BLASTX nr result

ID: Aconitum21_contig00026526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026526
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   223   2e-56
gb|ADG85113.1| mismatch repair protein [Solanum lycopersicum]         219   3e-55
emb|CBI28088.3| unnamed protein product [Vitis vinifera]              218   5e-55
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative...   217   1e-54
ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...   216   3e-54

>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  223 bits (569), Expect = 2e-56
 Identities = 111/165 (67%), Positives = 135/165 (81%), Gaps = 1/165 (0%)
 Frame = -1

Query: 618  DGLLQ-DLAVSALGGLVNHLSRLMLSDVLCNGDVLPYLVHRGCLRLDGQSLVNLEIFGNN 442
            DG++  DLA+ ALGGL+ HLSRL L D L NGD+LPY V+ GCLR+DGQ+LVNLEIF NN
Sbjct: 518  DGVMHHDLALCALGGLLGHLSRLKLDDTLRNGDILPYQVYSGCLRMDGQTLVNLEIFSNN 577

Query: 441  VDGDTSGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVEGLINNPEISFQVA 262
             DG +SGTLYKYLDNC+T+SGKRLLR+WICHPLKDV  IN+RLNVVE L+ N E    +A
Sbjct: 578  ADGGSSGTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINNRLNVVEHLMTNTETMSFIA 637

Query: 261  QHLRVIPDIERLLGRVKASVGSSTSLLLPLVGERVLKRRVKAYGI 127
            Q LR +PD+ERLLG+VKASV SS  LLLP  G+++LK+RVK +G+
Sbjct: 638  QCLRKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRVKVFGL 682


>gb|ADG85113.1| mismatch repair protein [Solanum lycopersicum]
          Length = 782

 Score =  219 bits (558), Expect = 3e-55
 Identities = 105/164 (64%), Positives = 136/164 (82%)
 Frame = -1

Query: 618 DGLLQDLAVSALGGLVNHLSRLMLSDVLCNGDVLPYLVHRGCLRLDGQSLVNLEIFGNNV 439
           DG   D+A+ ALG LVNHL RLML++VL NGD+L Y V++GCL++DGQ+LVNLEIF NNV
Sbjct: 197 DGEDHDVALCALGSLVNHLERLMLNEVLHNGDILSYEVYKGCLKMDGQTLVNLEIFNNNV 256

Query: 438 DGDTSGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVEGLINNPEISFQVAQ 259
           DG  SGTLY+YLDNC+T  GKRLLR WICHPLKDV +IN RL+VV+ L++N  +S   AQ
Sbjct: 257 DGSPSGTLYRYLDNCVTLPGKRLLRKWICHPLKDVEKINHRLDVVDKLVDNATLS--TAQ 314

Query: 258 HLRVIPDIERLLGRVKASVGSSTSLLLPLVGERVLKRRVKAYGI 127
           +LR +PD++RLLGRVKAS+ SS +LLLPL+G ++LK+R+K +G+
Sbjct: 315 YLRKLPDLDRLLGRVKASIQSSEALLLPLIGAKILKQRIKVFGL 358


>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  218 bits (556), Expect = 5e-55
 Identities = 111/167 (66%), Positives = 135/167 (80%), Gaps = 3/167 (1%)
 Frame = -1

Query: 618  DGLLQ-DLAVSALGGLVNHLSRLMLSDVLCNGDVLPYLVHRGCLRLDGQSLVNLEIFGNN 442
            DG++  DLA+ ALGGL+ HLSRL L D L NGD+LPY V+ GCLR+DGQ+LVNLEIF NN
Sbjct: 520  DGVMHHDLALCALGGLLGHLSRLKLDDTLRNGDILPYQVYSGCLRMDGQTLVNLEIFSNN 579

Query: 441  VDGDTSG--TLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVEGLINNPEISFQ 268
             DG +SG  TLYKYLDNC+T+SGKRLLR+WICHPLKDV  IN+RLNVVE L+ N E    
Sbjct: 580  ADGGSSGKCTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINNRLNVVEHLMTNTETMSF 639

Query: 267  VAQHLRVIPDIERLLGRVKASVGSSTSLLLPLVGERVLKRRVKAYGI 127
            +AQ LR +PD+ERLLG+VKASV SS  LLLP  G+++LK+RVK +G+
Sbjct: 640  IAQCLRKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRVKVFGL 686


>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
           gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
           MSH6-2, putative [Ricinus communis]
          Length = 1089

 Score =  217 bits (553), Expect = 1e-54
 Identities = 103/158 (65%), Positives = 131/158 (82%)
 Frame = -1

Query: 603 DLAVSALGGLVNHLSRLMLSDVLCNGDVLPYLVHRGCLRLDGQSLVNLEIFGNNVDGDTS 424
           D+ ++ALG LV+HLSRLML DVL NGD+LPY V+ GCLR+DGQ+L+NLEIF NN DG  S
Sbjct: 502 DITLNALGTLVDHLSRLMLDDVLRNGDILPYQVYSGCLRMDGQTLINLEIFNNNSDGGLS 561

Query: 423 GTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVEGLINNPEISFQVAQHLRVI 244
           GTL+ YLDNC+T+SGKRLLR W+CHPLK V  IN+RLNVVE L+   +I   ++Q+LR I
Sbjct: 562 GTLFNYLDNCVTSSGKRLLRKWMCHPLKSVEGINNRLNVVEDLMTQSDIMLVISQYLRKI 621

Query: 243 PDIERLLGRVKASVGSSTSLLLPLVGERVLKRRVKAYG 130
           PDIER+LGRVKAS  +S SL+LPL+G++VL++RVK +G
Sbjct: 622 PDIERMLGRVKASFQASASLVLPLIGKKVLRQRVKVFG 659


>ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
           MSH7-like [Cucumis sativus]
          Length = 1095

 Score =  216 bits (550), Expect = 3e-54
 Identities = 106/159 (66%), Positives = 133/159 (83%), Gaps = 1/159 (0%)
 Frame = -1

Query: 603 DLAVSALGGLVNHLSRLMLSDVLCNGDVLPYLVHRGCLRLDGQSLVNLEIFGNNVDGDTS 424
           D+A+ ALGGL+NH+SRLML DVL NGD+LPY V+RGCLR+DGQ++VNLEIF NN DG  S
Sbjct: 515 DIALCALGGLINHMSRLMLDDVLRNGDLLPYQVYRGCLRMDGQTMVNLEIFRNNDDGGLS 574

Query: 423 GTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVEGLINNPEISFQV-AQHLRV 247
           GTLYKYLDNC+T+SGKRLLR WICHPLKDV EIN+RLNVVE L+   +I   +   +LR 
Sbjct: 575 GTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINNRLNVVEELMAQSDIMVLLGTTYLRK 634

Query: 246 IPDIERLLGRVKASVGSSTSLLLPLVGERVLKRRVKAYG 130
           +PD+ERLLG++KA+V SS SL+LPL+ +++ KRRVK +G
Sbjct: 635 LPDLERLLGQIKATVQSSASLVLPLIRKKLQKRRVKLFG 673


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