BLASTX nr result

ID: Aconitum21_contig00024970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024970
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]         169   3e-40
ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...   167   8e-40
emb|CBI23992.3| unnamed protein product [Vitis vinifera]              167   8e-40
emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]   167   8e-40
ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...   154   5e-36

>dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]
          Length = 908

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/150 (57%), Positives = 109/150 (72%), Gaps = 7/150 (4%)
 Frame = -3

Query: 429 RFNKSNAGNLTDLEALGTSQIGPKLLESLLQTKFNGLSGEFWLKDGQLQSSVFQIVNVIG 250
           +F +S  GN TDLEA G S+ GPKLL+++L T F GLSG+F L DGQLQS  +QI+N+IG
Sbjct: 278 KFERSK-GNATDLEAFGVSRDGPKLLKAILNTTFKGLSGDFQLVDGQLQSPPYQIINLIG 336

Query: 249 NGGKQIGFWSPALGISAELGVKMS-SISKNNLGAIIWPGDTTEVPKGWEVPTSEKRLKIG 73
           NG K+IGFW+   GI  +L  +   S+SK+N  +IIWPGDTT VPKGW +PT+ K+LKIG
Sbjct: 337 NGVKEIGFWTREHGIVRKLNSRRGYSVSKDNFRSIIWPGDTTSVPKGWVIPTNGKKLKIG 396

Query: 72  VPVKTGFNEFVKV------NRTTIPGFCIE 1
           VPVK GF EFVKV      N T + G+CI+
Sbjct: 397 VPVKDGFTEFVKVTRDVTTNTTIVTGYCID 426


>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score =  167 bits (423), Expect = 8e-40
 Identities = 87/154 (56%), Positives = 107/154 (69%), Gaps = 12/154 (7%)
 Frame = -3

Query: 426 FNKSN-AGNLTDLEALGTSQIGPKLLESLLQTKFNGLSGEFWLKDGQLQSSVFQIVNVIG 250
           F K+N + N TDL+ +G SQIGPKLL+SLL TKF GLSG+F + DGQL  + FQIVNVIG
Sbjct: 343 FQKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFKGLSGDFQIFDGQLHPTAFQIVNVIG 402

Query: 249 NGGKQIGFWSPALGISAEL-----GVKMSSISKNNLGAIIWPGDTTEVPKGWEVPTSEKR 85
            G + IGFW+P  GI   L          S SK+NLGAI+WPG+ T  PKGW +P +EK+
Sbjct: 403 KGERGIGFWTPKNGIIRRLKFTNANSNTYSTSKDNLGAIVWPGEPTYFPKGWVLPVNEKK 462

Query: 84  LKIGVPVKTGFNEFVKV------NRTTIPGFCIE 1
           LKIGVPVK GF+EFVKV      N T + G+CI+
Sbjct: 463 LKIGVPVKDGFSEFVKVTWDPNTNATKVTGYCID 496


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score =  167 bits (423), Expect = 8e-40
 Identities = 87/154 (56%), Positives = 107/154 (69%), Gaps = 12/154 (7%)
 Frame = -3

Query: 426 FNKSN-AGNLTDLEALGTSQIGPKLLESLLQTKFNGLSGEFWLKDGQLQSSVFQIVNVIG 250
           F K+N + N TDL+ +G SQIGPKLL+SLL TKF GLSG+F + DGQL  + FQIVNVIG
Sbjct: 343 FQKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFKGLSGDFQIFDGQLHPTAFQIVNVIG 402

Query: 249 NGGKQIGFWSPALGISAEL-----GVKMSSISKNNLGAIIWPGDTTEVPKGWEVPTSEKR 85
            G + IGFW+P  GI   L          S SK+NLGAI+WPG+ T  PKGW +P +EK+
Sbjct: 403 KGERGIGFWTPKNGIIRRLKFTNANSNTYSTSKDNLGAIVWPGEPTYFPKGWVLPVNEKK 462

Query: 84  LKIGVPVKTGFNEFVKV------NRTTIPGFCIE 1
           LKIGVPVK GF+EFVKV      N T + G+CI+
Sbjct: 463 LKIGVPVKDGFSEFVKVTWDPNTNATKVTGYCID 496


>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score =  167 bits (423), Expect = 8e-40
 Identities = 87/154 (56%), Positives = 107/154 (69%), Gaps = 12/154 (7%)
 Frame = -3

Query: 426 FNKSN-AGNLTDLEALGTSQIGPKLLESLLQTKFNGLSGEFWLKDGQLQSSVFQIVNVIG 250
           F K+N + N TDL+ +G SQIGPKLL+SLL TKF GLSG+F + DGQL  + FQIVNVIG
Sbjct: 343 FQKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFKGLSGDFQIFDGQLHPTAFQIVNVIG 402

Query: 249 NGGKQIGFWSPALGISAEL-----GVKMSSISKNNLGAIIWPGDTTEVPKGWEVPTSEKR 85
            G + IGFW+P  GI   L          S SK+NLGAI+WPG+ T  PKGW +P +EK+
Sbjct: 403 KGERGIGFWTPKNGIIRRLKFTNANSNTYSTSKDNLGAIVWPGEPTYFPKGWVLPVNEKK 462

Query: 84  LKIGVPVKTGFNEFVKV------NRTTIPGFCIE 1
           LKIGVPVK GF+EFVKV      N T + G+CI+
Sbjct: 463 LKIGVPVKDGFSEFVKVTWDPNTNATKVAGYCID 496


>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 866

 Score =  154 bits (390), Expect = 5e-36
 Identities = 79/154 (51%), Positives = 105/154 (68%), Gaps = 12/154 (7%)
 Frame = -3

Query: 426 FNKSN--AGNLTDLEALGTSQIGPKLLESLLQTKFNGLSGEFWLKDGQLQSSVFQIVNVI 253
           F K+N  + + TDL  LG S  GP +L++L  T F GL+G++ L DGQLQS  FQIVNV 
Sbjct: 323 FQKANVPSNSSTDLATLGISLNGPNILQALSTTSFKGLTGDYLLVDGQLQSPAFQIVNVN 382

Query: 252 GNGGKQIGFWSPALGI----SAELGVKMSSISKNNLGAIIWPGDTTEVPKGWEVPTSEKR 85
           GNGG+ IGFW+P  G+    +  +  +M+S S + +  +I+PGDTT VPKGWE+PT+EK+
Sbjct: 383 GNGGRGIGFWTPTEGLVKKMNPRINKRMNSTSTSRVSTVIFPGDTTAVPKGWEIPTNEKK 442

Query: 84  LKIGVPVKTGFNEFVKV------NRTTIPGFCIE 1
           LKIGVP+K GF+E V V      N TT  GFCI+
Sbjct: 443 LKIGVPLKAGFSELVAVTKDPGSNTTTFTGFCID 476


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