BLASTX nr result

ID: Aconitum21_contig00024926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024926
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]   114   1e-23
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   114   1e-23
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   113   3e-23
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   108   9e-22
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   103   3e-20

>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score =  114 bits (286), Expect = 1e-23
 Identities = 71/211 (33%), Positives = 106/211 (50%), Gaps = 29/211 (13%)
 Frame = +2

Query: 29  LQKVILSS--SPLSSDCIAMAICTNKGRFILAFARPGGWRWTTLPTPKDYIHDVIFYKNQ 202
           L KV+LSS  SP +++C+ MAI +N  +  LAF +PG  RW TL +      D+++YK+ 
Sbjct: 147 LNKVVLSSTPSPSNANCVIMAIHSNYNK--LAFCKPGDKRWITLKSEDIQYKDLLYYKDN 204

Query: 203 FYGINMCGLLMVCDLGDGVNPPKAIQLNDFFKPFSWKEMNYLVEWMGELLYVIKFMDYDD 382
           FY I    ++  CD+GD    P+ I          + +  YLVE  G LLYV+++MD  D
Sbjct: 205 FYAIGRSKVVQ-CDIGDD---PRVIPFA-LLPKMGYFQYRYLVESSGCLLYVLRYMDLKD 259

Query: 383 ES---------------------------YKLNRFEVYVFDFSDKSWNELKNLGDYSLFL 481
                                        Y+   F+VY FDF  K W  +KN+ + +L L
Sbjct: 260 NEDPLKLRYETTGFKVFDLDSDKRKFSYRYETTTFKVYNFDFDQKKWKLIKNIKEKALLL 319

Query: 482 GLNTSVAVLTSQCPGLKRNCIYFTDDFSHGF 574
           G N ++++ T +  G K N IYF DD+  G+
Sbjct: 320 GHNQAISISTKKFDGFKSNHIYFLDDYKEGY 350


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  114 bits (285), Expect = 1e-23
 Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 9/192 (4%)
 Frame = +2

Query: 17  RDACLQKVILSSSPLS-SDCIAMAICTNKGRFILAFARPGGWRWTTLPTPKDYIHDVIFY 193
           RD+ ++K ILSSSP + SD IA+ I    G   LA  R     WT L   + Y  DVIF+
Sbjct: 158 RDSFIKKTILSSSPANGSDFIAVVILNQTGD--LALCRKSDDSWTFLEDAQSYAEDVIFH 215

Query: 194 KNQFYGINMCGLLMVCDLGDGVNPPKAIQLNDFFKPFSWKEMNYLVEWMGELLYVIKFMD 373
           +  FY +N  G + VCD+         I++   F      ++ YLVE   ELL V +++D
Sbjct: 216 RGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGG----DLQYLVESGEELLLVTRYLD 271

Query: 374 --YDDES------YKLNRFEVYVFDFSDKSWNELKNLGDYSLFLGLNTSVAVLTSQCPGL 529
             YD E       Y+  RF+V   D     W  + +LGD +LFLG N S+++ +   PG 
Sbjct: 272 LTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGC 331

Query: 530 KRNCIYFTDDFS 565
           K NCIY+TDD+S
Sbjct: 332 KGNCIYYTDDYS 343


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  113 bits (282), Expect = 3e-23
 Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 9/192 (4%)
 Frame = +2

Query: 17  RDACLQKVILSSSPLS-SDCIAMAICTNKGRFILAFARPGGWRWTTLPTPKDYIHDVIFY 193
           RD+ ++K ILSSSP + SD IA+ I    G   LA  R     WT L   + Y  DVIF+
Sbjct: 158 RDSFIKKTILSSSPANGSDFIAVVILNQTGD--LALCRKSDDSWTFLEDAQSYSEDVIFH 215

Query: 194 KNQFYGINMCGLLMVCDLGDGVNPPKAIQLNDFFKPFSWKEMNYLVEWMGELLYVIKFMD 373
           +  FY +N  G + VCD+         I++   F      ++ YLVE   ELL V +++D
Sbjct: 216 RGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGG----DLQYLVESGEELLLVTRYLD 271

Query: 374 --YDDES------YKLNRFEVYVFDFSDKSWNELKNLGDYSLFLGLNTSVAVLTSQCPGL 529
             YD E       Y+  RF+V   D     W  + +LGD +LFLG N S+++ +   PG 
Sbjct: 272 LTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGC 331

Query: 530 KRNCIYFTDDFS 565
           K NCIY+TDD+S
Sbjct: 332 KGNCIYYTDDYS 343


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  108 bits (269), Expect = 9e-22
 Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
 Frame = +2

Query: 17  RDACLQKVILSSSPLSSD---CIAMAICTNKGRFILAFARPGGWRWTTLPTPKDYIHDVI 187
           RD  ++KV++SSSPL       +AMAI  + G   LA+ + G   W  +   + +  DVI
Sbjct: 160 RDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGD--LAYCKNGDECWNIVENSRSFSEDVI 217

Query: 188 FYKNQFYGINMCGLLMVCDLGDGVNPPKAIQLNDFFKPFSWKEMNYLVEWMGELLYVIKF 367
           ++   FY +N  G ++VCD+    N PK   +    +     +M YLV     LL V ++
Sbjct: 218 YFNGLFYAVNKAGQIVVCDVNG--NSPKVSFIETPRQIGG--DMQYLVSSGDGLLLVTRY 273

Query: 368 MDYDDES----YKLNRFEVYVFDFSDKSWNELKNLGDYSLFLGLNTSVAVLTSQCPGLKR 535
           +D D E     YK  RFEV+  D +   W  + +LGD  LF+G N+S+A+  S   G   
Sbjct: 274 LDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMG 333

Query: 536 NCIYFTDDFS 565
           +CIY+TDD+S
Sbjct: 334 DCIYYTDDYS 343


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  103 bits (256), Expect = 3e-20
 Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
 Frame = +2

Query: 17  RDACLQKVILSSSPLSSDCIAMAICTNKGRFILAFARPGGWRWTTLPTPKDYIHDVIFYK 196
           RD+ ++KV+LSSSPL  +   +    N+    LA+ R G   W+ +   + +  DVIF  
Sbjct: 161 RDSFIRKVVLSSSPLKDNNFVVIAILNQTDD-LAYCRNGDKSWSLVENARSFCEDVIFVN 219

Query: 197 NQFYGINMCGLLMVCDLGDGVNPPKAIQLNDFFKPFSWKEMNYLVEWMGELLYVIKFMDY 376
             FY +N  G +++CD+    + P+   +    +  +  +M YLV    ELL V +++D 
Sbjct: 220 GMFYAVNKAGQIVICDISS--DSPRVSFMETPRQ--AGGDMQYLVNSGDELLLVTRYLDL 275

Query: 377 DDES----------YKLNRFEVYVFDFSDKSWNELKNLGDYSLFLGLNTSVAVLTSQCPG 526
           + E           Y+  RFEV+  D++   W  +  LGD +LF+G N+S+++  +   G
Sbjct: 276 EYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSG 335

Query: 527 LKRNCIYFTDDF 562
              NCIY+TDD+
Sbjct: 336 CMGNCIYYTDDY 347


Top