BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026962
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containi...   211   4e-67
ref|XP_002512033.1| pentatricopeptide repeat-containing protein,...   196   5e-60
ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|2...   191   2e-58
ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containi...   185   1e-56
ref|XP_003626108.1| Pentatricopeptide repeat-containing protein ...   162   7e-48

>ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 324

 Score =  211 bits (537), Expect(2) = 4e-67
 Identities = 98/158 (62%), Positives = 125/158 (79%)
 Frame = +1

Query: 151 GLSLFREMIVNEGFIPDQLTFGSILPTCSNMGSVGLLVGKSIHGFMEKNGWDLNVQSRTA 330
           GL+LFREM+VNEG  PD++T GS+L  C+ MGS+GLLVG+SIHGF  KNGW+L+V   T 
Sbjct: 56  GLALFREMVVNEGLRPDKVTLGSVLSGCARMGSLGLLVGRSIHGFTAKNGWELSVDLGTV 115

Query: 331 LVDMYTKCGLLKVAFLIFERMKEKNVVTWSAMICGLAQHGYGEKALLVFEKMKQEGIKPN 510
           LVDMY KCG LK AF +F+ M+EKNV +W+A+ICG AQHGYG++AL +FE M+  G+KPN
Sbjct: 116 LVDMYAKCGFLKSAFRVFDLMQEKNVASWTALICGSAQHGYGKEALSMFELMQDMGVKPN 175

Query: 511 EITFTGVFSACTHTGLVEEGLKSFEDMVDEYKLEPTVQ 624
           E+TFTG+ SAC   GLVEEG K F + ++EY LEP +Q
Sbjct: 176 EMTFTGILSACAQAGLVEEGRKYF-NKIEEYGLEPRIQ 212



 Score = 70.1 bits (170), Expect(2) = 4e-67
 Identities = 31/49 (63%), Positives = 42/49 (85%)
 Frame = +3

Query: 3   RNTVTFNTMITGYSQSGDVGNARLVFDSITVKNLASWSAMISAYMYIGQ 149
           +NTVT+NTMIT YS+SGDV  ARLVF+ + +++LASWSAM++ YMY G+
Sbjct: 4   KNTVTWNTMITAYSKSGDVKKARLVFEQMPLRDLASWSAMVAGYMYGGE 52



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
 Frame = +1

Query: 82  TALLLRTSRHGLP*FLPTCISDKGLSLFREMIVNEGFIPDQLTFGSILPTCSNMGSVGLL 261
           TAL+  +++HG           + LS+F E++ + G  P+++TF  IL  C+  G V   
Sbjct: 145 TALICGSAQHGY--------GKEALSMF-ELMQDMGVKPNEMTFTGILSACAQAGLVE-- 193

Query: 262 VGKSIHGFMEKNGWDLNVQSRTALVDMYTKCGLLKVAFLIFERMK-EKNVVTWSAMICGL 438
            G+     +E+ G +  +Q    +VD++ K GLL+ A+ I   MK E NVV WS+ +   
Sbjct: 194 EGRKYFNKIEEYGLEPRIQHFGCMVDLFGKAGLLEEAYEIINSMKLEPNVVLWSSFLSSC 253

Query: 439 AQHGYGEKALLVFEKMKQEGIKP 507
             H   E A  V E++ +  +KP
Sbjct: 254 KVHKQFELAERVTEQVLRT-VKP 275



 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +1

Query: 310 NVQSRTALVDMYTKCGLLKVAFLIFERMKEKNVVTWSAMICGLAQHGYGEKALLVFEKM- 486
           N  +   ++  Y+K G +K A L+FE+M  +++ +WSAM+ G    G     L +F +M 
Sbjct: 5   NTVTWNTMITAYSKSGDVKKARLVFEQMPLRDLASWSAMVAGYMYGGEWHSGLALFREMV 64

Query: 487 KQEGIKPNEITFTGVFSACTHTG 555
             EG++P+++T   V S C   G
Sbjct: 65  VNEGLRPDKVTLGSVLSGCARMG 87


>ref|XP_002512033.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549213|gb|EEF50702.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 319

 Score =  196 bits (497), Expect(2) = 5e-60
 Identities = 91/160 (56%), Positives = 120/160 (75%)
 Frame = +1

Query: 145 DKGLSLFREMIVNEGFIPDQLTFGSILPTCSNMGSVGLLVGKSIHGFMEKNGWDLNVQSR 324
           D+GL LFREM+ N    PDQ+T G++L  C++MG +GLLVGKS HGF+ KN W+LNV+  
Sbjct: 54  DRGLLLFREMMTNSELKPDQVTVGTVLSGCTHMGFLGLLVGKSAHGFIMKNRWELNVEIG 113

Query: 325 TALVDMYTKCGLLKVAFLIFERMKEKNVVTWSAMICGLAQHGYGEKALLVFEKMKQEGIK 504
           T LVDMY KCG LK A  +F+ MKE+NV+TW+A+ICG AQHGY E+ L +F  M++  I+
Sbjct: 114 TVLVDMYVKCGYLKNAIRVFDLMKERNVMTWTALICGAAQHGYSEETLSLFNMMQEAKIR 173

Query: 505 PNEITFTGVFSACTHTGLVEEGLKSFEDMVDEYKLEPTVQ 624
           PNE+TFTG+ + C H+GLVEEG K F  M++EY LE  +Q
Sbjct: 174 PNELTFTGILNVCAHSGLVEEGKKYFR-MIEEYGLERRIQ 212



 Score = 61.6 bits (148), Expect(2) = 5e-60
 Identities = 26/49 (53%), Positives = 40/49 (81%)
 Frame = +3

Query: 3   RNTVTFNTMITGYSQSGDVGNARLVFDSITVKNLASWSAMISAYMYIGQ 149
           RNT+T+NTMITGYS+SG++  AR  F+ + ++++ SWSAMI+AY+  G+
Sbjct: 4   RNTITWNTMITGYSRSGNIDKARAFFEEMPLRDVGSWSAMITAYINHGR 52



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
 Frame = +1

Query: 82  TALLLRTSRHGLP*FLPTCISDKGLSLFREMIVNEGFIPDQLTFGSILPTCSNMGSVGLL 261
           TAL+   ++HG         S++ LSLF  M+      P++LTF  IL  C++ G V   
Sbjct: 145 TALICGAAQHGY--------SEETLSLFN-MMQEAKIRPNELTFTGILNVCAHSGLVE-- 193

Query: 262 VGKSIHGFMEKNGWDLNVQSRTALVDMYTKCGLLKVAFLIFERMK-EKNVVTWSAMICGL 438
            GK     +E+ G +  +Q    +VD++ K GLL  A+ + + MK E NVV W + +   
Sbjct: 194 EGKKYFRMIEEYGLERRIQHYGCMVDLFGKAGLLDEAYNVIKTMKVENNVVIWGSFLSAC 253

Query: 439 AQHGYGEKALLVFEKMKQEGIKP 507
            +H   + A  V E++ +  IKP
Sbjct: 254 KEHKKFDMAERVIEQVLKV-IKP 275



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
 Frame = +1

Query: 310 NVQSRTALVDMYTKCGLLKVAFLIFERMKEKNVVTWSAMICGLAQHGYGEKALLVF-EKM 486
           N  +   ++  Y++ G +  A   FE M  ++V +WSAMI     HG  ++ LL+F E M
Sbjct: 5   NTITWNTMITGYSRSGNIDKARAFFEEMPLRDVGSWSAMITAYINHGRWDRGLLLFREMM 64

Query: 487 KQEGIKPNEITFTGVFSACTHTG----LVEEGLKSFEDMVDEYKLEPTVQLILINHILK 651
               +KP+++T   V S CTH G    LV +    F  M + ++L   +  +L++  +K
Sbjct: 65  TNSELKPDQVTVGTVLSGCTHMGFLGLLVGKSAHGF-IMKNRWELNVEIGTVLVDMYVK 122


>ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|222842041|gb|EEE79588.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  191 bits (484), Expect(2) = 2e-58
 Identities = 88/160 (55%), Positives = 120/160 (75%)
 Frame = +1

Query: 145 DKGLSLFREMIVNEGFIPDQLTFGSILPTCSNMGSVGLLVGKSIHGFMEKNGWDLNVQSR 324
           D+GLS F+EM+ NE   PDQ+T GS+L  C++MGS+GLL GKS+HGF+ KNGW+LNV   
Sbjct: 166 DQGLSFFQEMMANENPKPDQVTVGSVLSGCAHMGSLGLLAGKSVHGFVVKNGWELNVDIG 225

Query: 325 TALVDMYTKCGLLKVAFLIFERMKEKNVVTWSAMICGLAQHGYGEKALLVFEKMKQEGIK 504
           T LVDMY KCG  K A  +F  M+E+NV TW+A+ICG AQHG+ ++ L +F+ M++ G++
Sbjct: 226 TLLVDMYAKCGFFKNAVWVFVLMQERNVSTWTALICGAAQHGFCQEVLSLFKMMQEAGVR 285

Query: 505 PNEITFTGVFSACTHTGLVEEGLKSFEDMVDEYKLEPTVQ 624
           PNE+TFTG+ +AC   GL+EEG K F+ M+ E  LEP +Q
Sbjct: 286 PNEMTFTGILNACARKGLIEEGRKYFK-MIKETGLEPRIQ 324



 Score = 61.2 bits (147), Expect(2) = 2e-58
 Identities = 28/50 (56%), Positives = 39/50 (78%)
 Frame = +3

Query: 3   RNTVTFNTMITGYSQSGDVGNARLVFDSITVKNLASWSAMISAYMYIGQR 152
           RN VT+NTMITGYS+SG +  AR +F+++ V++ ASWSAMI+ Y+  G R
Sbjct: 116 RNIVTWNTMITGYSRSGSINKARSLFEAMPVRDAASWSAMITCYINNGFR 165


>ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 436

 Score =  185 bits (470), Expect(2) = 1e-56
 Identities = 91/157 (57%), Positives = 118/157 (75%)
 Frame = +1

Query: 154 LSLFREMIVNEGFIPDQLTFGSILPTCSNMGSVGLLVGKSIHGFMEKNGWDLNVQSRTAL 333
           L LF++MI+N G  PDQ+  GSIL  C++MGS+GLL GKS+HGF+ KN W+LN++  T L
Sbjct: 172 LLLFQDMIIN-GINPDQMAAGSILNGCAHMGSLGLLAGKSVHGFVVKNRWELNLELGTVL 230

Query: 334 VDMYTKCGLLKVAFLIFERMKEKNVVTWSAMICGLAQHGYGEKALLVFEKMKQEGIKPNE 513
           VDMY KCG LK A  IF  M E+NV TW+A+ICGLA HG  ++AL++FE M+ EG++PNE
Sbjct: 231 VDMYAKCGFLKYACQIFNLMSERNVRTWTALICGLAHHGCCKEALVLFETMRHEGVEPNE 290

Query: 514 ITFTGVFSACTHTGLVEEGLKSFEDMVDEYKLEPTVQ 624
            TFTGV SAC H GLV+EG K F +M++E  LE  +Q
Sbjct: 291 FTFTGVLSACVHAGLVQEGRKYF-NMIEECGLEIRIQ 326



 Score = 60.8 bits (146), Expect(2) = 1e-56
 Identities = 27/45 (60%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   RNTVTFNTMITGYSQSGDVGNARLVFDSITVKNLASWSAMISAYM 137
           +N+VT+NTMI+GYS++GDV  AR +FD +  ++LASWSAMI+AY+
Sbjct: 119 KNSVTWNTMISGYSKAGDVHTARQLFDRMPSRDLASWSAMIAAYI 163



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
 Frame = +1

Query: 82  TALLLRTSRHGLP*FLPTCISDKGLSLFREMIVNEGFIPDQLTFGSILPTCSNMGSVGLL 261
           TAL+   + HG       C  +  L LF E + +EG  P++ TF  +L  C + G V   
Sbjct: 259 TALICGLAHHG-------CCKE-ALVLF-ETMRHEGVEPNEFTFTGVLSACVHAGLVQ-- 307

Query: 262 VGKSIHGFMEKNGWDLNVQSRTALVDMYTKCGLLKVAFLIFERMK-EKNVVTWSAMICGL 438
            G+     +E+ G ++ +Q     VD+  + GLL+ A+ + + M+ E NV+ WS+++   
Sbjct: 308 EGRKYFNMIEECGLEIRIQHYGCFVDLLGRSGLLEEAYGVIKSMRLEPNVIVWSSLLSAC 367

Query: 439 AQHGYGEKALLVFEKMKQEGIKPNEITFTGVFS 537
            QH   + A  V E++  E I+P+     GV+S
Sbjct: 368 KQHKSFDLAERVIEQI-LEKIEPD--NHAGVYS 397


>ref|XP_003626108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240992|gb|ABD32850.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355501123|gb|AES82326.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 417

 Score =  162 bits (411), Expect(2) = 7e-48
 Identities = 78/159 (49%), Positives = 114/159 (71%)
 Frame = +1

Query: 148 KGLSLFREMIVNEGFIPDQLTFGSILPTCSNMGSVGLLVGKSIHGFMEKNGWDLNVQSRT 327
           + L LFR M+  EG  PDQ+    +L  C+++   GLL GKS+HG++ KNGW+LNV+   
Sbjct: 148 QSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVERHGLLGGKSVHGYIVKNGWELNVEIGA 207

Query: 328 ALVDMYTKCGLLKVAFLIFERMKEKNVVTWSAMICGLAQHGYGEKALLVFEKMKQEGIKP 507
           ALV+MY K G+L+ A ++ E M E++V +W+ MICG  + G+ ++AL+VFEKM+ +G+KP
Sbjct: 208 ALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMICGAVRCGFNKEALVVFEKMQMDGVKP 267

Query: 508 NEITFTGVFSACTHTGLVEEGLKSFEDMVDEYKLEPTVQ 624
           NE+TFTGV SAC H G VE+G + F+ M++E  L+P VQ
Sbjct: 268 NELTFTGVLSACAHGGFVEDGRRYFK-MIEECGLKPRVQ 305



 Score = 54.3 bits (129), Expect(2) = 7e-48
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = +3

Query: 3   RNTVTFNTMITGYSQSGDVGNARLVFDSITVKNLASWSAMISAYMYIG 146
           R+TVT+NTMI GYS+  DV  AR +FD +  +++ SW  MISAY+ +G
Sbjct: 97  RDTVTWNTMILGYSRLEDVKKARQLFDEMPHRDIVSWCNMISAYLNVG 144