BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026052
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_002510620.1| pentatricopeptide repeat-containing protein,...   109   3e-22
ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat...   108   4e-22
ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arab...   107   8e-22

>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/145 (42%), Positives = 95/145 (65%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
           VVL+T M+SG  +NG+  +AL +  +M++ GV+ +  TM+SV++AC++L   +LG SVHG
Sbjct: 334 VVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHG 393

Query: 255 FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
           +  RHE+   D+  +++ V M+ KC  LD    +FD+M  RNLVSW+ +IT YA +G   
Sbjct: 394 YMFRHELPM-DIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVC 452

Query: 75  KVIRVFKEMVSVDRERPRLSTLVSV 1
           K + +F EM S D + P   T+VS+
Sbjct: 453 KALFLFNEMRS-DHQTPDSITIVSL 476



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/130 (33%), Positives = 75/130 (57%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
           +V +  M++G+ +NG V +AL L   M  +   P+ +T+ S++  C+    + LGK +H 
Sbjct: 435 LVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHS 494

Query: 255 FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
           F IR+ + +  ++++++ VDMY KC  LD   R F++M   +LVSW  II  Y  HG  E
Sbjct: 495 FVIRNGL-RPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGE 553

Query: 75  KVIRVFKEMV 46
             +R + + +
Sbjct: 554 TALRFYSKFL 563



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/129 (34%), Positives = 77/129 (59%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
           VV +T+++  + R G V EA  L   M R+G++P+ VTM S++   S+L  +   + +HG
Sbjct: 135 VVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV---QCLHG 191

Query: 255 FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
             I +     D+ L ++ + MY KCR ++Y  ++FD M  R+LVSW+ +++AYA  G   
Sbjct: 192 SAILYGF-MSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYIC 250

Query: 75  KVIRVFKEM 49
           +V+ + K M
Sbjct: 251 EVLLLLKTM 259



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/130 (28%), Positives = 72/130 (55%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
           +V + ++VS + + G + E L L+  M  +G  P+  T  SV+S  +    + LG+ +HG
Sbjct: 233 LVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHG 292

Query: 255 FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
             +R      D  +E++ + MY+K   +D   R+F+R   +++V W  +I+    +GS +
Sbjct: 293 QILRTCFDL-DAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSAD 351

Query: 75  KVIRVFKEMV 46
           K + VF++M+
Sbjct: 352 KALAVFRQML 361



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/126 (27%), Positives = 60/126 (47%)
 Frame = -1

Query: 426 YTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHGFCI 247
           +  +++     GA ++ L     M++  V  +  T  S++ ACS L + SLG S+H   +
Sbjct: 37  FNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRIL 96

Query: 246 RHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNEKVI 67
              +   D  + S+ ++ Y K    D   ++FD M  RN+V W  II  Y+  G   +  
Sbjct: 97  VSGLSL-DAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155

Query: 66  RVFKEM 49
            +F EM
Sbjct: 156 SLFDEM 161


>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/145 (40%), Positives = 94/145 (64%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
           VVL+T M+SG  +NG+  +AL +  +M++ GV+P+  TM+SV++AC++L   +LG S+ G
Sbjct: 326 VVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILG 385

Query: 255 FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
           + +R E+   DV  +++ V MY KC  LD    +FD M  R+LVSW+ ++T YA +G   
Sbjct: 386 YILRQELPL-DVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVC 444

Query: 75  KVIRVFKEMVSVDRERPRLSTLVSV 1
           + + +F EM S D + P   T+VS+
Sbjct: 445 EALFLFNEMRS-DNQTPDSITIVSL 468



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/130 (34%), Positives = 75/130 (57%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
           +V +  MV+G+ +NG V EAL L   M  +   P+ +T+ S++  C+    + LGK +H 
Sbjct: 427 LVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHS 486

Query: 255 FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
           F IR+ + +  ++++++ VDMY KC  LD   R F++M   +LVSW  II  Y  HG  E
Sbjct: 487 FVIRNGL-RPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGE 545

Query: 75  KVIRVFKEMV 46
             +R + + +
Sbjct: 546 AALRFYSKFL 555



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/129 (34%), Positives = 78/129 (60%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
           VV +TT++  + R G V EA  L   M R+G++P+ VT+ S++   S+L  +   + +HG
Sbjct: 127 VVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHV---QCLHG 183

Query: 255 FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
             I +     D+ L ++ +++Y KC  ++Y  ++FD M  R+LVSW+ +I+AYA  G+  
Sbjct: 184 CAILYGF-MSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNIC 242

Query: 75  KVIRVFKEM 49
           +V+ + K M
Sbjct: 243 EVLLLLKTM 251



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 39/145 (26%), Positives = 78/145 (53%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
           +V + +++S + + G + E L L+  M  +G      T  SV+S  +    + LG+ +HG
Sbjct: 225 LVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHG 284

Query: 255 FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
             +R      D  +E++ + +Y+K  K+D   R+F+R   +++V W  +I+    +GS +
Sbjct: 285 QILRAGFYL-DAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSAD 343

Query: 75  KVIRVFKEMVSVDRERPRLSTLVSV 1
           K + VF++M+     +P  +T+ SV
Sbjct: 344 KALAVFRQMLKFG-VKPSTATMASV 367



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/115 (29%), Positives = 55/115 (47%)
 Frame = -1

Query: 393 GAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHGFCIRHEVGKGDVVL 214
           GA  + L     M++  V  +  T  S++ ACS L + SLG ++H   +   +   D  +
Sbjct: 40  GAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSL-DAYI 98

Query: 213 ESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNEKVIRVFKEM 49
            S+ ++ Y K    D   ++FD M  RN+V W  II  Y+  G   +   +F EM
Sbjct: 99  ASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEM 153


>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/145 (37%), Positives = 92/145 (63%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
           +VL+T+M++G+ +NG  ++AL L CRM  EG+ PNE+TM+SV+ ACS L     G+ +H 
Sbjct: 379 LVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHA 438

Query: 255 FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
             I++ +G  +V + SA   MY KC  L+ G  +F RM  R+++SW+ +I+  + +G  +
Sbjct: 439 RTIKYGLGL-EVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGK 497

Query: 75  KVIRVFKEMVSVDRERPRLSTLVSV 1
           + + +F+EM   D  +P   T V+V
Sbjct: 498 EALELFEEMRQQD-TKPDDVTFVNV 521



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/144 (27%), Positives = 76/144 (52%)
 Frame = -1

Query: 432 VLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHGF 253
           + ++ M++G+ ++G   +AL L  RM   G+ P+E T+  V++ACS    +  GK VH +
Sbjct: 279 ITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNY 338

Query: 252 CIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNEK 73
            ++    +  + + +A VDMY K    +   + F+ ++  +LV W  +I  Y  +G NE 
Sbjct: 339 LLKLGF-ESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENED 397

Query: 72  VIRVFKEMVSVDRERPRLSTLVSV 1
            + ++  M  ++   P   T+ SV
Sbjct: 398 ALSLYCRM-QMEGILPNELTMASV 420



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/128 (30%), Positives = 65/128 (50%)
 Frame = -1

Query: 432 VLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHGF 253
           V + TM+SG+       EA  +   M RE    NE   +SV+SA +    +  GK +H  
Sbjct: 178 VTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCL 237

Query: 252 CIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNEK 73
            ++  +     +L +A V MY KC  LD  +++F+    +N ++W  +IT YA  G + K
Sbjct: 238 AVKTGLLVFLSIL-NALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHK 296

Query: 72  VIRVFKEM 49
            +++F  M
Sbjct: 297 ALKLFSRM 304



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEA--LGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSV 262
           V+ +  +++G+ + G    +  + L  RM  + + PN  T S + +A S L  +  G+  
Sbjct: 74  VISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQA 133

Query: 261 HGFCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGS 82
           H   I+      DV + S+ ++MY K   L     +FDRM  RN V+W  +I+ YA    
Sbjct: 134 HAVAIKMACFY-DVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRL 192

Query: 81  NEKVIRVFKEM 49
             +   VF+ M
Sbjct: 193 AGEAFEVFELM 203


>ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/128 (40%), Positives = 84/128 (65%)
 Frame = -1

Query: 432  VLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHGF 253
            V +  M+SG+  NG + +A+GLV  M+++G R ++ T+++V+SAC+ +  +  G  VH  
Sbjct: 626  VSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHAC 685

Query: 252  CIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNEK 73
             IR  + + +VV+ SA VDMY KC K+DY  R F+ M VRN+ SW+ +I+ YA HG   K
Sbjct: 686  AIRACL-EAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGK 744

Query: 72   VIRVFKEM 49
             +++F +M
Sbjct: 745  ALKLFTQM 752



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
 Frame = -1

Query: 435 VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKL--MVMSLGKSV 262
           +V ++ +VSG+ +NG   EA  L   ++  G+ PN   + S + AC +L   ++ LG  +
Sbjct: 105 LVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEI 164

Query: 261 HGFCIRHEVGKGDVVLESAFVDMYVKC-RKLDYGIRIFDRMKVRNLVSWDVIITAYADHG 85
           HG  I       D+VL +  + MY  C   +D   R+F+ +K++   SW+ II+ Y   G
Sbjct: 165 HGL-ISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRG 223

Query: 84  SNEKVIRVFKEMVSVDRERPRLS 16
                I  FK   S+ RE   L+
Sbjct: 224 D---AISAFKLFSSMQREATELN 243



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
 Frame = -1

Query: 390 AVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHGFCIRHEVGKGDVVLE 211
           +V +A+     M++ G +PN VT  +++SA S L ++ LG+ +H   ++H V   D  +E
Sbjct: 538 SVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVA-DDNAIE 596

Query: 210 SAFVDMYVKCRKLDYGIRIFDRM-KVRNLVSWDVIITAYADHGSNEKVI 67
           +  +  Y KC +++    IF RM + R+ VSW+ +I+ Y  +G   K +
Sbjct: 597 NTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAM 645


>ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
            lyrata] gi|297338164|gb|EFH68581.1| hypothetical protein
            ARALYDRAFT_311694 [Arabidopsis lyrata subsp. lyrata]
          Length = 1329

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/145 (37%), Positives = 92/145 (63%)
 Frame = -1

Query: 435  VVLYTTMVSGFCRNGAVKEALGLVCRMVREGVRPNEVTMSSVVSACSKLMVMSLGKSVHG 256
            ++ +TTM++G+ RN   +EA+ +  +M+ EG+ P+EVTMS+V+SAC+ L V+ +GK VH 
Sbjct: 1004 IISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHM 1063

Query: 255  FCIRHEVGKGDVVLESAFVDMYVKCRKLDYGIRIFDRMKVRNLVSWDVIITAYADHGSNE 76
            + +++     DV + SA VDMY KC  L+  + +F  +  +NL  W+ II   A HG  +
Sbjct: 1064 YTVQNGFVL-DVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQ 1122

Query: 75   KVIRVFKEMVSVDRERPRLSTLVSV 1
            + +++F +M  ++  +P   T VSV
Sbjct: 1123 EALKMFAKM-EMESVKPNTVTFVSV 1146