BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026966
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|2...   245   3e-63
ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...   245   4e-63
emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]   245   4e-63
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,...   240   9e-62
ref|NP_187185.2| pentatricopeptide repeat-containing protein [Ar...   230   1e-58

>ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|222857914|gb|EEE95461.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  245 bits (626), Expect = 3e-63
 Identities = 122/183 (66%), Positives = 150/183 (81%), Gaps = 3/183 (1%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNVASAI 361
           C  M D   IF+SA ++D++SMT++L GFAQNG EEEA+Q FVKML+AG  +DSN+ SA+
Sbjct: 208 CGSMGDTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAV 267

Query: 360 LG---ADLPLTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHT 190
           LG   AD  L LG+QIHSLV+K+SF SNP+V NGLINMYSKCGDL+++ KVFSRM   ++
Sbjct: 268 LGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNS 327

Query: 189 VSWNSMIAAFARHGRGLESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQFLES 10
           VSWNSMIAAFARHG G  +LQLY EM  K VEPTDVTFLSLLHACSH+G VEKG++FL+S
Sbjct: 328 VSWNSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKS 387

Query: 9   MSK 1
           M++
Sbjct: 388 MTE 390



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 4/174 (2%)
 Frame = -2

Query: 531 MRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIV-VDSNVASAILG 355
           + DA  +FD     D +S  +M+ GF ++G  +     F +M   G   +D    + IL 
Sbjct: 8   LTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTILS 67

Query: 354 ADLPLTLG---KQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHTVS 184
           A     LG   K +H L V   F     V N LI  Y KCG     ++VF  M+ R+ ++
Sbjct: 68  ACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVIT 127

Query: 183 WNSMIAAFARHGRGLESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQ 22
           W ++I+   +     +SL+L+ EM +  VEP  +T+LS L ACS + ++ +G Q
Sbjct: 128 WTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQ 181



 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 41/144 (28%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
 Frame = -2

Query: 513 IFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNVA--SAILGAD--L 346
           +FD   E + I+ T ++ G  Q+ L  +++++FV+M   G+V  +++   S+++      
Sbjct: 116 VFDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMTN-GLVEPNSLTYLSSLMACSGLQ 174

Query: 345 PLTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHTVSWNSMIA 166
            L  G QIH  V K    S+  V + L++MYSKCG + + +++F        VS   ++A
Sbjct: 175 ALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILA 234

Query: 165 AFARHGRGLESLQLYDEMISKSVE 94
            FA++G   E++Q + +M+    E
Sbjct: 235 GFAQNGFEEEAMQFFVKMLEAGTE 258


>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  245 bits (625), Expect = 4e-63
 Identities = 123/183 (67%), Positives = 149/183 (81%), Gaps = 3/183 (1%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNVASAI 361
           C  + DA  IF+SA EVDE+SMTV+LVG AQNG EEE+IQ+FVKM+K G+V+D N+ SAI
Sbjct: 305 CGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAI 364

Query: 360 LGA---DLPLTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHT 190
           LG    D  L LGKQIHSL++KKSF SN +V+NGLINMYSKCGDL ++IK+F  M  R++
Sbjct: 365 LGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNS 424

Query: 189 VSWNSMIAAFARHGRGLESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQFLES 10
           VSWNSMIAAFARHG G  +LQLY+EM  + V PTDVTFLSLLHAC+H+G VEKG+ FLES
Sbjct: 425 VSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLES 484

Query: 9   MSK 1
           M+K
Sbjct: 485 MAK 487



 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVV--DSNVAS 367
           C  +RDA  +FD     D IS    + G   NG  E   ++F ++ ++GI     + + +
Sbjct: 102 CGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTT 161

Query: 366 AILGADLP--LTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRH 193
            +   D P    + K IHSLV    +     V N LI  Y +CG      +VF  M  ++
Sbjct: 162 VLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKN 221

Query: 192 TVSWNSMIAAFARHGRGLESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQ 22
            V+W ++I+  ++     ESL+L+ +M    V+P  +T+LS L ACS + ++ +G Q
Sbjct: 222 VVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQ 278



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNVASAI 361
           C C      +FD  +E + ++ T ++ G +Q    EE++++F KM    +  +S    + 
Sbjct: 204 CGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSS 263

Query: 360 LGADLPLTL---GKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHT 190
           L A   L     G+QIH LV K     +  + + L++MYSKCG L++A K+F        
Sbjct: 264 LMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDE 323

Query: 189 VSWNSMIAAFARHGRGLESLQLYDEMISKSV 97
           VS   ++   A++G   ES+Q++ +M+   V
Sbjct: 324 VSMTVILVGLAQNGFEEESIQVFVKMVKNGV 354



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
 Frame = -2

Query: 387 VDSNVASAILGADLPLTLGKQIHSLVVKK-SFVSNP---------YVSNGLINMYSKCGD 238
           VD +   ++ G +  L LG  +H+ ++K   F+             V N L++MYS+CG+
Sbjct: 45  VDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGE 104

Query: 237 LQEAIKVFSRMVPRHTVSWNSMIAAFARHGRGLESLQLYDEMISKSVEPTD-VTFLSLLH 61
           L++A KVF  M  + T+SWNS I+    +G      +++ ++    +   D  T  ++L 
Sbjct: 105 LRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLT 164

Query: 60  AC 55
           AC
Sbjct: 165 AC 166


>emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score =  245 bits (625), Expect = 4e-63
 Identities = 123/183 (67%), Positives = 149/183 (81%), Gaps = 3/183 (1%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNVASAI 361
           C  + DA  IF+SA EVDE+SMTV+LVG AQNG EEE+IQ+FVKM+K G+V+D N+ SAI
Sbjct: 191 CGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAI 250

Query: 360 LGA---DLPLTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHT 190
           LG    D  L LGKQIHSL++KKSF SN +V+NGLINMYSKCGDL ++IK+F  M  R++
Sbjct: 251 LGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNS 310

Query: 189 VSWNSMIAAFARHGRGLESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQFLES 10
           VSWNSMIAAFARHG G  +LQLY+EM  + V PTDVTFLSLLHAC+H+G VEKG+ FLES
Sbjct: 311 VSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLES 370

Query: 9   MSK 1
           M+K
Sbjct: 371 MAK 373



 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
 Frame = -2

Query: 489 DEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVV--DSNVASAILGADLP--LTLGKQI 322
           D IS    + G   NG  E   ++F ++ ++GI     + + + +   D P    + K I
Sbjct: 5   DTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKMI 64

Query: 321 HSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHTVSWNSMIAAFARHGRG 142
           HSLV    +     V N LI  Y +CG      +VF  M  ++ V+W ++I+  ++    
Sbjct: 65  HSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFY 124

Query: 141 LESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQ 22
            ESL+L+ +M    V+P  +T+LS L ACS + ++ +G Q
Sbjct: 125 EESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQ 164



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNVASAI 361
           C C      +FD  +E + ++ T ++ G +Q    EE++++F KM    +  +S    + 
Sbjct: 90  CGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSS 149

Query: 360 LGADLPLTL---GKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHT 190
           L A   L     G+QIH LV K     +  + + L++MYSKCG L++A K+F        
Sbjct: 150 LMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDE 209

Query: 189 VSWNSMIAAFARHGRGLESLQLYDEMISKSV 97
           VS   ++   A++G   ES+Q++ +M+   V
Sbjct: 210 VSMTVILVGLAQNGFEEESIQVFVKMVKNGV 240


>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 736

 Score =  240 bits (613), Expect = 9e-62
 Identities = 118/183 (64%), Positives = 148/183 (80%), Gaps = 3/183 (1%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNVASAI 361
           C  + DA  +F+SA E+DE+SMTV+LVGF QNG EEEAI+ FVKM+  G  VD N+ SA+
Sbjct: 137 CGSLEDARRVFESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAV 196

Query: 360 LGA---DLPLTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHT 190
           LGA   D  L LGKQIHSLV+K+S  SNP+V NGLINMYSKCG+LQE+IKVF+ +  R++
Sbjct: 197 LGACGVDTSLGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGELQESIKVFNGLTCRNS 256

Query: 189 VSWNSMIAAFARHGRGLESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQFLES 10
           VSWNSMIAAFARHG G  +L+LY+EMI +   PTD+TFLSLLHACSH+G V+KG++FL+S
Sbjct: 257 VSWNSMIAAFARHGDGFRALRLYEEMIQEGAVPTDLTFLSLLHACSHVGLVDKGMKFLKS 316

Query: 9   MSK 1
           M+K
Sbjct: 317 MTK 319



 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 7/171 (4%)
 Frame = -2

Query: 513 IFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIV-------VDSNVASAILG 355
           +FD   E + I+ T ++ G +QN + E+++ +FV+M + G++       + S  A + L 
Sbjct: 45  VFDEMLERNVITWTAIISGLSQNEMYEDSLGLFVQM-RCGLIEPNFLTYLSSLTACSGLQ 103

Query: 354 ADLPLTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHTVSWNS 175
           A   L  G+QIH LV K    SN  + + L+++YSKCG L++A +VF   V    VS   
Sbjct: 104 A---LEKGRQIHGLVWKLGIQSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTV 160

Query: 174 MIAAFARHGRGLESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQ 22
           ++  F ++G   E+++ + +M++   E       ++L AC    S+  G Q
Sbjct: 161 ILVGFTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLGACGVDTSLGLGKQ 211



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 31/110 (28%)
 Frame = -2

Query: 258 MYSKCGDLQEAIKVFSRMVPRHTVSWNSMIAAFARHGRGLESLQLYDEMISKSV------ 97
           MY KCG   +A+KVF  M  R TVSWN+M++ F R+G      Q++DEM+ ++V      
Sbjct: 1   MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAI 60

Query: 96  -------------------------EPTDVTFLSLLHACSHIGSVEKGIQ 22
                                    EP  +T+LS L ACS + ++EKG Q
Sbjct: 61  ISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQ 110


>ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g05340 gi|332640702|gb|AEE74223.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score =  230 bits (586), Expect = 1e-58
 Identities = 113/183 (61%), Positives = 142/183 (77%), Gaps = 3/183 (1%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNVASAI 361
           C  + DA  IF+S  EVDE+SMTV+LVG AQNG EEEAIQ F++ML+AG+ +D+NV SA+
Sbjct: 304 CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363

Query: 360 LGA---DLPLTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHT 190
           LG    D  L LGKQ+HSLV+K+ F  N +V+NGLINMYSKCGDL ++  VF RM  R+ 
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423

Query: 189 VSWNSMIAAFARHGRGLESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQFLES 10
           VSWNSMIAAFARHG GL +L+LY+EM +  V+PTDVTFLSLLHACSH+G ++KG + L  
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483

Query: 9   MSK 1
           M +
Sbjct: 484 MKE 486



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNV---- 373
           C C      +FD  +  + I++T ++ G  +N L E+ +++F  +++ G+V  ++V    
Sbjct: 203 CGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLS 261

Query: 372 ASAILGADLPLTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRH 193
           A A       +  G+QIH+L+ K    S   + + L++MYSKCG +++A  +F       
Sbjct: 262 ALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVD 321

Query: 192 TVSWNSMIAAFARHGRGLESLQLYDEMISKSVE 94
            VS   ++   A++G   E++Q +  M+   VE
Sbjct: 322 EVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
 Frame = -2

Query: 540 CDCMRDACCIFDSAAEVDEISMTVMLVGFAQNGLEEEAIQIFVKMLKAGIVVDSNVASAI 361
           C  + DA  +FD     D IS  ++  GF +N   E    +  +ML +G    + +   +
Sbjct: 103 CGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTIVL 162

Query: 360 LGADLP--LTLGKQIHSLVVKKSFVSNPYVSNGLINMYSKCGDLQEAIKVFSRMVPRHTV 187
              D P    + K IH+L +   +     V N LI  Y KCG       VF  M  R+ +
Sbjct: 163 SVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVI 222

Query: 186 SWNSMIAAFARHGRGLESLQLYDEMISKSVEPTDVTFLSLLHACSHIGSVEKGIQ 22
           +  ++I+    +    + L+L+  M    V P  VT+LS L ACS    + +G Q
Sbjct: 223 TLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ 277