BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026861
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314482.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis ly...   127   1e-27
ref|NP_001118682.1| RNA recognition motif-containing protein [Ar...   125   4e-27
ref|NP_188979.2| RNA recognition motif-containing protein [Arabi...   125   4e-27
gb|ABF59161.1| unknown protein [Arabidopsis thaliana]                 103   2e-20

>ref|XP_002314482.1| predicted protein [Populus trichocarpa] gi|222863522|gb|EEF00653.1|
           predicted protein [Populus trichocarpa]
          Length = 702

 Score =  140 bits (354), Expect = 1e-31
 Identities = 79/158 (50%), Positives = 110/158 (69%), Gaps = 2/158 (1%)
 Frame = +3

Query: 81  TSLKVHPPNLIGIHGVPPSLVKNPTRTVMVTGLTCNVASRHLEEAFSFCGARITGFFMGS 260
           T+ ++  PNLIG   +  +LVK+PTRTV +  LT +++S  L+EA SFC + I   F+G+
Sbjct: 479 TASRISIPNLIGDIDISVALVKHPTRTVKIKQLTDDISSHQLKEALSFCRSGIN-VFLGA 537

Query: 261 SSSVAYVEFETEFAKEKAIEACFVHVSGSKLSILRIDTPCTTVVRIIN-NGQ-NPMIGDI 434
           SSS AYVEFE+E AKE+A+   F+ VSG +LSI R+D P TTVVRI+N N Q    +  I
Sbjct: 538 SSSNAYVEFESEDAKERALAKHFLQVSGKQLSIFRVDAPRTTVVRILNINPQCRSNVLTI 597

Query: 435 CRKYGKLRRVFNRSIEVADIHYDISEWPAMVDILNSLN 548
           C+ +GKL R+  R   +AD+++ I EWP M++ILNSLN
Sbjct: 598 CKSFGKLWRMKLRHENIADVYFKIDEWPNMLNILNSLN 635


>ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329267|gb|EFH59686.1| nucleic acid binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 785

 Score =  127 bits (319), Expect = 1e-27
 Identities = 67/151 (44%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
 Frame = +3

Query: 102  PNLIGIHGVPPSLVKNPTRTVMVTGLTCNVASRHLEEAFSFCGARITGFFMGSSSSVAYV 281
            P+LIG   VP +LVK P+RTV +  LT + +S  ++EA  FC + I+ F +GSS + A+V
Sbjct: 570  PDLIGDPDVPVALVKEPSRTVKIHPLTHDFSSNQIKEALKFCRSNISKFILGSSRTDAFV 629

Query: 282  EFETEFAKEKAIEACFVHVSGSKLSILRIDTPCTTVVRIINNGQNPM--IGDICRKYGKL 455
            EFETE  KE+A+    + +  ++L I RID P TTV RI N  ++ M  +  +C  YG++
Sbjct: 630  EFETEDGKERALAEHSISICNTQLFISRIDIPRTTVARISNLSKSAMKDVRALCVPYGQI 689

Query: 456  RRVFNRSIEVADIHYDISEWPAMVDILNSLN 548
            ++V+ R   V D+ +D+SEWP M++ILNSLN
Sbjct: 690  KQVYIRGNGVVDVLFDVSEWPNMLNILNSLN 720


>ref|NP_001118682.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|332643237|gb|AEE76758.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
          Length = 771

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/151 (45%), Positives = 97/151 (64%), Gaps = 2/151 (1%)
 Frame = +3

Query: 102  PNLIGIHGVPPSLVKNPTRTVMVTGLTCNVASRHLEEAFSFCGARITGFFMGSSSSVAYV 281
            P+LIG   VP +LVK P RTV +  LT + +S  ++EA  FC + I+ F +GSS + A+V
Sbjct: 556  PDLIGDPDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFV 615

Query: 282  EFETEFAKEKAIEACFVHVSGSKLSILRIDTPCTTVVRIINNGQNPM--IGDICRKYGKL 455
            EFETE  KE+A+    + +  ++L I RID P T V RI N  ++ M  +  +C  YG++
Sbjct: 616  EFETEDGKERALAEHSISICNTQLFISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQI 675

Query: 456  RRVFNRSIEVADIHYDISEWPAMVDILNSLN 548
            R V+ R   VAD+ +DISEWP M+ ILNS+N
Sbjct: 676  RGVYIRGTGVADVFFDISEWPNMLAILNSMN 706


>ref|NP_188979.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|11994322|dbj|BAB02281.1| unnamed protein product
            [Arabidopsis thaliana] gi|332643236|gb|AEE76757.1| RNA
            recognition motif-containing protein [Arabidopsis
            thaliana]
          Length = 811

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/151 (45%), Positives = 97/151 (64%), Gaps = 2/151 (1%)
 Frame = +3

Query: 102  PNLIGIHGVPPSLVKNPTRTVMVTGLTCNVASRHLEEAFSFCGARITGFFMGSSSSVAYV 281
            P+LIG   VP +LVK P RTV +  LT + +S  ++EA  FC + I+ F +GSS + A+V
Sbjct: 596  PDLIGDPDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFV 655

Query: 282  EFETEFAKEKAIEACFVHVSGSKLSILRIDTPCTTVVRIINNGQNPM--IGDICRKYGKL 455
            EFETE  KE+A+    + +  ++L I RID P T V RI N  ++ M  +  +C  YG++
Sbjct: 656  EFETEDGKERALAEHSISICNTQLFISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQI 715

Query: 456  RRVFNRSIEVADIHYDISEWPAMVDILNSLN 548
            R V+ R   VAD+ +DISEWP M+ ILNS+N
Sbjct: 716  RGVYIRGTGVADVFFDISEWPNMLAILNSMN 746


>gb|ABF59161.1| unknown protein [Arabidopsis thaliana]
          Length = 226

 Score =  103 bits (257), Expect = 2e-20
 Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 2/127 (1%)
 Frame = +3

Query: 174 GLTCNVASRHLEEAFSFCGARITGFFMGSSSSVAYVEFETEFAKEKAIEACFVHVSGSKL 353
           G  C   S  ++EA  FC + I+ F +GSS + A+VEFETE  KE+A+    + +  ++L
Sbjct: 35  GRKCERLSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQL 94

Query: 354 SILRIDTPCTTVVRIINNGQNPM--IGDICRKYGKLRRVFNRSIEVADIHYDISEWPAMV 527
            I RID P T V RI N  ++ M  +  +C  YG++R V+ R   VAD+ +DISEWP M+
Sbjct: 95  FISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNML 154

Query: 528 DILNSLN 548
            ILNS+N
Sbjct: 155 AILNSMN 161