BLASTX nr result

ID: Aconitum21_contig00026307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026307
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...   210   2e-52
emb|CBI24843.3| unnamed protein product [Vitis vinifera]              181   6e-44
ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com...   181   6e-44
gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidops...   155   4e-36
ref|NP_191514.1| Sister chromatid cohesion 1 protein 3 [Arabidop...   155   4e-36

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score =  210 bits (534), Expect = 2e-52
 Identities = 108/173 (62%), Positives = 123/173 (71%)
 Frame = -2

Query: 582 PLGTVWMAAXXXXXXXXXLINVTNIPTTVDYIMVPEVPIALRLSAHLLLGVVRIYSKKVD 403
           PLGTVW AA             T+IP+TV+ IM PEVPIALR+S HLLLGVVRIYSKKVD
Sbjct: 13  PLGTVWCAAHLQHKLKKSHYTATDIPSTVERIMFPEVPIALRMSGHLLLGVVRIYSKKVD 72

Query: 402 YLFHDCNLIFTRIRTLFASIHEINLPEDATCAPFHSITLPETFELDALDLDDASYQERVL 223
           YL+ DCN++   IR  F+SI E+NLPEDA+ APFHSITLP+TFELDALDLD   Y E  L
Sbjct: 73  YLYQDCNIVLIGIRKAFSSI-EVNLPEDASHAPFHSITLPDTFELDALDLDADFYVEGAL 131

Query: 222 DNHTSTSEEITLTDQIPGEADPYVTFFINEDIQTGFLPAEETPDTGVRPMDED 64
           D H    EEITLTDQIP   DPY+    +ED+ T     EE PD+GVRPMDED
Sbjct: 132 DMHLRAQEEITLTDQIPIGRDPYIAITFDEDVMTDLSNHEEIPDSGVRPMDED 184


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  181 bits (460), Expect = 6e-44
 Identities = 94/150 (62%), Positives = 107/150 (71%)
 Frame = -2

Query: 582 PLGTVWMAAXXXXXXXXXLINVTNIPTTVDYIMVPEVPIALRLSAHLLLGVVRIYSKKVD 403
           PLGTVW AA             T+IP+TV+ IM PEVPIALR+S HLLLGVVRIYSKKVD
Sbjct: 13  PLGTVWCAAHLQHKLKKSHYTATDIPSTVERIMFPEVPIALRMSGHLLLGVVRIYSKKVD 72

Query: 402 YLFHDCNLIFTRIRTLFASIHEINLPEDATCAPFHSITLPETFELDALDLDDASYQERVL 223
           YL+ DCN++   IR  F+SI E+NLPEDA+ APFHSITLP+TFELDALDLD   Y E  L
Sbjct: 73  YLYQDCNIVLIGIRKAFSSI-EVNLPEDASHAPFHSITLPDTFELDALDLDADFYVEGAL 131

Query: 222 DNHTSTSEEITLTDQIPGEADPYVTFFINE 133
           D H    EEITLTDQIP   DPY+    +E
Sbjct: 132 DMHLRAQEEITLTDQIPIGRDPYIAITFDE 161


>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 774

 Score =  181 bits (460), Expect = 6e-44
 Identities = 94/172 (54%), Positives = 115/172 (66%)
 Frame = -2

Query: 582 PLGTVWMAAXXXXXXXXXLINVTNIPTTVDYIMVPEVPIALRLSAHLLLGVVRIYSKKVD 403
           PLGTVW AA             T+I +TVD IM PEVPIALR+S HLLLGVVRIYSKKVD
Sbjct: 13  PLGTVWCAAHLQHRLKKSHYTSTDISSTVDRIMFPEVPIALRMSGHLLLGVVRIYSKKVD 72

Query: 402 YLFHDCNLIFTRIRTLFASIHEINLPEDATCAPFHSITLPETFELDALDLDDASYQERVL 223
           +L+HDCN++   +R  F SI E+NLPE+AT A F S+TLP TF+LDALD+D         
Sbjct: 73  FLYHDCNVVLVGLRKAFTSI-EVNLPENATTAKFESVTLPPTFDLDALDVDFDIDAYGSP 131

Query: 222 DNHTSTSEEITLTDQIPGEADPYVTFFINEDIQTGFLPAEETPDTGVRPMDE 67
           DNH  + EEITL DQIP + DPYV    +ED+    LP EE  + G+RP ++
Sbjct: 132 DNHMRSQEEITLQDQIPTDRDPYVVISFDEDVMMDTLPPEEELNAGIRPTED 183


>gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidopsis thaliana]
          Length = 692

 Score =  155 bits (393), Expect = 4e-36
 Identities = 85/165 (51%), Positives = 105/165 (63%)
 Frame = -2

Query: 582 PLGTVWMAAXXXXXXXXXLINVTNIPTTVDYIMVPEVPIALRLSAHLLLGVVRIYSKKVD 403
           PLGTVW AA              NIP TVD IM PEVP+ALR S+HLL+GVVRIYSKKVD
Sbjct: 13  PLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLLVGVVRIYSKKVD 72

Query: 402 YLFHDCNLIFTRIRTLFASIHEINLPEDATCAPFHSITLPETFELDALDLDDASYQERVL 223
           YL++D NL+ T +   F S  ++NLPEDA  AP  S+TLP+   LD  DL+D +  +   
Sbjct: 73  YLYNDWNLLNTWVAKAFVST-QVNLPEDARQAPPESVTLPQALNLDEFDLEDDTL-DMEF 130

Query: 222 DNHTSTSEEITLTDQIPGEADPYVTFFINEDIQTGFLPAEETPDT 88
           DNHT + E+ITLTDQIP   DPYV    +EDI +  +P +    T
Sbjct: 131 DNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQST 175


>ref|NP_191514.1| Sister chromatid cohesion 1 protein 3 [Arabidopsis thaliana]
           gi|30913284|sp|Q9FQ19.2|SCC13_ARATH RecName: Full=Sister
           chromatid cohesion 1 protein 3; AltName: Full=SCC1
           homolog 3; Short=AtRAD21-2
           gi|18157647|gb|AAL62059.1|AF400128_1 RAD21-2
           [Arabidopsis thaliana] gi|6996291|emb|CAB75452.1|
           putative protein [Arabidopsis thaliana]
           gi|332646418|gb|AEE79939.1| Sister chromatid cohesion 1
           protein 3 [Arabidopsis thaliana]
          Length = 693

 Score =  155 bits (393), Expect = 4e-36
 Identities = 85/165 (51%), Positives = 105/165 (63%)
 Frame = -2

Query: 582 PLGTVWMAAXXXXXXXXXLINVTNIPTTVDYIMVPEVPIALRLSAHLLLGVVRIYSKKVD 403
           PLGTVW AA              NIP TVD IM PEVP+ALR S+HLL+GVVRIYSKKVD
Sbjct: 13  PLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLLVGVVRIYSKKVD 72

Query: 402 YLFHDCNLIFTRIRTLFASIHEINLPEDATCAPFHSITLPETFELDALDLDDASYQERVL 223
           YL++D NL+ T +   F S  ++NLPEDA  AP  S+TLP+   LD  DL+D +  +   
Sbjct: 73  YLYNDWNLLNTWVAKAFVST-QVNLPEDARQAPPESVTLPQALNLDEFDLEDDTL-DMEF 130

Query: 222 DNHTSTSEEITLTDQIPGEADPYVTFFINEDIQTGFLPAEETPDT 88
           DNHT + E+ITLTDQIP   DPYV    +EDI +  +P +    T
Sbjct: 131 DNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQST 175


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