BLASTX nr result

ID: Aconitum21_contig00026973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026973
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis...    68   7e-10
emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]    68   7e-10
ref|XP_002517473.1| structure-specific recognition protein, puta...    65   6e-09
ref|XP_002324036.1| high mobility group family [Populus trichoca...    64   1e-08
ref|XP_002305370.1| high mobility group family [Populus trichoca...    64   2e-08

>ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
           gi|296082859|emb|CBI22160.3| unnamed protein product
           [Vitis vinifera]
          Length = 644

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/50 (68%), Positives = 38/50 (76%)
 Frame = +2

Query: 2   RLKNEQEYVFGNIQKIEYDNLCDFIRSKKLKIVNLGDVPTIDGVATALQN 151
           RLK EQE++F NIQ+ EY NL DFI  K LKI+NLGDV T DGVA  LQN
Sbjct: 407 RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDVQTADGVAAVLQN 456


>emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
          Length = 644

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/50 (68%), Positives = 38/50 (76%)
 Frame = +2

Query: 2   RLKNEQEYVFGNIQKIEYDNLCDFIRSKKLKIVNLGDVPTIDGVATALQN 151
           RLK EQE++F NIQ+ EY NL DFI  K LKI+NLGDV T DGVA  LQN
Sbjct: 407 RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDVQTADGVAAVLQN 456


>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
           gi|223543484|gb|EEF45015.1| structure-specific
           recognition protein, putative [Ricinus communis]
          Length = 640

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +2

Query: 2   RLKNEQEYVFGNIQKIEYDNLCDFIRSKKLKIVNLGDVPTIDGVATALQN 151
           RLK EQE++F NIQ+ EY NL DFI  K LKI+NLGD+ T +GVA  LQN
Sbjct: 407 RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTNGVAAVLQN 456


>ref|XP_002324036.1| high mobility group family [Populus trichocarpa]
           gi|222867038|gb|EEF04169.1| high mobility group family
           [Populus trichocarpa]
          Length = 610

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/50 (64%), Positives = 37/50 (74%)
 Frame = +2

Query: 2   RLKNEQEYVFGNIQKIEYDNLCDFIRSKKLKIVNLGDVPTIDGVATALQN 151
           RLK EQE++F NIQ+ EY NL DFI  K LKI+NLGD+ T  GVA  LQN
Sbjct: 406 RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMQTTKGVAAVLQN 455


>ref|XP_002305370.1| high mobility group family [Populus trichocarpa]
           gi|222848334|gb|EEE85881.1| high mobility group family
           [Populus trichocarpa]
          Length = 644

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = +2

Query: 2   RLKNEQEYVFGNIQKIEYDNLCDFIRSKKLKIVNLGDVPTIDGVATALQN 151
           RLK EQE++F NIQ+ EY NL DFI  K +KI+NLGD+ T  GVA  LQN
Sbjct: 409 RLKTEQEHLFRNIQRNEYHNLFDFISGKGMKIMNLGDMQTAKGVAAVLQN 458


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