BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026985
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                114   1e-23
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   114   1e-23
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             100   2e-19
gb|ABB47490.1| retrotransposon protein, putative, Ty3-gypsy subc...    99   5e-19
gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Ja...    99   5e-19

>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/134 (41%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
 Frame = +1

Query: 10  KFAATNNVAEYEALISGMEMALEIGVKNLVTNSDSQLVVNQVRGDYEAKNPTLAKYKEIV 189
           KF A+NN AEYEA I+G++M +    K +   +DSQLV +Q+RG+YEA+ P + KY +++
Sbjct: 229 KFKASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMI 288

Query: 190 RDLCSKFEYWELVKIGRAENMKADKLSKIASEELKDLDHETLIEILDQPSISE-EKIMMI 366
           +DL ++    E+V + RA+N +AD LSK+AS  L+DL+   ++E+++Q SI + E+I  +
Sbjct: 289 KDLAAQLISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINCV 348

Query: 367 TSNPRCWIDVIRDY 408
           T+    W D I++Y
Sbjct: 349 TAQKE-WYDDIQEY 361


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/134 (41%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
 Frame = +1

Query: 10  KFAATNNVAEYEALISGMEMALEIGVKNLVTNSDSQLVVNQVRGDYEAKNPTLAKYKEIV 189
           KF A+NN AEYEA I+G++M +    K +   +DSQLV +Q+RG+YEA+ P + KY +++
Sbjct: 229 KFKASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMI 288

Query: 190 RDLCSKFEYWELVKIGRAENMKADKLSKIASEELKDLDHETLIEILDQPSISE-EKIMMI 366
           +DL ++    E+V + RA+N +AD LSK+AS  L+DL+   ++E+++Q SI + E+I  +
Sbjct: 289 KDLAAQLISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINCV 348

Query: 367 TSNPRCWIDVIRDY 408
           T+    W D I++Y
Sbjct: 349 TAQKE-WYDDIQEY 361


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/126 (41%), Positives = 75/126 (59%)
 Frame = +1

Query: 4   RFKFAATNNVAEYEALISGMEMALEIGVKNLVTNSDSQLVVNQVRGDYEAKNPTLAKYKE 183
           R  F A+NN AEYEALI+G+ +A  +G K ++   DSQLVVNQ  GDYEAK+  +  Y E
Sbjct: 483 RLLFDASNNEAEYEALIAGLRLAQGVGAKEILAYCDSQLVVNQFNGDYEAKDSRMEAYLE 542

Query: 184 IVRDLCSKFEYWELVKIGRAENMKADKLSKIASEELKDLDHETLIEILDQPSISEEKIMM 363
           + +DL   F  +EL++I R EN  AD L+ +AS     L     +E + + SI + K  +
Sbjct: 543 VAKDLSKNFSKFELIRILRGENTTADALAALASTSDPGLKRVIPVECISERSIQDNKETL 602

Query: 364 ITSNPR 381
           + +  R
Sbjct: 603 VITRSR 608


>gb|ABB47490.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1783

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/133 (39%), Positives = 80/133 (60%)
 Frame = +1

Query: 1    VRFKFAATNNVAEYEALISGMEMALEIGVKNLVTNSDSQLVVNQVRGDYEAKNPTLAKYK 180
            +   F ATNN AEYE L++G+  A  +GVK L+   DS+LV NQV  DY+  NP L+KY 
Sbjct: 1488 IHLNFRATNNTAEYEGLLAGIRAAAALGVKRLIVKGDSELVANQVHKDYKCSNPELSKYL 1547

Query: 181  EIVRDLCSKFEYWELVKIGRAENMKADKLSKIASEELKDLDHETLIEILDQPSISEEKIM 360
              VR L  +F+  E+  + R +N++ D L++ AS   + L+ +T +++L +PS+ E    
Sbjct: 1548 AEVRKLEKRFDGIEVRHVYRKDNVEPDDLARRASRR-EPLEPDTFLDVLTKPSVKEVSGE 1606

Query: 361  MITSNPRCWIDVI 399
            ++ S P    DVI
Sbjct: 1607 VVPSTPDISSDVI 1619


>gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Japonica Group]
          Length = 2079

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/133 (39%), Positives = 80/133 (60%)
 Frame = +1

Query: 1    VRFKFAATNNVAEYEALISGMEMALEIGVKNLVTNSDSQLVVNQVRGDYEAKNPTLAKYK 180
            +   F ATNN AEYE L++G+  A  +GVK L+   DS+LV NQV  DY+  NP L+KY 
Sbjct: 1553 IHLNFRATNNTAEYEGLLAGIRAAAALGVKRLIVKGDSELVANQVHKDYKCSNPELSKYL 1612

Query: 181  EIVRDLCSKFEYWELVKIGRAENMKADKLSKIASEELKDLDHETLIEILDQPSISEEKIM 360
              VR L  +F+  E+  + R +N++ D L++ AS   + L+ +T +++L +PS+ E    
Sbjct: 1613 AEVRKLEKRFDGIEVRHVYRKDNVEPDDLARRASRR-EPLEPDTFLDVLTKPSVKEVSGE 1671

Query: 361  MITSNPRCWIDVI 399
            ++ S P    DVI
Sbjct: 1672 VVPSTPDISSDVI 1684