BLASTX nr result

ID: Aconitum21_contig00026518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026518
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   172   3e-41
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   163   1e-38
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   158   4e-37
ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub...   157   8e-37

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
           vinifera]
          Length = 1142

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/135 (60%), Positives = 105/135 (77%)
 Frame = +2

Query: 2   HIGENFQPVMDGMENERQSLVGEAVLEEYILVHLKSYHDKFNMLIFMLQKLFAFVDHMAA 181
           HIGE+FQ VMDG+ENE  S+V +AVL EYI VHL + +DKFN+LIFM+QKLF+ +D  + 
Sbjct: 264 HIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSV 323

Query: 182 EDNTDALQNHEVLQPGHLITIYLKEKLQEWLFKAGRLLQDELKKNGKIDIADTASLKKVM 361
            DN D LQN EVL PGHLITIYLKEKLQEWL+KA RLLQDE+ K    + +  A +KKVM
Sbjct: 324 PDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVM 383

Query: 362 NRNSSKGVGVAIDSM 406
           ++N S+ + +A+++M
Sbjct: 384 DKNPSRQISLAVENM 398


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/135 (60%), Positives = 105/135 (77%)
 Frame = +2

Query: 2   HIGENFQPVMDGMENERQSLVGEAVLEEYILVHLKSYHDKFNMLIFMLQKLFAFVDHMAA 181
           HIGE+FQ VMDG+ENE  S+V +AVL EYI VHL + +DKFN+LIFM+QKLF+ +D  + 
Sbjct: 257 HIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSV 316

Query: 182 EDNTDALQNHEVLQPGHLITIYLKEKLQEWLFKAGRLLQDELKKNGKIDIADTASLKKVM 361
            DN D LQN EVL PGHLITIYLKEKLQEWL+KA RLLQDE+ K    + +  A +KKVM
Sbjct: 317 PDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVM 376

Query: 362 NRNSSKGVGVAIDSM 406
           ++N S+ + +A+++M
Sbjct: 377 DKNPSRQISLAVENM 391


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
           gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase
           I subunit, putative [Ricinus communis]
          Length = 1159

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/135 (57%), Positives = 102/135 (75%)
 Frame = +2

Query: 2   HIGENFQPVMDGMENERQSLVGEAVLEEYILVHLKSYHDKFNMLIFMLQKLFAFVDHMAA 181
           HIGE+FQPVMDG+E E  S V  AVL++YI VHL +Y DKFN+LIFMLQKLF+ VD  + 
Sbjct: 280 HIGEHFQPVMDGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSV 339

Query: 182 EDNTDALQNHEVLQPGHLITIYLKEKLQEWLFKAGRLLQDELKKNGKIDIADTASLKKVM 361
            DN D+LQN EVL PGHL+TIYLKEKL+EWL KA ++LQ+E+ KN   +      +KKV+
Sbjct: 340 VDNPDSLQNQEVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIAKNNNFNFLSVLDVKKVI 399

Query: 362 NRNSSKGVGVAIDSM 406
           ++N S  + +A+++M
Sbjct: 400 DKNPSTTISLAVENM 414


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
           max]
          Length = 1175

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/136 (56%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
 Frame = +2

Query: 2   HIGENFQPVMDGMENERQSLVGEAVLEEYILVHLKSYHDKFNMLIFMLQKLFAFVDHMAA 181
           +IGE+FQPVM+ ++N+   +V +AVL++ ILVHL +  DKFN+LIFMLQKLF+ +D  + 
Sbjct: 294 YIGEHFQPVMNELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSV 353

Query: 182 EDNTDALQNHEVLQPGHLITIYLKEKLQEWLFKAGRLLQDEL-KKNGKIDIADTASLKKV 358
            DN D+LQNHEVL PGHLIT+YLKEKL++WL K  RLL DE+ KK+ K D +D   +KKV
Sbjct: 354 PDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKV 413

Query: 359 MNRNSSKGVGVAIDSM 406
           M++NS K V  A+++M
Sbjct: 414 MDKNSPKQVSTAVENM 429


>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
           max]
          Length = 1175

 Score =  157 bits (397), Expect = 8e-37
 Identities = 77/136 (56%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
 Frame = +2

Query: 2   HIGENFQPVMDGMENERQSLVGEAVLEEYILVHLKSYHDKFNMLIFMLQKLFAFVDHMAA 181
           +IGE+FQPV+  ++N+   +V EAVL++ ILVHL +  DKFN+LIFMLQKLF+ +D  + 
Sbjct: 294 YIGEHFQPVITELKNDSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSV 353

Query: 182 EDNTDALQNHEVLQPGHLITIYLKEKLQEWLFKAGRLLQDEL-KKNGKIDIADTASLKKV 358
            DN D+LQNHEVL PGHLIT+YLKEKL++WL K  RLL DE+ KK+ K D +D   +KKV
Sbjct: 354 PDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKV 413

Query: 359 MNRNSSKGVGVAIDSM 406
           M++NS K V  A+++M
Sbjct: 414 MDKNSPKQVSTAVENM 429


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