BLASTX nr result

ID: Aconitum21_contig00024647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024647
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17281.3| unnamed protein product [Vitis vinifera]              188   3e-46
ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated...   188   3e-46
ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated...   184   5e-45
ref|XP_003601650.1| Small subunit processome component-like prot...   182   3e-44
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm...   180   9e-44

>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  188 bits (478), Expect = 3e-46
 Identities = 97/132 (73%), Positives = 116/132 (87%)
 Frame = -2

Query: 398 MATPSHARAVKSLNTSSGSKRFVYKSFAQRIEEIDIGENVFRSLVPLDAEPSPGSTFFRD 219
           MAT  HA+AVKSLN SSG KRFV+K+F+QR+EEI+I  +VFRSL PL  EPS GS+FFRD
Sbjct: 1   MATSFHAQAVKSLNKSSGRKRFVFKNFSQRLEEIEI--DVFRSLDPLKTEPSEGSSFFRD 58

Query: 218 CLLKWREENTAEDFISFYEEVMPWVQTLPQILLHKETIMSKLLSRLQVQARLSLEPILCL 39
           CL++WRE NTAEDFISFYEE+MP VQTLPQ+LLHKE I+SK+L+RL++ ARLSLEP+L L
Sbjct: 59  CLVQWRELNTAEDFISFYEEMMPLVQTLPQVLLHKELIISKVLARLEMTARLSLEPMLRL 118

Query: 38  IVALSRDLLKDF 3
           I ALSRDLL+DF
Sbjct: 119 IGALSRDLLEDF 130


>ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Vitis
           vinifera]
          Length = 224

 Score =  188 bits (478), Expect = 3e-46
 Identities = 97/132 (73%), Positives = 116/132 (87%)
 Frame = -2

Query: 398 MATPSHARAVKSLNTSSGSKRFVYKSFAQRIEEIDIGENVFRSLVPLDAEPSPGSTFFRD 219
           MAT  HA+AVKSLN SSG KRFV+K+F+QR+EEI+I  +VFRSL PL  EPS GS+FFRD
Sbjct: 1   MATSFHAQAVKSLNKSSGRKRFVFKNFSQRLEEIEI--DVFRSLDPLKTEPSEGSSFFRD 58

Query: 218 CLLKWREENTAEDFISFYEEVMPWVQTLPQILLHKETIMSKLLSRLQVQARLSLEPILCL 39
           CL++WRE NTAEDFISFYEE+MP VQTLPQ+LLHKE I+SK+L+RL++ ARLSLEP+L L
Sbjct: 59  CLVQWRELNTAEDFISFYEEMMPLVQTLPQVLLHKELIISKVLARLEMTARLSLEPMLRL 118

Query: 38  IVALSRDLLKDF 3
           I ALSRDLL+DF
Sbjct: 119 IGALSRDLLEDF 130


>ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like
           [Glycine max]
          Length = 2653

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/132 (70%), Positives = 113/132 (85%)
 Frame = -2

Query: 398 MATPSHARAVKSLNTSSGSKRFVYKSFAQRIEEIDIGENVFRSLVPLDAEPSPGSTFFRD 219
           MAT S ARAVKSLN S G +RFV+KSF+ R++EIDI  NV+RSL  + AEPS GS+FFRD
Sbjct: 1   MATASQARAVKSLNKSPGGRRFVFKSFSDRVDEIDI--NVYRSLDKVKAEPSEGSSFFRD 58

Query: 218 CLLKWREENTAEDFISFYEEVMPWVQTLPQILLHKETIMSKLLSRLQVQARLSLEPILCL 39
           CL++WRE NTAEDFIS YEE+MP+ QTLP +LLHKE+++SKLLSRL ++ARLSLEPIL L
Sbjct: 59  CLIEWRELNTAEDFISLYEEIMPYTQTLPLVLLHKESLISKLLSRLHIKARLSLEPILRL 118

Query: 38  IVALSRDLLKDF 3
           I ALSRDLL++F
Sbjct: 119 IAALSRDLLEEF 130


>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago
           truncatula] gi|355490698|gb|AES71901.1| Small subunit
           processome component-like protein [Medicago truncatula]
          Length = 2733

 Score =  182 bits (461), Expect = 3e-44
 Identities = 92/132 (69%), Positives = 112/132 (84%)
 Frame = -2

Query: 398 MATPSHARAVKSLNTSSGSKRFVYKSFAQRIEEIDIGENVFRSLVPLDAEPSPGSTFFRD 219
           MATP+HA+AVKSLN S G +RFV+KSF+ R+++IDI  NV+RSL  + AEPS GS+FFRD
Sbjct: 1   MATPAHAQAVKSLNKSPGRRRFVFKSFSDRVDDIDI--NVYRSLHKVKAEPSEGSSFFRD 58

Query: 218 CLLKWREENTAEDFISFYEEVMPWVQTLPQILLHKETIMSKLLSRLQVQARLSLEPILCL 39
           CL++WRE NT EDFIS YEEV+P  QTLP +LLHKET++SKLLSRL ++ARLSLEPIL L
Sbjct: 59  CLVEWRELNTTEDFISLYEEVIPCTQTLPLVLLHKETLISKLLSRLHMKARLSLEPILRL 118

Query: 38  IVALSRDLLKDF 3
           I ALSRDLL +F
Sbjct: 119 IAALSRDLLDEF 130


>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
           gi|223542637|gb|EEF44174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2535

 Score =  180 bits (457), Expect = 9e-44
 Identities = 94/132 (71%), Positives = 114/132 (86%)
 Frame = -2

Query: 398 MATPSHARAVKSLNTSSGSKRFVYKSFAQRIEEIDIGENVFRSLVPLDAEPSPGSTFFRD 219
           MAT SHA+AVKSLN S G +RFV+KS +QRI EI+I  +V+RSL  + ++PS GS+FFRD
Sbjct: 1   MATASHAQAVKSLNKSPGGRRFVFKSLSQRIVEIEI--DVYRSLDKVKSQPSEGSSFFRD 58

Query: 218 CLLKWREENTAEDFISFYEEVMPWVQTLPQILLHKETIMSKLLSRLQVQARLSLEPILCL 39
           CL++WRE NTAEDFISFYE++MP VQTLP ILLHKE+I S+LLSRLQ++ARLSLEPIL L
Sbjct: 59  CLVEWRELNTAEDFISFYEKMMPLVQTLPLILLHKESIFSELLSRLQMKARLSLEPILRL 118

Query: 38  IVALSRDLLKDF 3
           I ALSRDLL+DF
Sbjct: 119 IAALSRDLLEDF 130


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