSQL  MP+E IL+   DPLKVCLPS+V EFL+QA+AA+LFTV
Sbjct: 430  MYVLCFRMWSMMSIPRLKSQLFLMPIETILKHKSDPLKVCLPSVVGEFLKQARAARLFTV 489

Query: 677  SE-NFFNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXX 501
            S+ +  +D+LE++LS+ +GG+ERLD FFP+DPCLLK  DR+IRPNF++WSMVKT Y    
Sbjct: 490  SKTSISDDILETELSRAFGGLERLDTFFPFDPCLLKKSDRFIRPNFIFWSMVKTTYDDDE 549

Query: 500  XXXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTS 321
                             VDG  E   D   G +             + ++NKMSITPK S
Sbjct: 550  DEDEDAEGSSDEDGEESVDGAVENRGD---GMATSFDERDIDMEEFDYALNKMSITPKQS 606

Query: 320  IKNRFPAGVQRPTQMPARIRPSTSPESL 237
               RF +G+    +MP+RIRPSTSPESL
Sbjct: 607  SMYRFGSGLDELVRMPSRIRPSTSPESL 634


>gb|KCW53303.1| hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis]
          Length = 609

 Score =  584 bits (1505), Expect = e-163
 Identities = 308/560 (55%), Positives = 391/560 (69%), Gaps = 2/560 (0%)
 Frame = -2

Query: 1910 IFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLLSQPRGIA 1731
            IFGMSMWNY  +VMDAL +LI SLAAS+GK+   CLDML+ NFVPP+S+L LL QPRG++
Sbjct: 67   IFGMSMWNYGPEVMDALVDLIISLAASSGKYVDSCLDMLIRNFVPPYSYLALLKQPRGLS 126

Query: 1730 RKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFLQKNEIYV 1551
            RK+QVL RVHSAL  I  LVPL P+ L  +V Q +P         +            YV
Sbjct: 127  RKDQVLSRVHSALESIGHLVPLAPMRLLSLVVQRMPRQYDNEAVIMT-----------YV 175

Query: 1550 ENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMELEDIDEDA 1371
            ENM +LESG++G+ +G  ML+ VV RL++LD+EI W++ILQ+D SKGIF+MELED++ED 
Sbjct: 176  ENMFKLESGSMGQLVGSTMLTAVVDRLLDLDLEIGWEDILQEDSSKGIFEMELEDLEEDE 235

Query: 1370 E-YDENDTDLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVFETLLLSF 1194
            E +++   +LP           +I AEKLD+L+VLT E+++SC   GRL EVFETLL SF
Sbjct: 236  EDWNDEGGELPGKHLSRNSLRGNIIAEKLDSLLVLTFEYLESCQGRGRLLEVFETLLHSF 295

Query: 1193 ENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSAVAYLASY 1014
              ++LNA+KSKF+QFVMFYAC+LDPENC VRFA ML D F+     P TRMSAVAYLASY
Sbjct: 296  RITVLNAYKSKFSQFVMFYACALDPENCGVRFARMLLDIFVCHDHPPNTRMSAVAYLASY 355

Query: 1013 LSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVMYVLCFRM 834
            LSRG+FL  + + + LKRLVDWC +YCK+Q   ++  NPL HRVFY+GCQA+MYVLCFRM
Sbjct: 356  LSRGKFLSTSYITTMLKRLVDWCLDYCKVQ---DEDVNPLAHRVFYAGCQAIMYVLCFRM 412

Query: 833  RWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVSE-NFFND 657
              MM +P LKSQL  MP+E IL+   DPLKVCLPS+V EFL+QA+AA+LFTVS+ +  +D
Sbjct: 413  WSMMSIPRLKSQLFLMPIETILKHKSDPLKVCLPSVVGEFLKQARAARLFTVSKTSISDD 472

Query: 656  LLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXXXXXXXXX 477
            +LE++LS+ +GG+ERLD FFP+DPCLLK  DR+IRPNF++WSMVKT Y            
Sbjct: 473  ILETELSRAFGGLERLDTFFPFDPCLLKKSDRFIRPNFIFWSMVKTTYDDDEDEDEDAEG 532

Query: 476  XXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSIKNRFPAG 297
                     VDG  E   D   G +             + ++NKMSITPK S   RF +G
Sbjct: 533  SSDEDGEESVDGAVENRGD---GMATSFDERDIDMEEFDYALNKMSITPKQSSMYRFGSG 589

Query: 296  VQRPTQMPARIRPSTSPESL 237
            +    +MP+RIRPSTSPESL
Sbjct: 590  LDELVRMPSRIRPSTSPESL 609


>ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  580 bits (1496), Expect = e-162
 Identities = 316/557 (56%), Positives = 384/557 (68%), Gaps = 2/557 (0%)
 Frame = -2

Query: 1901 MSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLLSQPRGIARKE 1722
            MSMWNY  D+MDAL  LI SLAAS+GK+   CL MLV NF PP  FL  L +P G+ RK 
Sbjct: 1    MSMWNYDPDIMDALKGLIISLAASSGKYVDSCLTMLVGNFTPPSYFLDKLKEPHGLERKH 60

Query: 1721 QVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFLQKNEIYVENM 1542
            QVL RVH+AL  I DLVPL P+ L  IV Q +P + +K+      LK+ +    +Y ENM
Sbjct: 61   QVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKH----ERLKLIV----VYTENM 112

Query: 1541 LRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMELEDIDEDAEYD 1362
            L+LES A+G+ +   +L  VV RL++LD+EI WD+IL DD SKGIF+MELED++E A+  
Sbjct: 113  LKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDA 172

Query: 1361 ENDTD-LPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVFETLLLSFENS 1185
            E   D LP      +    ++ AE LD+L+VLT EH++SC   GRL EVFE LL SF+ +
Sbjct: 173  EQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEVFEILLQSFQIT 232

Query: 1184 ILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSAVAYLASYLSR 1005
            +LNA+KSKFAQFVMFYAC+LDPENC +RFA MLAD F+     PLTRMS+V+YLASYLSR
Sbjct: 233  VLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSSVSYLASYLSR 292

Query: 1004 GRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVMYVLCFRMRWM 825
             RFL    + S LKRLVDWC EYC    I     NP  HRVFYSGCQA+MYVLCFRMR +
Sbjct: 293  ARFLSPCFIVSLLKRLVDWCLEYC---NIPGGNINPKAHRVFYSGCQAIMYVLCFRMRSI 349

Query: 824  MDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVSENF-FNDLLE 648
            MDVP LKSQLL MPLE +L+ +L+PLKVCLPS+V+EFL+Q+KAA+LFTVSE F FNDLLE
Sbjct: 350  MDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVSETFIFNDLLE 409

Query: 647  SDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXXXXXXXXXXXX 468
            S+LS+ +GG+ERLDMFFP+DPCLLK  D +IRPNF+YWSMVKTAY               
Sbjct: 410  SELSRDFGGLERLDMFFPFDPCLLKKSDSFIRPNFIYWSMVKTAYHGDEEDNSDEDVDED 469

Query: 467  XXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSIKNRFPAGVQR 288
                  VDG         MGRS               S+NKMSITPK S   R    +++
Sbjct: 470  NGDHVMVDG---------MGRSPDEQDLDLDEFEY--SLNKMSITPKNSFSCRLDGELRQ 518

Query: 287  PTQMPARIRPSTSPESL 237
            P +MP+RIRPSTSPESL
Sbjct: 519  PMKMPSRIRPSTSPESL 535


>ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  577 bits (1488), Expect = e-161
 Identities = 315/557 (56%), Positives = 382/557 (68%), Gaps = 2/557 (0%)
 Frame = -2

Query: 1901 MSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLLSQPRGIARKE 1722
            MSMWNY  DVMDAL  LI SLAASNGK+   CL MLV NF PP  FL  L +P G+ RK 
Sbjct: 1    MSMWNYDPDVMDALKGLIISLAASNGKYVDSCLTMLVSNFTPPSYFLDKLKEPHGLERKH 60

Query: 1721 QVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFLQKNEIYVENM 1542
            QVL RVH+AL  I DLVPL P  L  IV Q +P + +K+      LK+ +    +Y ENM
Sbjct: 61   QVLSRVHAALKSIFDLVPLAPTRLLPIVVQRMPTVHNKH----ERLKMIV----VYTENM 112

Query: 1541 LRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDMELEDIDEDAEYD 1362
            L+LES A+G+ +   +L  VV RL++LD+EI WD+IL DD SKGIF+MELED++E A+  
Sbjct: 113  LKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDA 172

Query: 1361 ENDTD-LPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFEVFETLLLSFENS 1185
            E   D LP      +    ++ AE LD+LMVLT EH++SC   GRL EVFE LL SF+ +
Sbjct: 173  EQVGDELPSGSLSRKSLSGNLIAELLDSLMVLTFEHLESCEGTGRLIEVFEILLQSFQIT 232

Query: 1184 ILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRMSAVAYLASYLSR 1005
            +LNA+KSKFAQFVMFYAC+LDPENC +RFA MLAD F+     PLTRMSAV+YLAS+LSR
Sbjct: 233  VLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSAVSYLASFLSR 292

Query: 1004 GRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQAVMYVLCFRMRWM 825
             RFL    + S LKRLVDWC EYC +   +    NP  HRVFYSGCQA+MYVLCFRMR +
Sbjct: 293  ARFLSPCFIVSLLKRLVDWCLEYCNILGGD---INPKAHRVFYSGCQAIMYVLCFRMRSI 349

Query: 824  MDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFTVSENF-FNDLLE 648
            MD+P LKSQLL MPLE +L+  L+PLKVCLPS+V+EFL+Q+KAA+LFTVSE F FNDLLE
Sbjct: 350  MDIPRLKSQLLLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVSETFVFNDLLE 409

Query: 647  SDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXXXXXXXXXXXXXX 468
            S+LS+ +GG+ERLDMFFP+DPCLLK  D +IRPNF+YWSMVKTAY               
Sbjct: 410  SELSRAFGGLERLDMFFPFDPCLLKKSDSFIRPNFVYWSMVKTAYHGDEEDNSDEDVDED 469

Query: 467  XXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPKTSIKNRFPAGVQR 288
                  VDG         +GRS               S+NKMSITPK S   R    +++
Sbjct: 470  NGDHVMVDG---------VGRSPDEQDLDLDEFEY--SLNKMSITPKNSFSCRLDGELRQ 518

Query: 287  PTQMPARIRPSTSPESL 237
            P +MP+RIRPS SPESL
Sbjct: 519  PMKMPSRIRPSMSPESL 535


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3 [Cucumis sativus] gi|778677206|ref|XP_011650750.1|
            PREDICTED: RNA polymerase I-specific transcription
            initiation factor RRN3 [Cucumis sativus]
            gi|700201379|gb|KGN56512.1| hypothetical protein
            Csa_3G122360 [Cucumis sativus]
          Length = 626

 Score =  570 bits (1469), Expect = e-159
 Identities = 307/568 (54%), Positives = 396/568 (69%), Gaps = 5/568 (0%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLL 1752
            H SLL++IF MS+W+Y ++VMDAL ELI SLA SNGK+   CLDMLV NF+PP+S++ LL
Sbjct: 84   HESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDLL 143

Query: 1751 SQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFL 1572
             +P G+ RKE+VL RVH+AL DI+DLVPL P+ L     Q + H M +         +F 
Sbjct: 144  KKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLE----QKVVHKMQR---------VFF 190

Query: 1571 QKN--EIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDM 1398
             ++   IYVENMLRLE GAL +++G+++L+ +V +L++LDVEI WD+ILQDD SKGIF+M
Sbjct: 191  NESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEM 250

Query: 1397 ELEDIDEDAE-YDENDTDLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFE 1221
            ELED D+  +  +E+ ++LP+     +  G ++ AE LD+L+VLT EH++SC  +GRL E
Sbjct: 251  ELEDDDDTTDDINEDSSELPRE-LSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNE 309

Query: 1220 VFETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRM 1041
            VF+ LLLSF+ ++L A+KSKFAQF++FYACSLDPE C  RFA  LAD F+     PL RM
Sbjct: 310  VFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVSCNDPPLIRM 369

Query: 1040 SAVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQA 861
            SAV+YLAS+LSRG+FL  +LV + LKRLVDWC EY K   ++   PNP  H+VFYSGCQA
Sbjct: 370  SAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVD---PNPKAHKVFYSGCQA 426

Query: 860  VMYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFT 681
            +MYVLCFRMR ++++P LKSQLL MP+  +L   L PLKVCLPSIV EFLRQAK A LFT
Sbjct: 427  IMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFT 486

Query: 680  VSENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXX 504
             SENF FN LLESD S+++GG+ERLDMFFP+DPCLLK CDRY+RP+F+YWSMV+  Y   
Sbjct: 487  PSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYDEE 546

Query: 503  XXXXXXXXXXXXXXXVGFVDGNSECFF-DETMGRSXXXXXXXXXXXXXENSMNKMSITPK 327
                             F D   E    DE M  S             ++ +NKMSITP+
Sbjct: 547  EEEEEDDGGSSDEDAEIFPDRIDENLMDDEAMAIS-----YDDQDFDLDSGLNKMSITPR 601

Query: 326  TSIKNRFPAGVQRPTQMPARIRPSTSPE 243
             S++ R         QMP+RIRPS SPE
Sbjct: 602  NSLQYRCDF-----VQMPSRIRPSMSPE 624


>ref|XP_012067216.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3 isoform X2 [Jatropha curcas]
          Length = 610

 Score =  569 bits (1467), Expect = e-159
 Identities = 319/572 (55%), Positives = 391/572 (68%), Gaps = 3/572 (0%)
 Frame = -2

Query: 1943 DNDCHSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSF 1764
            DN  H SLLSSIFGMSMWNY  DVMDAL EL+ SLAASN K+   CL+MLV NFVPP   
Sbjct: 59   DNIYHESLLSSIFGMSMWNYGPDVMDALLELVISLAASNVKYVDACLEMLVGNFVPPMYL 118

Query: 1763 LPLLSQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAML 1584
            + +L QPRG  +K+QVL RVH+AL DIA LVP+  + L+ +V   +P    K+     + 
Sbjct: 119  VDVLKQPRGHGKKDQVLSRVHTALQDIAALVPMAALRLSNVVVHRMPTTYKKDLETDRL- 177

Query: 1583 KIFLQKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIF 1404
                 + EIYVENMLRLESGA+ +++G +M+  VV  LVELDV I WD+IL+DD SKGIF
Sbjct: 178  ---KYRTEIYVENMLRLESGAIREFVGNRMIMAVVDMLVELDVAIGWDDILRDDSSKGIF 234

Query: 1403 DMELEDIDEDAEYDENDT-DLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRL 1227
             +ELE+ D  ++ +END  + P+     +  G ++ A+ LD LMV T EH++ C++  RL
Sbjct: 235  AIELEEGDIGSDDEENDIGEFPRTSTH-KSLGKNVVADLLDGLMVQTFEHLELCANNKRL 293

Query: 1226 FEVFETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLT 1047
             EVFETLL SF  +ILN +KSKF+QFV+FYACSLDPENC ++FA  LAD F++   +PLT
Sbjct: 294  SEVFETLLDSFMITILNTYKSKFSQFVLFYACSLDPENCGLKFARTLADRFVYG-DNPLT 352

Query: 1046 RMSAVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGC 867
            RMS+VAYLASYL+R +FL +  VA+TLKRLVDWC EYCK Q   +   NP  HRVFYSGC
Sbjct: 353  RMSSVAYLASYLARAKFLSSAFVANTLKRLVDWCLEYCKTQ---DGHMNPKAHRVFYSGC 409

Query: 866  QAVMYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKL 687
            QA+MYVLCFRMR +MDVP LKS LL  P+E IL+  LDPLKVCLPSIV EFL+QAKAA L
Sbjct: 410  QAIMYVLCFRMRSIMDVPGLKSHLLLKPMELILKHKLDPLKVCLPSIVEEFLKQAKAAHL 469

Query: 686  FTVSENFFN-DLLESDLSKTYGGIERLDMFFPYDPCLLKNCDR-YIRPNFLYWSMVKTAY 513
            FT  E F + DLLES+ S+ +GG+ERLDMFFP+DPCLLK CDR +IRPNF+YW  V+T Y
Sbjct: 470  FTTPETFISEDLLESEFSREFGGLERLDMFFPFDPCLLKTCDRNFIRPNFVYWKHVRTTY 529

Query: 512  XXXXXXXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSIT 333
                                F   N E   +E MGRS               +MNKMSIT
Sbjct: 530  GSDQEDSSDEDIADE-----FDTMNGESLMEEGMGRSFDEDLDLDEFDC---AMNKMSIT 581

Query: 332  PKTSIKNRFPAGVQRPTQMPARIRPSTSPESL 237
            PK  +  RF        QMP+RIRPSTSPESL
Sbjct: 582  PKNGLNYRFGGD---NMQMPSRIRPSTSPESL 610


>ref|XP_012067215.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3 isoform X1 [Jatropha curcas]
            gi|643735114|gb|KDP41755.1| hypothetical protein
            JCGZ_26773 [Jatropha curcas]
          Length = 628

 Score =  569 bits (1467), Expect = e-159
 Identities = 319/572 (55%), Positives = 391/572 (68%), Gaps = 3/572 (0%)
 Frame = -2

Query: 1943 DNDCHSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSF 1764
            DN  H SLLSSIFGMSMWNY  DVMDAL EL+ SLAASN K+   CL+MLV NFVPP   
Sbjct: 77   DNIYHESLLSSIFGMSMWNYGPDVMDALLELVISLAASNVKYVDACLEMLVGNFVPPMYL 136

Query: 1763 LPLLSQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAML 1584
            + +L QPRG  +K+QVL RVH+AL DIA LVP+  + L+ +V   +P    K+     + 
Sbjct: 137  VDVLKQPRGHGKKDQVLSRVHTALQDIAALVPMAALRLSNVVVHRMPTTYKKDLETDRL- 195

Query: 1583 KIFLQKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIF 1404
                 + EIYVENMLRLESGA+ +++G +M+  VV  LVELDV I WD+IL+DD SKGIF
Sbjct: 196  ---KYRTEIYVENMLRLESGAIREFVGNRMIMAVVDMLVELDVAIGWDDILRDDSSKGIF 252

Query: 1403 DMELEDIDEDAEYDENDT-DLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRL 1227
             +ELE+ D  ++ +END  + P+     +  G ++ A+ LD LMV T EH++ C++  RL
Sbjct: 253  AIELEEGDIGSDDEENDIGEFPRTSTH-KSLGKNVVADLLDGLMVQTFEHLELCANNKRL 311

Query: 1226 FEVFETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLT 1047
             EVFETLL SF  +ILN +KSKF+QFV+FYACSLDPENC ++FA  LAD F++   +PLT
Sbjct: 312  SEVFETLLDSFMITILNTYKSKFSQFVLFYACSLDPENCGLKFARTLADRFVYG-DNPLT 370

Query: 1046 RMSAVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGC 867
            RMS+VAYLASYL+R +FL +  VA+TLKRLVDWC EYCK Q   +   NP  HRVFYSGC
Sbjct: 371  RMSSVAYLASYLARAKFLSSAFVANTLKRLVDWCLEYCKTQ---DGHMNPKAHRVFYSGC 427

Query: 866  QAVMYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKL 687
            QA+MYVLCFRMR +MDVP LKS LL  P+E IL+  LDPLKVCLPSIV EFL+QAKAA L
Sbjct: 428  QAIMYVLCFRMRSIMDVPGLKSHLLLKPMELILKHKLDPLKVCLPSIVEEFLKQAKAAHL 487

Query: 686  FTVSENFFN-DLLESDLSKTYGGIERLDMFFPYDPCLLKNCDR-YIRPNFLYWSMVKTAY 513
            FT  E F + DLLES+ S+ +GG+ERLDMFFP+DPCLLK CDR +IRPNF+YW  V+T Y
Sbjct: 488  FTTPETFISEDLLESEFSREFGGLERLDMFFPFDPCLLKTCDRNFIRPNFVYWKHVRTTY 547

Query: 512  XXXXXXXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSIT 333
                                F   N E   +E MGRS               +MNKMSIT
Sbjct: 548  GSDQEDSSDEDIADE-----FDTMNGESLMEEGMGRSFDEDLDLDEFDC---AMNKMSIT 599

Query: 332  PKTSIKNRFPAGVQRPTQMPARIRPSTSPESL 237
            PK  +  RF        QMP+RIRPSTSPESL
Sbjct: 600  PKNGLNYRFGGD---NMQMPSRIRPSTSPESL 628


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max] gi|947090729|gb|KRH39394.1|
            hypothetical protein GLYMA_09G196200 [Glycine max]
            gi|947090730|gb|KRH39395.1| hypothetical protein
            GLYMA_09G196200 [Glycine max]
          Length = 628

 Score =  565 bits (1456), Expect = e-158
 Identities = 307/571 (53%), Positives = 386/571 (67%), Gaps = 2/571 (0%)
 Frame = -2

Query: 1943 DNDCHSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSF 1764
            D+  H SLL ++  MS+WN   D+MDAL ELI SLA SNGK+   CL+MLV NFVPP   
Sbjct: 80   DSVHHESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNGKYIDWCLEMLVKNFVPPFYL 139

Query: 1763 LPLLSQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAML 1584
            L  L Q  GI RK +VL RVH+AL +IADLVPL P+ L+ IV Q +P + SK    +   
Sbjct: 140  LDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETEIV--- 196

Query: 1583 KIFLQKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIF 1404
                    +YVENMLRLESGALG+ +G  ML  +V RL+ELDVEI WD ILQ+D +KGIF
Sbjct: 197  --------MYVENMLRLESGALGETVGSTMLPALVDRLLELDVEIGWDGILQED-AKGIF 247

Query: 1403 DMELEDIDEDAEYDEN-DTDLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRL 1227
            +MELED+ E  + DEN D+ L       +    ++  EKLD+LMVL   H++SC + GRL
Sbjct: 248  EMELEDVTEFTDEDENCDSMLSSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQNSGRL 307

Query: 1226 FEVFETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLT 1047
             EVF TLL SF+ ++LNA+KSKF QFVMFYAC+LDPE C V+FA +LAD F      P+T
Sbjct: 308  AEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFGGDANPPIT 367

Query: 1046 RMSAVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGC 867
            RMSAVAYLASYL+R +FL   LV S ++ LVDWC  YCK ++ +    NP  H+VFYSGC
Sbjct: 368  RMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCYAYCKFRDFD---MNPRAHQVFYSGC 424

Query: 866  QAVMYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKL 687
            QA+MY++CFRMR +MDVP LK QLL MP+E IL+  L PLKVCLP++V EFLRQAKAA+L
Sbjct: 425  QAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQL 484

Query: 686  FTVSENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYX 510
            F  SE+F F+D+LESDLSK +GG++RLDMFFP+DPCLLK  + YIRP+F+ WS V+T Y 
Sbjct: 485  FMASESFVFDDMLESDLSKAFGGMDRLDMFFPFDPCLLKRSESYIRPHFVRWSKVRTTYD 544

Query: 509  XXXXXXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITP 330
                               F+D N++   D+ M  S                +NKMSITP
Sbjct: 545  DDDDNDEVSDSGSELSDDDFIDRNAKDMIDDDMMVSVEGADFNP-------DLNKMSITP 597

Query: 329  KTSIKNRFPAGVQRPTQMPARIRPSTSPESL 237
            + S K+ F   + + T+MPARIRPSTSPESL
Sbjct: 598  RKSFKHGFETPLNQCTRMPARIRPSTSPESL 628


>gb|KHN38852.1| RNA polymerase I-specific transcription initiation factor RRN3
            [Glycine soja]
          Length = 628

 Score =  565 bits (1455), Expect = e-158
 Identities = 306/571 (53%), Positives = 386/571 (67%), Gaps = 2/571 (0%)
 Frame = -2

Query: 1943 DNDCHSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSF 1764
            D+  H SLL ++  MS+WN   D+MDAL ELI SLA SNGK+   CL+MLV NFVPP   
Sbjct: 80   DSVHHESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNGKYIDWCLEMLVKNFVPPFYL 139

Query: 1763 LPLLSQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAML 1584
            L  L Q  GI RK +VL RVH+AL +IADLVPL P+ L+ IV Q +P + SK    +   
Sbjct: 140  LDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETEIV--- 196

Query: 1583 KIFLQKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIF 1404
                    +YVENMLRLESGALG+ +G  ML  +V RL+ELDVEI WD ILQ+D +KGIF
Sbjct: 197  --------MYVENMLRLESGALGETVGSTMLPALVDRLLELDVEIGWDGILQED-AKGIF 247

Query: 1403 DMELEDIDEDAEYDEN-DTDLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRL 1227
            +MELED+ E  + DEN D+ L       +    ++  EKLD+LMVL   H++SC + GRL
Sbjct: 248  EMELEDVTEFTDEDENCDSMLSSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQNSGRL 307

Query: 1226 FEVFETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLT 1047
             EVF TLL SF+ ++LNA+KSKF QFVMFYAC+LDPE C V+FA +LAD F      P+T
Sbjct: 308  AEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFGGDANPPIT 367

Query: 1046 RMSAVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGC 867
            RMSAVAYLASYL+R +FL   LV S ++ LVDWC  YCK ++ +    NP  H+VFYSGC
Sbjct: 368  RMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCYAYCKFRDFD---MNPRAHQVFYSGC 424

Query: 866  QAVMYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKL 687
            QA+MY++CFRMR +MDVP LK QLL MP+E IL+  L PLKVCLP++V EFLRQAKAA+L
Sbjct: 425  QAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQL 484

Query: 686  FTVSENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYX 510
            F  SE+F F+D+LESDLSK +GG++RLDMFFP+DPCLLK  + YIRP+F+ WS ++T Y 
Sbjct: 485  FMASESFVFDDMLESDLSKAFGGMDRLDMFFPFDPCLLKRSESYIRPHFVRWSKIRTTYD 544

Query: 509  XXXXXXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITP 330
                               F+D N++   D+ M  S                +NKMSITP
Sbjct: 545  DDDDNDEVSDSGSELSDDDFIDRNAKDMIDDDMMVSVEGADFNP-------DLNKMSITP 597

Query: 329  KTSIKNRFPAGVQRPTQMPARIRPSTSPESL 237
            + S K+ F   + + T+MPARIRPSTSPESL
Sbjct: 598  RKSFKHGFETPLNQCTRMPARIRPSTSPESL 628


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Glycine max]
            gi|571527491|ref|XP_006599254.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Glycine max]
            gi|947058413|gb|KRH07819.1| hypothetical protein
            GLYMA_16G112800 [Glycine max] gi|947058414|gb|KRH07820.1|
            hypothetical protein GLYMA_16G112800 [Glycine max]
          Length = 627

 Score =  561 bits (1446), Expect = e-157
 Identities = 306/571 (53%), Positives = 389/571 (68%), Gaps = 2/571 (0%)
 Frame = -2

Query: 1943 DNDCHSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSF 1764
            D+  H SLL ++  MS+WNY  D+MDAL ELI SLAASNGK+   CL+MLV +FVPP   
Sbjct: 80   DSVHHESLLFAVSRMSLWNYGIDIMDALLELIISLAASNGKYIDWCLEMLVKHFVPPFYL 139

Query: 1763 LPLLSQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAML 1584
            L  L Q  GI RK +VL RVH+AL +IADLVPL P+ L+ IV Q +P + SK    +   
Sbjct: 140  LDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETEIV--- 196

Query: 1583 KIFLQKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIF 1404
                    +YVENMLRLESGA+G+ +G  ML  +V RL+ELDVEI WD ILQ+D +KGIF
Sbjct: 197  --------MYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQED-AKGIF 247

Query: 1403 DMELEDIDEDAEYDENDTDLPKAGFGLQK-FGVDIFAEKLDTLMVLTCEHIKSCSDEGRL 1227
            +MELED+ E A+ DEN   +P +    +K    ++  EKLD+LMVL   H++SC   GRL
Sbjct: 248  EMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRL 307

Query: 1226 FEVFETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLT 1047
             EVF+TLL SF+ ++LNA+KSKF Q+VMFYAC+LDPE C V+FA +LAD F      P+T
Sbjct: 308  TEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPIT 367

Query: 1046 RMSAVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGC 867
            RMSA AYLASYL+R +FL   LV + ++ LVDWC  YCKL++ +    NP  H+VFYSGC
Sbjct: 368  RMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRDFD---MNPRAHQVFYSGC 424

Query: 866  QAVMYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKL 687
            QA+MY+LCFRMR +MD+P LK QLL MP+E IL+  L PLKVCLP++V EFLRQAKAA+L
Sbjct: 425  QAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQL 484

Query: 686  FTVSENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYX 510
            F  SE+F F+D+LESDLSK +GGI+RLDMFFP+DPCLLK  + YIRP+F+ WS V+T Y 
Sbjct: 485  FMASESFVFDDMLESDLSKAFGGIDRLDMFFPFDPCLLKKSESYIRPHFVRWSKVRTTY- 543

Query: 509  XXXXXXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITP 330
                               F+D N++   D+ M  S                +NKMSITP
Sbjct: 544  DDDDNDELSDSGSEVSDDDFIDRNTKDMIDDDMMVSVEGFDFNP-------DLNKMSITP 596

Query: 329  KTSIKNRFPAGVQRPTQMPARIRPSTSPESL 237
            + S K+ F   + +  +MPARIRPSTSPESL
Sbjct: 597  RKSFKHGFETQLNQCKRMPARIRPSTSPESL 627


>ref|XP_008438040.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3 [Cucumis melo] gi|659075244|ref|XP_008438041.1|
            PREDICTED: RNA polymerase I-specific transcription
            initiation factor RRN3 [Cucumis melo]
            gi|659075246|ref|XP_008438042.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3 [Cucumis melo] gi|659075248|ref|XP_008438044.1|
            PREDICTED: RNA polymerase I-specific transcription
            initiation factor RRN3 [Cucumis melo]
          Length = 625

 Score =  559 bits (1441), Expect = e-156
 Identities = 300/573 (52%), Positives = 396/573 (69%), Gaps = 8/573 (1%)
 Frame = -2

Query: 1931 HSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSFLPLL 1752
            H SLL++IF MS+W+Y  +VMD+L ELI SLA SNGK+   CLDMLV NF+PP+S++  L
Sbjct: 84   HESLLAAIFKMSLWDYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFL 143

Query: 1751 SQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAMLKIFL 1572
             +P G+ +K++VL RVH+AL DI+DLVPL P+ L     Q + H M +         +F 
Sbjct: 144  KKPHGLTKKDEVLSRVHTALKDISDLVPLAPLRLE----QIVVHKMQR---------VFF 190

Query: 1571 QKN--EIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIFDM 1398
            +++   IYVENMLRLE GAL +++G+++L+ +V +L++LDVEI WD+ILQDD SKGIF+M
Sbjct: 191  KESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEM 250

Query: 1397 ELEDIDEDAE-YDENDTDLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLFE 1221
            ELED DE  +  +E+ ++LP+     +  G ++ AE LD+L+VLT EH++SC  +GRL E
Sbjct: 251  ELEDDDETTDDINEDSSELPRE-LSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNE 309

Query: 1220 VFETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTRM 1041
            VF+ LLLSF+ ++L A+KSKFAQFV+FYACSLDPE C  RFA  LAD F+     PL RM
Sbjct: 310  VFDILLLSFQRTVLTAYKSKFAQFVIFYACSLDPEVCGARFAVSLADMFVSCNDPPLIRM 369

Query: 1040 SAVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQA 861
            SAV+YLAS+LSRG+FL  +LV + LKRLVDWC EY +   ++   PNP  H+VFYSGCQA
Sbjct: 370  SAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVD---PNPKAHKVFYSGCQA 426

Query: 860  VMYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLFT 681
            +MYVLCFRMR ++++P LKSQLL MP+  +L   L PLKVCLPSIV EFL+QAK A LFT
Sbjct: 427  IMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANLFT 486

Query: 680  VSENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXXX 504
             SE F FN LLES+ S+++GG+ERLDMFFP+DPCLLK CDRY+RP+F+YWSMV+  Y   
Sbjct: 487  PSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTY--- 543

Query: 503  XXXXXXXXXXXXXXXVGFVDGNSECFFD----ETMGRSXXXXXXXXXXXXXENSMNKMSI 336
                            G  D ++E F D      M                ++ +N MSI
Sbjct: 544  ------AEEEEQEEDGGSSDEDAEVFPDIIEENLMDDVAMARSYDDQDFDLDSGLNNMSI 597

Query: 335  TPKTSIKNRFPAGVQRPTQMPARIRPSTSPESL 237
            TP+ S++ R         +MP+RIRPS SPESL
Sbjct: 598  TPRNSLQYRHDF-----VKMPSRIRPSMSPESL 625


>ref|XP_007046443.1| Major facilitator superfamily protein isoform 1 [Theobroma cacao]
            gi|590701668|ref|XP_007046444.1| Major facilitator
            superfamily protein isoform 1 [Theobroma cacao]
            gi|590701672|ref|XP_007046445.1| Major facilitator
            superfamily protein isoform 1 [Theobroma cacao]
            gi|508698704|gb|EOX90600.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698705|gb|EOX90601.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698706|gb|EOX90602.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 628

 Score =  558 bits (1438), Expect = e-156
 Identities = 310/570 (54%), Positives = 380/570 (66%), Gaps = 1/570 (0%)
 Frame = -2

Query: 1943 DNDCHSSLLSSIFGMSMWNYTTDVMDALAELIKSLAASNGKFARQCLDMLVLNFVPPHSF 1764
            D   H SLLS+IF MSMWNY   V DALAELI SLA SNGK+   CL MLV NF PP  F
Sbjct: 79   DTTLHDSLLSAIFSMSMWNYGPHVADALAELIVSLAISNGKYLDLCLGMLVSNFTPPPYF 138

Query: 1763 LPLLSQPRGIARKEQVLVRVHSALNDIADLVPLTPIFLNFIVPQYIPHMMSKNGSALAML 1584
            L  L  PRG+ RK QVL  VH+A   I+D +PL P+ L+ IV Q +P +  K+ + +   
Sbjct: 139  LDKLKLPRGLERKGQVLSLVHAAFKKISDYIPLAPLRLSNIVLQGMPTIYHKDRAIV--- 195

Query: 1583 KIFLQKNEIYVENMLRLESGALGKYLGKQMLSEVVYRLVELDVEIEWDEILQDDPSKGIF 1404
                    IYVENML+LESG +G+ +G  ML  VV +L+ELD+EI WD ILQDD SKGIF
Sbjct: 196  --------IYVENMLKLESGEIGELVGSTMLMAVVDQLIELDLEIGWDAILQDDFSKGIF 247

Query: 1403 DMELEDIDEDAEYDENDTDLPKAGFGLQKFGVDIFAEKLDTLMVLTCEHIKSCSDEGRLF 1224
            +MELED+DE  E  E DT   +     +    +  AE LD L+VLT EH++SC   GRL 
Sbjct: 248  EMELEDVDEVEESAEQDTG--EFRLSRKSLAGNSIAELLDNLLVLTFEHLESCERAGRLA 305

Query: 1223 EVFETLLLSFENSILNAHKSKFAQFVMFYACSLDPENCAVRFAGMLADTFMHATTSPLTR 1044
            +VFETLL SF+ ++++A+KSKF QFVMFYAC+LDP+ C +RFA MLAD F+  +     R
Sbjct: 306  KVFETLLQSFQITVMSAYKSKFTQFVMFYACALDPDYCGMRFATMLADLFVQDSHPQPIR 365

Query: 1043 MSAVAYLASYLSRGRFLPNTLVASTLKRLVDWCSEYCKLQEIEEKRPNPLLHRVFYSGCQ 864
            MSAVAYLASYLSR +FL  +L++S LKRLVDWC EY K  + +    NP  HRVFYSGCQ
Sbjct: 366  MSAVAYLASYLSRAKFLSASLISSMLKRLVDWCLEYGKTPDGD---INPNAHRVFYSGCQ 422

Query: 863  AVMYVLCFRMRWMMDVPHLKSQLLQMPLEHILRSSLDPLKVCLPSIVTEFLRQAKAAKLF 684
            A+MYVLCFRM+  MDVP LK QLL MP+E IL+  L+PLKVCLPS+V EFLRQ+KAA LF
Sbjct: 423  AIMYVLCFRMKVFMDVPRLKMQLL-MPMEQILKHKLNPLKVCLPSVVEEFLRQSKAACLF 481

Query: 683  TVSENF-FNDLLESDLSKTYGGIERLDMFFPYDPCLLKNCDRYIRPNFLYWSMVKTAYXX 507
            TVS+ F F+ LLES+LS+ +GG+ERLD FFP+DPCLLK CD +IRP F++WSMVK  Y  
Sbjct: 482  TVSKTFVFDGLLESELSRAFGGLERLDTFFPFDPCLLKRCDSFIRPMFVFWSMVKPTYDD 541

Query: 506  XXXXXXXXXXXXXXXXVGFVDGNSECFFDETMGRSXXXXXXXXXXXXXENSMNKMSITPK 327
                              FV+ N E   D+ + RS               ++ KMSITPK
Sbjct: 542  AYDDDNDDGSSDDELIQDFVNEN-EDIMDDGVARSFDEQGLDLDEFDC--ALKKMSITPK 598

Query: 326  TSIKNRFPAGVQRPTQMPARIRPSTSPESL 237
                 +F  G Q PT+MP RIRPSTSPESL
Sbjct: 599  NGFSYKFGGGFQEPTRMPCRIRPSTSPESL 628