BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026725
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   150   3e-34
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]   150   3e-34
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   139   3e-31
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   137   2e-30
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]      133   2e-29

>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score =  150 bits (378), Expect = 3e-34
 Identities = 84/187 (44%), Positives = 111/187 (59%), Gaps = 12/187 (6%)
 Frame = +2

Query: 119 AQFYHQWKHGIHISVKSQRCNRL-ISCHSTSLQTHTLSESVSLDK---RVFTEDPPWMAS 286
           + F H +    H S    +C+ L +S  + S++T   S ++ + +   R+F +DPPW++S
Sbjct: 55  SSFRHNFHSPSHSSNSEAQCHALPLSPTNNSIETLQDSSNIQVKESIPRIFVQDPPWISS 114

Query: 287 FLSSNHT--------NHKLALHDMERKKHTLLRRRQVKAETEAWERTAQEYREFEREMCQ 442
           FL  +          N KL   + ER+ + LLRRRQVKAETEAWER  +EYRE EREMC+
Sbjct: 115 FLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWERMVEEYREIEREMCE 174

Query: 443 NKLAPCLPYVKSLFLGWFEPLKQAIXXXXXXXXXXXXXXXXXXXXXXXXXDKMAVIVMHK 622
            KLAP LPYVK+LFLGWFEPL++AI                         DKMAVIVMHK
Sbjct: 175 KKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHK 234

Query: 623 MMGLLMI 643
           MMGL+M+
Sbjct: 235 MMGLVMM 241


>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
          Length = 1312

 Score =  150 bits (378), Expect = 3e-34
 Identities = 84/187 (44%), Positives = 111/187 (59%), Gaps = 12/187 (6%)
 Frame = +2

Query: 119 AQFYHQWKHGIHISVKSQRCNRL-ISCHSTSLQTHTLSESVSLDK---RVFTEDPPWMAS 286
           + F H +    H S    +C+ L +S  + S++T   S ++ + +   R+F +DPPW++S
Sbjct: 55  SSFRHNFHSPSHSSNSEAQCHALPLSPTNNSIETLQDSSNIQVKESIPRIFVQDPPWISS 114

Query: 287 FLSSNHT--------NHKLALHDMERKKHTLLRRRQVKAETEAWERTAQEYREFEREMCQ 442
           FL  +          N KL   + ER+ + LLRRRQVKAETEAWER  +EYRE EREMC+
Sbjct: 115 FLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWERMVEEYREIEREMCE 174

Query: 443 NKLAPCLPYVKSLFLGWFEPLKQAIXXXXXXXXXXXXXXXXXXXXXXXXXDKMAVIVMHK 622
            KLAP LPYVK+LFLGWFEPL++AI                         DKMAVIVMHK
Sbjct: 175 KKLAPNLPYVKALFLGWFEPLREAIEKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHK 234

Query: 623 MMGLLMI 643
           MMGL+M+
Sbjct: 235 MMGLVMM 241


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score =  139 bits (351), Expect = 3e-31
 Identities = 73/149 (48%), Positives = 91/149 (61%), Gaps = 5/149 (3%)
 Frame = +2

Query: 212 QTHTLSESVSLDKRVFTEDPPWMASFLSSN-----HTNHKLALHDMERKKHTLLRRRQVK 376
           + H ++   S  KR+F +DPPW+AS              KL   ++E++K+ LLRRRQ+K
Sbjct: 91  EIHQITRGES-SKRIFIQDPPWIASLFLKGLYKCVQKEVKLEFMEIEKRKYNLLRRRQIK 149

Query: 377 AETEAWERTAQEYREFEREMCQNKLAPCLPYVKSLFLGWFEPLKQAIXXXXXXXXXXXXX 556
           AETEAWE+  +EY+E EREMC+ KLAP LPYVK LFLGWFEPLK AI             
Sbjct: 150 AETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQK 209

Query: 557 XXXXXXXXXXXXDKMAVIVMHKMMGLLMI 643
                       DKMAVIVM+KMMGLLM+
Sbjct: 210 AAFAPHIELLSADKMAVIVMYKMMGLLMM 238


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score =  137 bits (344), Expect = 2e-30
 Identities = 72/149 (48%), Positives = 90/149 (60%), Gaps = 5/149 (3%)
 Frame = +2

Query: 212 QTHTLSESVSLDKRVFTEDPPWMASFLSSN-----HTNHKLALHDMERKKHTLLRRRQVK 376
           + H ++   S  KR+F +DPPW+AS              KL   ++E++K+ LLRRRQ+K
Sbjct: 91  EIHQITRGES-SKRIFIQDPPWIASLFLKGLYKCVQKEVKLEFMEIEKRKYNLLRRRQIK 149

Query: 377 AETEAWERTAQEYREFEREMCQNKLAPCLPYVKSLFLGWFEPLKQAIXXXXXXXXXXXXX 556
           AETEAWE+  +EY+E EREMC+ KLAP LPYVK LFLGWFEPLK AI             
Sbjct: 150 AETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQK 209

Query: 557 XXXXXXXXXXXXDKMAVIVMHKMMGLLMI 643
                       DKMA IVM+KMMGLLM+
Sbjct: 210 AAFAPHIELLSADKMAGIVMYKMMGLLMM 238


>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 989

 Score =  133 bits (335), Expect = 2e-29
 Identities = 70/143 (48%), Positives = 88/143 (61%), Gaps = 4/143 (2%)
 Frame = +2

Query: 227 SESVSLDKRVFTEDPPWMASF----LSSNHTNHKLALHDMERKKHTLLRRRQVKAETEAW 394
           S+ +    R+F +DPPW+ +     L  ++T  +L   ++ER+K+ LLRRRQ+KAETEAW
Sbjct: 110 SDKIKGSSRIFMQDPPWVNTLFMKGLVDSNTGLRLEFKEIEREKYNLLRRRQIKAETEAW 169

Query: 395 ERTAQEYREFEREMCQNKLAPCLPYVKSLFLGWFEPLKQAIXXXXXXXXXXXXXXXXXXX 574
           E   +EYREF REM   KLAP LP VK+LFLGWFEPLK+AI                   
Sbjct: 170 ESMVEEYREFVREMRDKKLAPNLPQVKALFLGWFEPLKKAIEKEQKSQRSRKQKAIYGYH 229

Query: 575 XXXXXXDKMAVIVMHKMMGLLMI 643
                 DKMAVIVMHKMM LLM+
Sbjct: 230 IDMLPADKMAVIVMHKMMSLLMV 252