BLASTX nr result

ID: Aconitum21_contig00024980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024980
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron sp...   107   2e-21
ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [S...   104   1e-20
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   104   1e-20
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              104   1e-20
tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea m...   102   5e-20

>ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Brachypodium distachyon]
          Length = 962

 Score =  107 bits (266), Expect = 2e-21
 Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = -2

Query: 309 RKSSTIPLPWERSGLEAMDGGRS-RRNKAEVADKTIPEAELRRLRNISLRMMARIKVRAG 133
           +K  ++ LPWER   +A DG R   R+  E+A+KTIPE ELRRLR+ +LRM  R+++  G
Sbjct: 320 QKLGSVLLPWEREDDDAFDGVRQGNRSNTELAEKTIPEPELRRLRDAALRMKERMRIGPG 379

Query: 132 GVTQALVDRIHXXXXXXXXXKLKFEGPPGFNMKRTHETLESRTG 1
           GVTQA+V  IH         K++FEGPP  NMKRTHE LE RTG
Sbjct: 380 GVTQAIVKSIHSKWSVDEVVKMRFEGPPSLNMKRTHEILEDRTG 423


>ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
           gi|241923491|gb|EER96635.1| hypothetical protein
           SORBIDRAFT_02g022940 [Sorghum bicolor]
          Length = 962

 Score =  104 bits (260), Expect = 1e-20
 Identities = 57/106 (53%), Positives = 70/106 (66%), Gaps = 3/106 (2%)
 Frame = -2

Query: 309 RKSSTIPLPWERSGL--EAMDGGR-SRRNKAEVADKTIPEAELRRLRNISLRMMARIKVR 139
           +K   + LPWER     EA  GGR  RR+  E+A++TIPE ELRRLR+ +LRM  RIKV 
Sbjct: 316 QKLGPVLLPWEREEEDDEAFSGGRVGRRSNTELAERTIPEPELRRLRDTALRMKERIKVG 375

Query: 138 AGGVTQALVDRIHXXXXXXXXXKLKFEGPPGFNMKRTHETLESRTG 1
            GGVTQ +V+ IH         K++FEGPP  NMKRTH+ LE RTG
Sbjct: 376 PGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTG 421


>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 884

 Score =  104 bits (259), Expect = 1e-20
 Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = -2

Query: 312 SRKSSTIPLPWER-SGLEAMDGGRSRRNKAEVADKTIPEAELRRLRNISLRMMARIKVRA 136
           S  SS I LPW+R  GL+ ++     R    +A++ +PE ELRRL+NI+LRM+ RIKV A
Sbjct: 231 SGNSSLIELPWKRREGLQPVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGA 290

Query: 135 GGVTQALVDRIHXXXXXXXXXKLKFEGPPGFNMKRTHETLESRTG 1
            GVTQ+LVD IH         KLKFEGP   NMKRTHE LE+RTG
Sbjct: 291 AGVTQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTG 335


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  104 bits (259), Expect = 1e-20
 Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = -2

Query: 312 SRKSSTIPLPWER-SGLEAMDGGRSRRNKAEVADKTIPEAELRRLRNISLRMMARIKVRA 136
           S  SS I LPW+R  GL+ ++     R    +A++ +PE ELRRL+NI+LRM+ RIKV A
Sbjct: 228 SGNSSLIELPWKRREGLQPVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGA 287

Query: 135 GGVTQALVDRIHXXXXXXXXXKLKFEGPPGFNMKRTHETLESRTG 1
            GVTQ+LVD IH         KLKFEGP   NMKRTHE LE+RTG
Sbjct: 288 AGVTQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTG 332


>tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
          Length = 964

 Score =  102 bits (254), Expect = 5e-20
 Identities = 55/99 (55%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = -2

Query: 288 LPWERSGL--EAMDGGRS-RRNKAEVADKTIPEAELRRLRNISLRMMARIKVRAGGVTQA 118
           LPWER     EA  GGR+ RR+  E+A+++IPE ELRRLR+ +LRM  RIKV  GGVTQ 
Sbjct: 327 LPWEREEEDDEAFSGGRAVRRSNTELAERSIPEPELRRLRDTALRMKERIKVGPGGVTQD 386

Query: 117 LVDRIHXXXXXXXXXKLKFEGPPGFNMKRTHETLESRTG 1
           +V+ IH         K++FEGPP  NMKRTH+ LE RTG
Sbjct: 387 IVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTG 425


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