BLASTX nr result
ID: Aconitum21_contig00026975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00026975
(472 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 110 5e-41
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi... 89 9e-35
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ... 88 4e-33
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,... 91 5e-31
gb|AEP33760.1| organelle transcript processing 82, partial [Caps... 92 3e-30
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 110 bits (275), Expect(2) = 5e-41
Identities = 50/87 (57%), Positives = 71/87 (81%)
Frame = -2
Query: 267 EQAAKRLIELDPRDSGSYILLSNAYASCGRYKEAMDTRSSMKEKRIRKQPGSSLIEVNGV 88
++AAK +++LD DS Y+LLSN YA+ +++EAM+ R SMKEK+I K+PG SLIEVNG
Sbjct: 446 KRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIEVNGE 505
Query: 87 VHEFVVGGTLHPKATEIHALLDDLGLM 7
+HEFV GG LHP+A E+++LL++LG+M
Sbjct: 506 IHEFVAGGRLHPQAQEVYSLLNELGMM 532
Score = 82.4 bits (202), Expect(2) = 5e-41
Identities = 38/68 (55%), Positives = 46/68 (67%)
Frame = -1
Query: 472 AKYYFTLMSEKYDIEPTIKHYGCMVDVXXXXXXXXXXXXLISKMPIKADAVIWGSLLSAC 293
AK YF+LMS+ Y IEP+IKHY CMVD LI MP+ DA+IW SLLSAC
Sbjct: 377 AKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSAC 436
Query: 292 REHGNIEM 269
R+HGN+E+
Sbjct: 437 RKHGNVEL 444
>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 89.4 bits (220), Expect(2) = 9e-35
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = -2
Query: 267 EQAAKRLIELDPRDSGSYILLSNAYASCGRYKEAMDTRSSMKEKRIRKQPGSSLIEVNGV 88
++AA+R+ EL+P D+ Y+L+SN A+ +++EAM+ R M+E+ K+PG S IE+ G
Sbjct: 445 KRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIELYGE 504
Query: 87 VHEFVVGGTLHPKATEIHALLDDLGLMLK 1
VHEF+ GG LHPKA EI+ LL+D L+
Sbjct: 505 VHEFLAGGRLHPKAREIYYLLNDSSFALQ 533
Score = 82.8 bits (203), Expect(2) = 9e-35
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = -1
Query: 472 AKYYFTLMSEKYDIEPTIKHYGCMVDVXXXXXXXXXXXXLISKMPIKADAVIWGSLLSAC 293
A+ YF+LM KY+IEP+IKHY CMV+V LI MP+KAD +IWGSLLS+C
Sbjct: 376 ARDYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSC 435
Query: 292 REHGNIEM 269
R+HGN+E+
Sbjct: 436 RKHGNVEI 443
>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 542
Score = 88.2 bits (217), Expect(2) = 4e-33
Identities = 40/82 (48%), Positives = 59/82 (71%)
Frame = -2
Query: 264 QAAKRLIELDPRDSGSYILLSNAYASCGRYKEAMDTRSSMKEKRIRKQPGSSLIEVNGVV 85
+AA+R+ EL+P D+ Y+L+SN +A+ +++EA++ R MKE K+PG S IE+ G V
Sbjct: 454 RAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEV 513
Query: 84 HEFVVGGTLHPKATEIHALLDD 19
HEF+ GG LHPK EI+ LL+D
Sbjct: 514 HEFIAGGRLHPKTQEIYHLLND 535
Score = 78.2 bits (191), Expect(2) = 4e-33
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = -1
Query: 472 AKYYFTLMSEKYDIEPTIKHYGCMVDVXXXXXXXXXXXXLISKMPIKADAVIWGSLLSAC 293
A+ YF LM KY+IEP+IKHY C+VDV LI MP+K DA+IWGSLLS+C
Sbjct: 384 ARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSC 443
Query: 292 REHGNIEM 269
R+H N+++
Sbjct: 444 RKHRNVQI 451
>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 90.9 bits (224), Expect(2) = 5e-31
Identities = 44/89 (49%), Positives = 62/89 (69%)
Frame = -2
Query: 267 EQAAKRLIELDPRDSGSYILLSNAYASCGRYKEAMDTRSSMKEKRIRKQPGSSLIEVNGV 88
++AA LIEL+P +S S++L++NAYA+ ++EA+ R ++KE I K+PG S IEV G
Sbjct: 443 KRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIEVGGE 502
Query: 87 VHEFVVGGTLHPKATEIHALLDDLGLMLK 1
VHEFV GG HP+ EI+ +LD L L K
Sbjct: 503 VHEFVAGGRAHPEIKEIYRVLDVLTLTNK 531
Score = 68.6 bits (166), Expect(2) = 5e-31
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = -1
Query: 472 AKYYFTLMSEKYDIEPTIKHYGCMVDVXXXXXXXXXXXXLISKMPIKADAVIWGSLLSAC 293
AK YF LM +KY I+P IKH+ CMVDV LI M + DA+IWGSLL +C
Sbjct: 374 AKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSC 433
Query: 292 REHGNIEM 269
++GNI+M
Sbjct: 434 CKYGNIKM 441
>gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 92.0 bits (227), Expect(2) = 3e-30
Identities = 39/89 (43%), Positives = 66/89 (74%)
Frame = -2
Query: 267 EQAAKRLIELDPRDSGSYILLSNAYASCGRYKEAMDTRSSMKEKRIRKQPGSSLIEVNGV 88
E A+ LI+++P++SGSY+LLSN YA+ GR+ E R+ + +K ++K PG S IE++ V
Sbjct: 527 ESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSV 586
Query: 87 VHEFVVGGTLHPKATEIHALLDDLGLMLK 1
VHEF++G LHP+ EI+ +L+++ ++L+
Sbjct: 587 VHEFIIGDKLHPRNREIYGMLEEMEVLLE 615
Score = 65.1 bits (157), Expect(2) = 3e-30
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = -1
Query: 469 KYYFTLMSEKYDIEPTIKHYGCMVDVXXXXXXXXXXXXLISKMPIKADAVIWGSLLSACR 290
++ F M+E Y I P ++HYGCM+D+ +I+ M + D VIW SLL AC+
Sbjct: 459 RHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACK 518
Query: 289 EHGNIEMG 266
HGN+E+G
Sbjct: 519 MHGNVELG 526