BLASTX nr result
ID: Aconitum21_contig00024677
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00024677
(609 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containi... 66 6e-26
ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containi... 66 1e-19
tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea m... 50 2e-13
ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi... 50 2e-12
emb|CBI15839.3| unnamed protein product [Vitis vinifera] 50 2e-12
>ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 65.9 bits (159), Expect(3) = 6e-26
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 8/57 (14%)
Frame = +1
Query: 238 NTIRSFFAGDDSHPYWGEIYKMLESLRMQIEAS--------VHRDVGEQMKVKLLWG 384
N + +FFA DDSHP W +IY++LE+LR+++EA V RDV E MKVKLLWG
Sbjct: 696 NKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWG 752
Score = 53.5 bits (127), Expect(3) = 6e-26
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +3
Query: 384 TERLAIAFALISTPSGSLIRITKNLSVCADCY 479
+ERLAIAF L+STP GSLI+ITKNL VC DC+
Sbjct: 754 SERLAIAFGLLSTPCGSLIKITKNLRVCVDCH 785
Score = 43.9 bits (102), Expect(3) = 6e-26
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 14/66 (21%)
Frame = +2
Query: 80 HKNIDIGIKTADRLLSLDALNPGMC--------------SIKYIC*RREVD*RGVRKTPG 217
HKN ++GI+ ADRL+SLD LN G+ S+ YI R + +G++K PG
Sbjct: 631 HKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYI--RGLMRMQGMKKIPG 688
Query: 218 YSLTEV 235
YSL EV
Sbjct: 689 YSLIEV 694
>ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 65.9 bits (159), Expect(2) = 1e-19
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Frame = +1
Query: 145 WNVFYKIYMLKAGGGLKRCEKNPWV*LD*SSNTIRSFFAGDDSHPYWGEIYKMLESLRMQ 324
W+ I L GLK K P L + N + +FFAGD+SHP W EIY LESLR
Sbjct: 652 WDKVDYIRGLMRNRGLK---KTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSA 708
Query: 325 IEAS--------VHRDVGEQMKVKLLWG 384
+E S V RDV E+MKV++LWG
Sbjct: 709 VETSGYVPDTSCVLRDVDEEMKVRMLWG 736
Score = 56.2 bits (134), Expect(2) = 1e-19
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +3
Query: 384 TERLAIAFALISTPSGSLIRITKNLSVCADCYT 482
+ERLAIAF L++TP+GSLIRITKNL VC DC+T
Sbjct: 738 SERLAIAFGLLTTPAGSLIRITKNLRVCGDCHT 770
>tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 49.7 bits (117), Expect(3) = 2e-13
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = +3
Query: 363 EGKIALGTERLAIAFALISTPSGSLIRITKNLSVCADCYT 482
E +A +E+LA+AF L++TP+GS +RITKNL C DC++
Sbjct: 501 ERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHS 540
Score = 35.8 bits (81), Expect(3) = 2e-13
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Frame = +1
Query: 238 NTIRSFFAGDDSHPYWGEIYKMLESLRMQIEAS--------VHRDVGEQMKVKLL 378
NTI F +GD SHP EIYKML + ++ + V +D+ EQ K + L
Sbjct: 450 NTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERAL 504
Score = 35.0 bits (79), Expect(3) = 2e-13
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 3 LIQQMPFKPDSVVLEALLNGCAKFKFIRILI*ESKLQIDCLVWMP*TLECVL*NIYAEGG 182
LI+ MPF+PD+V+ ALL C +K + + E+ ++ L +L NIYA+
Sbjct: 362 LIRDMPFEPDAVIWRALLGACRIYKNVEVAE-EAMAKLRVLDPHADGHYVLLSNIYAQAN 420
Query: 183 RW 188
W
Sbjct: 421 SW 422
>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 50.4 bits (119), Expect(4) = 2e-12
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +3
Query: 363 EGKIALGTERLAIAFALISTPSGSLIRITKNLSVCADCYT 482
EG I +ER+A+AF L+STP G IR+ KNL C+DC++
Sbjct: 503 EGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHS 542
Score = 29.6 bits (65), Expect(4) = 2e-12
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 235 SNTIRSFFAGDDSHPYWGEIYKMLESLRMQIEASVH 342
+N + F AGD SHP + +I L+ + +++ H
Sbjct: 451 NNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGH 486
Score = 28.5 bits (62), Expect(4) = 2e-12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 3 LIQQMPFKPDSVVLEALLNGC 65
LI+ MP KP+S+VL +LL C
Sbjct: 364 LIRAMPMKPNSMVLGSLLRAC 384
Score = 27.7 bits (60), Expect(4) = 2e-12
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Frame = +2
Query: 74 QIHKNIDIGIKTADRLLSLDALNPG---MCSIKYIC*RREVD*---------RGVRKTPG 217
QIHK+ +G + +LL LD + G S Y R D RGV KTPG
Sbjct: 385 QIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPG 444
Query: 218 YSLTEV 235
S EV
Sbjct: 445 CSSIEV 450
>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 50.4 bits (119), Expect(4) = 2e-12
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +3
Query: 363 EGKIALGTERLAIAFALISTPSGSLIRITKNLSVCADCYT 482
EG I +ER+A+AF L+STP G IR+ KNL C+DC++
Sbjct: 431 EGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHS 470
Score = 29.6 bits (65), Expect(4) = 2e-12
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 235 SNTIRSFFAGDDSHPYWGEIYKMLESLRMQIEASVH 342
+N + F AGD SHP + +I L+ + +++ H
Sbjct: 379 NNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGH 414
Score = 28.5 bits (62), Expect(4) = 2e-12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 3 LIQQMPFKPDSVVLEALLNGC 65
LI+ MP KP+S+VL +LL C
Sbjct: 292 LIRAMPMKPNSMVLGSLLRAC 312
Score = 27.7 bits (60), Expect(4) = 2e-12
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Frame = +2
Query: 74 QIHKNIDIGIKTADRLLSLDALNPG---MCSIKYIC*RREVD*---------RGVRKTPG 217
QIHK+ +G + +LL LD + G S Y R D RGV KTPG
Sbjct: 313 QIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPG 372
Query: 218 YSLTEV 235
S EV
Sbjct: 373 CSSIEV 378