BLASTX nr result

ID: Aconitum21_contig00026766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026766
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]                  70   5e-10
ref|XP_003631240.1| PREDICTED: 60S ribosomal protein L27-3 isofo...    68   3e-09
ref|XP_002277425.1| PREDICTED: 60S ribosomal protein L27-3 isofo...    68   3e-09
gb|ACF06535.1| 60S ribosomal protein L27 [Elaeis guineensis] gi|...    67   4e-09
ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis ...    67   4e-09

>dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]
          Length = 135

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 49/85 (57%), Positives = 56/85 (65%), Gaps = 23/85 (27%)
 Frame = +3

Query: 264 KTVIV--FDEGTR--VFTYCLVAGISKYPKKVIRKDSAKKTA---RVKTFI--------- 395
           K+VI+  FDEGTR   + +CLVAGISKYPKKVIRKDSAKKTA   RVK FI         
Sbjct: 22  KSVIIKSFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAKKTAKKSRVKAFIKLVNCNHIM 81

Query: 396 ----TLNVDLKDVET---FQSNNKE 449
               TL+VDLKDV T    QS +K+
Sbjct: 82  PTRYTLDVDLKDVVTVDCLQSRDKK 106


>ref|XP_003631240.1| PREDICTED: 60S ribosomal protein L27-3 isoform 2 [Vitis vinifera]
          Length = 156

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 48/85 (56%), Positives = 55/85 (64%), Gaps = 23/85 (27%)
 Frame = +3

Query: 264 KTVIV--FDEGTR--VFTYCLVAGISKYPKKVIRKDSAKKTA---RVKTFI--------- 395
           K VIV  FD+GTR   + +CLVAGI+KYPKKVIRKDSAKKTA   RVK FI         
Sbjct: 22  KAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHLM 81

Query: 396 ----TLNVDLKDVET---FQSNNKE 449
               TL+VDLKDV T    QS +K+
Sbjct: 82  PTRYTLDVDLKDVVTVDALQSRDKK 106


>ref|XP_002277425.1| PREDICTED: 60S ribosomal protein L27-3 isoform 1 [Vitis vinifera]
          Length = 135

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 48/85 (56%), Positives = 55/85 (64%), Gaps = 23/85 (27%)
 Frame = +3

Query: 264 KTVIV--FDEGTR--VFTYCLVAGISKYPKKVIRKDSAKKTA---RVKTFI--------- 395
           K VIV  FD+GTR   + +CLVAGI+KYPKKVIRKDSAKKTA   RVK FI         
Sbjct: 22  KAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHLM 81

Query: 396 ----TLNVDLKDVET---FQSNNKE 449
               TL+VDLKDV T    QS +K+
Sbjct: 82  PTRYTLDVDLKDVVTVDALQSRDKK 106


>gb|ACF06535.1| 60S ribosomal protein L27 [Elaeis guineensis]
           gi|448872692|gb|AGE46031.1| 60S ribosomal protein l27
           [Elaeis guineensis]
          Length = 135

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 21/89 (23%)
 Frame = +3

Query: 264 KTVIV--FDEGTR--VFTYCLVAGISKYPKKVIRKDSAKKTA---RVKTFI--------- 395
           K VIV  FDEGTR   + +CLVAGI KYPKKVIRKDSAKKTA   RVK F+         
Sbjct: 22  KAVIVRCFDEGTRDRPYGHCLVAGILKYPKKVIRKDSAKKTAKKSRVKAFLKMVNYSHIM 81

Query: 396 ----TLNVDLKDVETFQ-SNNKEERIQHC 467
               TL+VDLKDV T     ++++++  C
Sbjct: 82  PTRYTLDVDLKDVVTLDVLQSRDKKVAAC 110


>ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis vinifera]
          Length = 135

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 47/85 (55%), Positives = 55/85 (64%), Gaps = 23/85 (27%)
 Frame = +3

Query: 264 KTVIV--FDEGTR--VFTYCLVAGISKYPKKVIRKDSAKKTA---RVKTFI--------- 395
           K VIV  FD+GTR   + +CLVAGI+KYPKKVIRKDSAKKTA   RVK FI         
Sbjct: 22  KAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIM 81

Query: 396 ----TLNVDLKDV---ETFQSNNKE 449
               TL+VDLKDV   +  QS +K+
Sbjct: 82  PTRYTLDVDLKDVVSPDVLQSRDKK 106


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