BLASTX nr result

ID: Aconitum21_contig00026917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026917
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 59   2e-11
ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002331595.1| predicted protein [Populus trichocarpa] gi|2...    45   3e-06
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]    50   3e-06
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    55   5e-06

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 58.9 bits (141), Expect(2) = 2e-11
 Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = +2

Query: 44  YSTWYQSSCHQTV*IFQSQSLMAAVEKA*ASIEDASRIEEYLLRS-ARFTRSHIIQLKTK 220
           + TW +    Q + I+ + +L   +      +ED+  + + L R  +  +R+H+  L++K
Sbjct: 327 FETWCERD--QILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLRSK 384

Query: 221 LQTIKKGTLSVSEFLQKIKEISDNLAAAGSPIDDSDFLVCVL 346
           +QTI KG  S+++FL  IKEIS+ LAAAG P+ +SD +  +L
Sbjct: 385 IQTIHKGDSSMTDFLNSIKEISNKLAAAGEPLSESDLVAYIL 426



 Score = 34.3 bits (77), Expect(2) = 2e-11
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 324 VTFLSVYLKAEFESFCTSIRVRSDVVTMDEIHGL 425
           V ++   L  E+ESF  SI  R++ VT DE+HGL
Sbjct: 422 VAYILSGLPDEYESFVDSIETRNESVTADELHGL 455


>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
 Frame = +2

Query: 44  YSTWYQSSCHQTV*IFQSQS--LMAAVEKA*ASIEDASRIEEYLLRSARFTRSHIIQLKT 217
           Y+TW+Q        I  S S  +++ V +  +S    S +E+   R A  +++ I+QL+ 
Sbjct: 74  YATWHQQDQMILSWINNSLSPTVLSTVARFTSSQATWSSLEK---RYASQSKNRILQLRH 130

Query: 218 KLQTIKKGTLSVSEFLQKIKEISDNLAAAGSPIDDSDFLVCVLKS 352
            L T+K   LS+S+F+ KI +I+DNLA AG P+DD + +  +L +
Sbjct: 131 DLLTVKGEGLSISDFVDKINQIADNLALAGKPVDDDELVNIILNN 175


>ref|XP_002331595.1| predicted protein [Populus trichocarpa] gi|222873971|gb|EEF11102.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 45.1 bits (105), Expect(2) = 3e-06
 Identities = 18/53 (33%), Positives = 35/53 (66%)
 Frame = +2

Query: 188 TRSHIIQLKTKLQTIKKGTLSVSEFLQKIKEISDNLAAAGSPIDDSDFLVCVL 346
           +R+ I+Q++T+L T  KG+ + +++   IK ++D LA AG P++  D +  +L
Sbjct: 33  SRARILQIRTQLATATKGSKTTTDYFHYIKRLTDELAVAGQPLNYDDIITYIL 85



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 324 VTFLSVYLKAEFESFCTSIRVRSDVVTMDEIHGL 425
           +T++   L  +++SF  SI  R+D +T++EI+ L
Sbjct: 81  ITYILAGLSHKYDSFVASISARTDDITLEEIYSL 114


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score = 50.4 bits (119), Expect(2) = 3e-06
 Identities = 19/53 (35%), Positives = 40/53 (75%)
 Frame = +2

Query: 188 TRSHIIQLKTKLQTIKKGTLSVSEFLQKIKEISDNLAAAGSPIDDSDFLVCVL 346
           +++  +QL+  LQ++KKG LS+++++ K++ I+D L+A+G P+ D D ++ +L
Sbjct: 26  SKARTLQLRFMLQSLKKGALSINDYVLKMRNIADMLSASGKPVPDEDLILYIL 78



 Score = 25.0 bits (53), Expect(2) = 3e-06
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 345 LKAEFESFCTSIRVRSDVVTMDEIHGL 425
           L  EFE+   +I  RS+ +++ E+H L
Sbjct: 81  LGPEFETIVVNITSRSEAISLQEVHYL 107


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = +2

Query: 188 TRSHIIQLKTKLQTIKKGTLSVSEFLQKIKEISDNLAAAGSPIDDSDFLVCVL 346
           +RS I  LK +LQT+ +GT S SE+L+  K ++D LAAAG P+DD D +  +L
Sbjct: 118 SRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVDDQDLISFLL 170


Top