BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024938
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    86   2e-15
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    86   2e-15
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t...    79   3e-13
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    78   7e-13
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    76   3e-12

>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
 Frame = +2

Query: 5   DPLPPISRVYALVTQEECQKSSLKERDLQPDNLAFTAHSPALARP-----SITLPLDRSS 169
           DP P +  +Y+ V +EE + +S++ R+ Q   + F      +        SI    DRS 
Sbjct: 219 DPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSV 278

Query: 170 LHCNHCGRDGHDAATCWKIVGYPDWFHEKKNTG------RGRGKQSVFGRGQSGRGRGNF 331
           L C+HCGR GH+   CW+IVG+PDW+ E+ N G      RGRG +S  G   SGRGRG  
Sbjct: 279 L-CSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRGGRS-SGSNNSGRGRGQV 336

Query: 332 GVANA 346
             A+A
Sbjct: 337 TAAHA 341


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
 Frame = +2

Query: 5   DPLPPISRVYALVTQEECQKSSLKERDLQPDNLAFTAHSPALARP-----SITLPLDRSS 169
           DP P +  +Y+ V +EE + +S++ R+ Q   + F      +        SI    DRS 
Sbjct: 219 DPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSV 278

Query: 170 LHCNHCGRDGHDAATCWKIVGYPDWFHEKKNTG------RGRGKQSVFGRGQSGRGRGNF 331
           L C+HCGR GH+   CW+IVG+PDW+ E+ N G      RGRG +S  G   SGRGRG  
Sbjct: 279 L-CSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRGGRS-SGSNNSGRGRGQV 336

Query: 332 GVANA 346
             A+A
Sbjct: 337 TAAHA 341


>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 370

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
 Frame = +2

Query: 5   DPLPPISRVYALVTQEECQKSSLKERDLQPDNLAFTAH--------SPALARPSITLPLD 160
           DPLP +   Y+ V +EE +  + + ++ + + + F A         SPA +    ++   
Sbjct: 218 DPLPSLGVAYSQVIREEQRIHASRTQEQRQEVVGFVARHEQSSAMSSPAQSSIESSIVKS 277

Query: 161 RSSLHCNHCGRDGHDAATCWKIVGYPDWFHEKKNTGRGRGKQSVFGRGQSGRGRGNFGV- 337
           R  L C+HCGR GH+   CW IVG+PDW+ E+   GRG G+    GRG  G GRG   + 
Sbjct: 278 RPVL-CSHCGRTGHEKKDCWSIVGFPDWWTERNGNGRGSGR----GRGGRGAGRGKGQIV 332

Query: 338 ------ANAAPHS 358
                 +N +PH+
Sbjct: 333 AAHATSSNPSPHT 345


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/128 (36%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
 Frame = +2

Query: 5   DPLPPISRVYALVTQEECQKSSLKERDLQPDNLAFTAHSPALARPSITLPLDRSSLHCNH 184
           DPLP + ++YA+VTQEE  +S  +  D        T  +    +P         S  C H
Sbjct: 97  DPLPTLGKIYAMVTQEERHRSMARGAD----RAEITVFAAXTEKPG---GQTNKSGSCTH 149

Query: 185 CGRDGHDAATCWKIVGYPDWFHEK---KNTGRGRGKQSVFGRG-QSGRGRGNFGVANAAP 352
           CG+ GHD A C+++ GYPDW+  +   +  GRGRG+ S  GRG  SGR      VA A  
Sbjct: 150 CGKTGHDVADCFQLKGYPDWWPTRQMGRGRGRGRGRNSYAGRGATSGRVHYXNAVAEADT 209

Query: 353 HSAPAIVG 376
                 VG
Sbjct: 210 QEKGQCVG 217


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
 Frame = +2

Query: 5   DPLPPISRVYALVTQEE--CQKSSLKERDLQPDNLAFTAHS------PALARPSITLPLD 160
           DPLP +++VY+ V  EE     S +K+ D++ + + FT  +      P +A  S     D
Sbjct: 199 DPLPALNQVYSRVIHEEQNLNASRIKD-DIKTEAVGFTVQATPLPPTPQVAAVSAPRFRD 257

Query: 161 RSSLHCNHCGRDGHDAATCWKIVGYPDWFHEKKNTGRGRGKQSVFGRGQSGRGRGNFG 334
           RSSL C H  R GHD   C+ + GYPDW+ E +N   G   +   GRG +GRG  N G
Sbjct: 258 RSSLTCTHYHRQGHDITECFLVHGYPDWWLE-QNGSNGSAGRGTSGRGNNGRGNNNRG 314