BLASTX nr result

ID: Aconitum21_contig00024846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024846
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus ...   129   3e-28
emb|CBI20833.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis...   125   5e-27
ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glyci...   121   5e-26
ref|XP_002308504.1| f-box family protein [Populus trichocarpa] g...   121   5e-26

>ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544660|gb|EEF46176.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 412

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/89 (70%), Positives = 74/89 (83%), Gaps = 3/89 (3%)
 Frame = -3

Query: 260 TRKRKLSEDD---VCFALDELNQDLLERVLSWLPTSSFMRLTSVSKRWKSVANSDSFRFA 90
           +RKRK  E+D   V   LDELNQDLLERVLSWLPTS+F RL SV KRWKSVA+S SF+FA
Sbjct: 12  SRKRKSQEEDHDMVSICLDELNQDLLERVLSWLPTSTFFRLRSVCKRWKSVADSTSFKFA 71

Query: 89  CSRVPTRDPWFFMVDPHLHQSIVFDTAEK 3
           CS VP+RDPWFFMVDP+L++  VFD+AE+
Sbjct: 72  CSEVPSRDPWFFMVDPNLNKWTVFDSAER 100


>emb|CBI20833.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/86 (68%), Positives = 72/86 (83%)
 Frame = -3

Query: 260 TRKRKLSEDDVCFALDELNQDLLERVLSWLPTSSFMRLTSVSKRWKSVANSDSFRFACSR 81
           +RKRK       F LD+LNQDLLERVLSWLPTS F RLTSV KRWKS+A+S +F+ ACS+
Sbjct: 13  SRKRK-------FPLDDLNQDLLERVLSWLPTSVFFRLTSVCKRWKSIADSATFQLACSQ 65

Query: 80  VPTRDPWFFMVDPHLHQSIVFDTAEK 3
           +P+RDPWFFMVDPHL+Q +VFD+AE+
Sbjct: 66  IPSRDPWFFMVDPHLNQWVVFDSAER 91


>ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis vinifera]
          Length = 472

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/86 (68%), Positives = 72/86 (83%)
 Frame = -3

Query: 260 TRKRKLSEDDVCFALDELNQDLLERVLSWLPTSSFMRLTSVSKRWKSVANSDSFRFACSR 81
           +RKRK       F LD+LNQDLLERVLSWLPTS F RLTSV KRWKS+A+S +F+ ACS+
Sbjct: 78  SRKRK-------FPLDDLNQDLLERVLSWLPTSVFFRLTSVCKRWKSIADSATFQLACSQ 130

Query: 80  VPTRDPWFFMVDPHLHQSIVFDTAEK 3
           +P+RDPWFFMVDPHL+Q +VFD+AE+
Sbjct: 131 IPSRDPWFFMVDPHLNQWVVFDSAER 156


>ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 407

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/73 (79%), Positives = 64/73 (87%)
 Frame = -3

Query: 224 FALDELNQDLLERVLSWLPTSSFMRLTSVSKRWKSVANSDSFRFACSRVPTRDPWFFMVD 45
           F+LD+LN+DLLERVLSWLPTSSF RLTSV KRWKS A S SF+ ACSRVP RDPWF MV 
Sbjct: 21  FSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSAAASVSFKLACSRVPLRDPWFLMVA 80

Query: 44  PHLHQSIVFDTAE 6
           P+L+QSIVFDTAE
Sbjct: 81  PNLNQSIVFDTAE 93


>ref|XP_002308504.1| f-box family protein [Populus trichocarpa]
           gi|222854480|gb|EEE92027.1| f-box family protein
           [Populus trichocarpa]
          Length = 409

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/93 (59%), Positives = 73/93 (78%), Gaps = 3/93 (3%)
 Frame = -3

Query: 272 SKNTTRKRKLSEDD---VCFALDELNQDLLERVLSWLPTSSFMRLTSVSKRWKSVANSDS 102
           +   +RKRKL   D   +  ++DELN+DLLERVLSWLPTS+F R  SV KRWKSV++S S
Sbjct: 8   ASRASRKRKLEAQDKGMLSLSMDELNEDLLERVLSWLPTSAFFRAASVCKRWKSVSDSAS 67

Query: 101 FRFACSRVPTRDPWFFMVDPHLHQSIVFDTAEK 3
           F+ ACS +P+R+PWF MVDPHL+QS +FD+A++
Sbjct: 68  FKLACSEIPSREPWFLMVDPHLNQSTIFDSADR 100


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