BLASTX nr result

ID: Aconitum21_contig00024885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024885
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138715.1| PREDICTED: 40S ribosomal protein S11-3-like ...    58   7e-07
ref|XP_004144894.1| PREDICTED: 40S ribosomal protein S11-3-like ...    58   9e-07
gb|AAA34006.1| ribosomal protein S11, partial [Glycine max]            58   9e-07
gb|AFK49430.1| unknown [Lotus japonicus]                               58   9e-07
gb|AFK46727.1| unknown [Lotus japonicus]                               58   9e-07

>ref|XP_004138715.1| PREDICTED: 40S ribosomal protein S11-3-like isoform 1 [Cucumis
           sativus] gi|449493332|ref|XP_004159258.1| PREDICTED: 40S
           ribosomal protein S11-3-like isoform 1 [Cucumis sativus]
          Length = 165

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = -3

Query: 216 GSCRKNKLVRIKIARWNYIQFIKNFQRYELWHSYVPVHMSQGFRVKEGVQKNQQNTQKIS 37
           G+C   K+VR  I R NY+ ++K +QRYE  HS +P H++  FRVKEG        + I 
Sbjct: 74  GTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHIAPCFRVKEGDHVIIGQCRFIH 133

Query: 36  S-PMYKYFLVT 7
             P+Y +FL T
Sbjct: 134 ELPIYLWFLYT 144


>ref|XP_004144894.1| PREDICTED: 40S ribosomal protein S11-3-like [Cucumis sativus]
           gi|449471994|ref|XP_004153463.1| PREDICTED: 40S
           ribosomal protein S11-3-like [Cucumis sativus]
           gi|449522568|ref|XP_004168298.1| PREDICTED: 40S
           ribosomal protein S11-3-like [Cucumis sativus]
          Length = 159

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/48 (52%), Positives = 33/48 (68%)
 Frame = -3

Query: 216 GSCRKNKLVRIKIARWNYIQFIKNFQRYELWHSYVPVHMSQGFRVKEG 73
           G+C   K+VR  I R NY+ ++K +QRYE  HS +P H+S  FRVKEG
Sbjct: 74  GTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKEG 121


>gb|AAA34006.1| ribosomal protein S11, partial [Glycine max]
          Length = 141

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = -3

Query: 216 GSCRKNKLVRIKIARWNYIQFIKNFQRYELWHSYVPVHMSQGFRVKEG 73
           G+C   K+ R  I R NY+ FIK +QRYE  HS +P H+S  FRVKEG
Sbjct: 56  GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEG 103


>gb|AFK49430.1| unknown [Lotus japonicus]
          Length = 159

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = -3

Query: 216 GSCRKNKLVRIKIARWNYIQFIKNFQRYELWHSYVPVHMSQGFRVKEG 73
           G+C   K+ R  I R NY+ FIK +QRYE  HS +P H+S  FRVKEG
Sbjct: 74  GTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEG 121


>gb|AFK46727.1| unknown [Lotus japonicus]
          Length = 151

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = -3

Query: 216 GSCRKNKLVRIKIARWNYIQFIKNFQRYELWHSYVPVHMSQGFRVKEG 73
           G+C   K+ R  I R NY+ FIK +QRYE  HS +P H+S  FRVKEG
Sbjct: 74  GTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEG 121


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