BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024719
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC94893.1| polyprotein [Oryza australiensis]                      210   1e-52
gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group...   208   3e-52
gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japoni...   208   3e-52
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc...   207   5e-52
gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subc...   207   5e-52

>gb|ABC94893.1| polyprotein [Oryza australiensis]
          Length = 1469

 Score =  210 bits (534), Expect = 1e-52
 Identities = 99/137 (72%), Positives = 116/137 (84%)
 Frame = +3

Query: 3    YEFPVMPFGLTNAPAYFMDMMNRLFHPYLDQYVIVFIDDILVYSKSEEDHAVHLRTVLEV 182
            YEF VM FGLTNAPAYFM++MN++F  YLD++V+VFIDDIL+YSK++E+HA HLR VLE 
Sbjct: 658  YEFTVMSFGLTNAPAYFMNLMNKVFMEYLDKFVVVFIDDILIYSKNDEEHAEHLRLVLEK 717

Query: 183  LKEHQLYAKFPKYKFWEKEVRFLGHVISKKGIAVDPEKVRAVQEWKTPKDVTEVRSFLGL 362
            L+EH+LYAKF K +FW KEV FLGHV+S  G+AVDP KV AV EWK PK VTEVRSFLGL
Sbjct: 718  LREHRLYAKFSKCEFWLKEVAFLGHVVSAGGVAVDPAKVEAVMEWKAPKSVTEVRSFLGL 777

Query: 363  AGYYRRFIEKFSWIALP 413
            AGYYRRFIE FS +A P
Sbjct: 778  AGYYRRFIEGFSTVARP 794


>gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711716|gb|ABF99511.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1312

 Score =  208 bits (530), Expect = 3e-52
 Identities = 100/137 (72%), Positives = 115/137 (83%)
 Frame = +3

Query: 3   YEFPVMPFGLTNAPAYFMDMMNRLFHPYLDQYVIVFIDDILVYSKSEEDHAVHLRTVLEV 182
           YEF VM FGLTNAPAYFM++MN++F  YLD++V+VFIDDIL+YSK EE+HA HLR VLE 
Sbjct: 574 YEFTVMSFGLTNAPAYFMNLMNKVFVDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLEK 633

Query: 183 LKEHQLYAKFPKYKFWEKEVRFLGHVISKKGIAVDPEKVRAVQEWKTPKDVTEVRSFLGL 362
           L++H+LYAKF K +FW KEV FLGHVIS  G+AVDP KV AV EWK PK VTE+RSFLGL
Sbjct: 634 LRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGL 693

Query: 363 AGYYRRFIEKFSWIALP 413
           AGYYRRFIE FS IA P
Sbjct: 694 AGYYRRFIEGFSKIARP 710


>gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 823

 Score =  208 bits (530), Expect = 3e-52
 Identities = 100/137 (72%), Positives = 115/137 (83%)
 Frame = +3

Query: 3   YEFPVMPFGLTNAPAYFMDMMNRLFHPYLDQYVIVFIDDILVYSKSEEDHAVHLRTVLEV 182
           YEF VM FGLTNAPAYFM++MN++F  YLD++V+VFIDDIL+YSK EE+HA HLR VLE 
Sbjct: 110 YEFTVMSFGLTNAPAYFMNLMNKVFVDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLEK 169

Query: 183 LKEHQLYAKFPKYKFWEKEVRFLGHVISKKGIAVDPEKVRAVQEWKTPKDVTEVRSFLGL 362
           L++H+LYAKF K +FW KEV FLGHVIS  G+AVDP KV AV EWK PK VTE+RSFLGL
Sbjct: 170 LRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGL 229

Query: 363 AGYYRRFIEKFSWIALP 413
           AGYYRRFIE FS IA P
Sbjct: 230 AGYYRRFIEGFSKIARP 246


>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1470

 Score =  207 bits (528), Expect = 5e-52
 Identities = 99/137 (72%), Positives = 115/137 (83%)
 Frame = +3

Query: 3    YEFPVMPFGLTNAPAYFMDMMNRLFHPYLDQYVIVFIDDILVYSKSEEDHAVHLRTVLEV 182
            YEF VM FGLTNAPAYFM++MN++F  YLD++V+VFIDDIL+YSK EE+HA HLR VL+ 
Sbjct: 659  YEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQK 718

Query: 183  LKEHQLYAKFPKYKFWEKEVRFLGHVISKKGIAVDPEKVRAVQEWKTPKDVTEVRSFLGL 362
            L++H+LYAKF K +FW KEV FLGHVIS  G+AVDP KV AV EWK PK VTE+RSFLGL
Sbjct: 719  LRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGL 778

Query: 363  AGYYRRFIEKFSWIALP 413
            AGYYRRFIE FS IA P
Sbjct: 779  AGYYRRFIEGFSKIARP 795


>gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1710

 Score =  207 bits (528), Expect = 5e-52
 Identities = 99/137 (72%), Positives = 115/137 (83%)
 Frame = +3

Query: 3    YEFPVMPFGLTNAPAYFMDMMNRLFHPYLDQYVIVFIDDILVYSKSEEDHAVHLRTVLEV 182
            YEF VM FGLTNAPAYFM++MN++F  YLD++V+VFIDDIL+YSK EE+HA HLR VL+ 
Sbjct: 1022 YEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQK 1081

Query: 183  LKEHQLYAKFPKYKFWEKEVRFLGHVISKKGIAVDPEKVRAVQEWKTPKDVTEVRSFLGL 362
            L++H+LYAKF K +FW KEV FLGHVIS  G+AVDP KV AV EWK PK VTE+RSFLGL
Sbjct: 1082 LRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGL 1141

Query: 363  AGYYRRFIEKFSWIALP 413
            AGYYRRFIE FS IA P
Sbjct: 1142 AGYYRRFIEGFSKIARP 1158