BLASTX nr result

ID: Aconitum21_contig00024532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024532
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]   276   1e-72
emb|CBI22376.3| unnamed protein product [Vitis vinifera]              274   7e-72
ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containi...   271   8e-71
ref|XP_002521979.1| pentatricopeptide repeat-containing protein,...   267   1e-69
ref|XP_002892464.1| pentatricopeptide repeat-containing protein ...   261   5e-68

>emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
          Length = 550

 Score =  276 bits (707), Expect = 1e-72
 Identities = 133/190 (70%), Positives = 154/190 (81%)
 Frame = +1

Query: 13  SKTSSKPTWYCFDGPFVDNDQESNNEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCI 192
           SK  S  +   FDG FV ND+E+NNE+LQ+ C+ GKL+ AS LI+VMAR++QIP FP+CI
Sbjct: 110 SKKYSNSSNSSFDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCI 169

Query: 193 NLIRGLINFNRLEKAAEVLKVMVMSGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFS 372
           NLIRGLI     E+A  VLK+MVMSGG+PDIITYNMLVGGLCKK  LKTAI+LL +MS S
Sbjct: 170 NLIRGLIKLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLS 229

Query: 373 GCPPDVITYNTILRCMFDYGQYDQAIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERA 552
           GCPPD ITYNTILRCMFD+G +DQAI FWKDQLR GCP Y ITYTVLIELVC+HCG  +A
Sbjct: 230 GCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQA 289

Query: 553 MQVLEAMEHE 582
           M+VLE M  E
Sbjct: 290 MEVLEDMAIE 299



 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 51/163 (31%), Positives = 82/163 (50%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N +L S CT+G   E   ++ +M   SQ P       LI GL  +  L++A      MV 
Sbjct: 344 NTLLHSLCTHGYWDEVDEILLIMNMTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVS 403

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
              +PDIITYN L+  LCK+  +  A+ LL  ++ + C P +ITYN ++  +   G  ++
Sbjct: 404 HNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEK 463

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
           A+  + + +  G  P  IT+  L   + R    E A+ +L+ M
Sbjct: 464 AMGLYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEM 506



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/157 (29%), Positives = 75/157 (47%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N ++   C  GK  + + +I  +      PN      L+  L      ++  E+L +M M
Sbjct: 309 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNM 368

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
           +   P ++TYN+L+ GLCK   L  AI+    M    C PD+ITYNT+L  +   G  D+
Sbjct: 369 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 428

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAM 555
           A+          C P  ITY ++I+ + +    E+AM
Sbjct: 429 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAM 465



 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 39/161 (24%), Positives = 80/161 (49%)
 Frame = +1

Query: 91  VLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVMSG 270
           +++  C +   ++A  ++  MA +   P+     +L+       + E  A ++  ++  G
Sbjct: 276 LIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHG 335

Query: 271 GVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQAI 450
             P+ +TYN L+  LC   +     ++L  M+ +  PP V+TYN ++  +  YG  D+AI
Sbjct: 336 MGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNMTSQPPTVVTYNILINGLCKYGLLDRAI 395

Query: 451 QFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
            F+   + + C P  ITY  L+  +C+    + A+ +L ++
Sbjct: 396 NFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSL 436


>emb|CBI22376.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  274 bits (701), Expect = 7e-72
 Identities = 132/190 (69%), Positives = 153/190 (80%)
 Frame = +1

Query: 13  SKTSSKPTWYCFDGPFVDNDQESNNEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCI 192
           SK  S  +    DG FV ND+E+NNE+LQ+ C+ GKL+ AS LI+VMAR++QIP FP+CI
Sbjct: 110 SKKYSNSSNSSLDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCI 169

Query: 193 NLIRGLINFNRLEKAAEVLKVMVMSGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFS 372
           NLIRGLI     E+A  VLK+MVMSGG+PDIITYNMLVGGLCKK  LKTAI+LL +MS S
Sbjct: 170 NLIRGLIKLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLS 229

Query: 373 GCPPDVITYNTILRCMFDYGQYDQAIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERA 552
           GCPPD ITYNTILRCMFD+G +DQAI FWKDQLR GCP Y ITYTVLIELVC+HCG  +A
Sbjct: 230 GCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQA 289

Query: 553 MQVLEAMEHE 582
           M+VLE M  E
Sbjct: 290 MEVLEDMAIE 299



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 51/163 (31%), Positives = 83/163 (50%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N +L S CT+G   E   ++ +M   SQ P       LI GL  +  L++A      MV 
Sbjct: 344 NTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVS 403

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
              +PDIITYN L+  LCK+  +  A+ LL  ++ + C P +ITYN ++  +   G  ++
Sbjct: 404 HNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEK 463

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
           A++ + + +  G  P  IT+  L   + R    E A+ +L+ M
Sbjct: 464 AMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEM 506



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/163 (28%), Positives = 77/163 (47%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N ++   C  GK  + + +I  +      PN      L+  L      ++  E+L +M  
Sbjct: 309 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 368

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
           +   P ++TYN+L+ GLCK   L  AI+    M    C PD+ITYNT+L  +   G  D+
Sbjct: 369 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 428

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
           A+          C P  ITY ++I+ + +    E+AM++   M
Sbjct: 429 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEM 471



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/161 (24%), Positives = 80/161 (49%)
 Frame = +1

Query: 91  VLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVMSG 270
           +++  C +   ++A  ++  MA +   P+     +L+       + E  A ++  ++  G
Sbjct: 276 LIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHG 335

Query: 271 GVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQAI 450
             P+ +TYN L+  LC   +     ++L  M+ +  PP V+TYN ++  +  YG  D+AI
Sbjct: 336 MGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAI 395

Query: 451 QFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
            F+   + + C P  ITY  L+  +C+    + A+ +L ++
Sbjct: 396 NFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSL 436


>ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  271 bits (692), Expect = 8e-71
 Identities = 128/177 (72%), Positives = 148/177 (83%)
 Frame = +1

Query: 52  GPFVDNDQESNNEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLE 231
           G FV ND+E+NNE+LQ+ C+ GKL+ AS LI+VMAR++QIP FP+CINLIRGLI     E
Sbjct: 32  GSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTE 91

Query: 232 KAAEVLKVMVMSGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTIL 411
           +A  VLK+MVMSGG+PDIITYNMLVGGLCKK  LKTAI+LL +MS SGCPPD ITYNTIL
Sbjct: 92  RATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTIL 151

Query: 412 RCMFDYGQYDQAIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAMEHE 582
           RCMFD+G +DQAI FWKDQLR GCP Y ITYTVLIELVC+HCG  +AM+VLE M  E
Sbjct: 152 RCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIE 208



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 51/163 (31%), Positives = 83/163 (50%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N +L S CT+G   E   ++ +M   SQ P       LI GL  +  L++A      MV 
Sbjct: 253 NTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVS 312

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
              +PDIITYN L+  LCK+  +  A+ LL  ++ + C P +ITYN ++  +   G  ++
Sbjct: 313 HNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEK 372

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
           A++ + + +  G  P  IT+  L   + R    E A+ +L+ M
Sbjct: 373 AMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEM 415



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/163 (28%), Positives = 77/163 (47%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N ++   C  GK  + + +I  +      PN      L+  L      ++  E+L +M  
Sbjct: 218 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 277

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
           +   P ++TYN+L+ GLCK   L  AI+    M    C PD+ITYNT+L  +   G  D+
Sbjct: 278 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 337

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
           A+          C P  ITY ++I+ + +    E+AM++   M
Sbjct: 338 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEM 380



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/161 (24%), Positives = 80/161 (49%)
 Frame = +1

Query: 91  VLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVMSG 270
           +++  C +   ++A  ++  MA +   P+     +L+       + E  A ++  ++  G
Sbjct: 185 LIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHG 244

Query: 271 GVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQAI 450
             P+ +TYN L+  LC   +     ++L  M+ +  PP V+TYN ++  +  YG  D+AI
Sbjct: 245 MGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAI 304

Query: 451 QFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
            F+   + + C P  ITY  L+  +C+    + A+ +L ++
Sbjct: 305 NFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSL 345


>ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538783|gb|EEF40383.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  267 bits (682), Expect = 1e-69
 Identities = 123/190 (64%), Positives = 153/190 (80%)
 Frame = +1

Query: 13  SKTSSKPTWYCFDGPFVDNDQESNNEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCI 192
           +K    P  Y  +GPFV+N++E NNE+LQ  C  G+L++A  LI+VMAR+SQIPNF  C 
Sbjct: 79  TKNHVSPKSY-IEGPFVENEEEINNEILQHLCNKGRLMDAPRLIDVMARRSQIPNFSCCT 137

Query: 193 NLIRGLINFNRLEKAAEVLKVMVMSGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFS 372
           NLIRG I  +++ KAA +LK+MVMSGGVPD+ITYNM+VGGLCK+  LK+AIDLL+DMS S
Sbjct: 138 NLIRGFIKVDQINKAARILKIMVMSGGVPDVITYNMMVGGLCKRGKLKSAIDLLEDMSLS 197

Query: 373 GCPPDVITYNTILRCMFDYGQYDQAIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERA 552
           GCPPDV+TYNTI+RCMF    +DQA++FWK+QLR GCPPY ITYT+LIELVC+HCG  RA
Sbjct: 198 GCPPDVVTYNTIIRCMFHNANFDQAVRFWKEQLRRGCPPYLITYTILIELVCKHCGTVRA 257

Query: 553 MQVLEAMEHE 582
           M+VLE M  E
Sbjct: 258 MEVLEDMAIE 267



 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
 Frame = +1

Query: 70  DQESNNEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVL 249
           D  + N ++   C  GK  +A+ +I  M      PN      L+  L +    ++  E+L
Sbjct: 272 DLVTYNSLVNFTCKQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEIL 331

Query: 250 KVMVMSGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRC---- 417
            VM  +   P ++TYN L+ GLCK   +  AID    M +  C PD++TYNT+L      
Sbjct: 332 TVMKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKE 391

Query: 418 ---MFDYGQYDQAIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
              M    Q++ A++  ++  +      S  Y  +I+ +C +   + A+QVLE M
Sbjct: 392 ECWMSPSSQFEDAVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIM 446



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/117 (32%), Positives = 59/117 (50%)
 Frame = +1

Query: 232 KAAEVLKVMVMSGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTIL 411
           +A EVL+ M + G  PD++TYN LV   CK+   + A  ++ +M   G  P+ ITYNT+L
Sbjct: 256 RAMEVLEDMAIEGCYPDLVTYNSLVNFTCKQGKYEDAALIIINMLSHGMEPNAITYNTLL 315

Query: 412 RCMFDYGQYDQAIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAMEHE 582
             +   G +D+  +          PP  +TY  LI  +C+     RA+     M +E
Sbjct: 316 HSLCSCGLWDEVDEILTVMKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVYE 372



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
 Frame = +1

Query: 91  VLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVMSG 270
           +++  C +   + A  ++  MA +   P+     +L+       + E AA ++  M+  G
Sbjct: 244 LIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTCKQGKYEDAALIIINMLSHG 303

Query: 271 GVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQAI 450
             P+ ITYN L+  LC         ++L  M  +  PP V+TYNT++  +   G  ++AI
Sbjct: 304 MEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVVTYNTLINGLCKSGLVNRAI 363

Query: 451 QFWKDQLRNGCPPYSITYTVLIELVCR-HCGAERAMQVLEAME 576
            F+   +   C P  +TY  L+  +C+  C    + Q  +A+E
Sbjct: 364 DFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAVE 406



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N +L S C+ G   E   ++ VM   S  P       LI GL     + +A +    MV 
Sbjct: 312 NTLLHSLCSCGLWDEVDEILTVMKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVY 371

Query: 265 SGGVPDIITYNMLVGGLCKKR-------HLKTAIDLLKDMSFSGCPPDVITYNTILRCMF 423
              +PDI+TYN L+G LCK+          + A+++L++M       +   Y +++  + 
Sbjct: 372 ENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAVEILREMGKRDHRINSYAYRSVIDGLC 431

Query: 424 DYGQYDQAIQFWKDQLRNGCPPYSITYTVLI 516
           +  + D AIQ  +  + + C P    Y+ LI
Sbjct: 432 NNKKTDIAIQVLEIMISSRCKPDEEIYSALI 462


>ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338306|gb|EFH68723.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 555

 Score =  261 bits (668), Expect = 5e-68
 Identities = 115/178 (64%), Positives = 149/178 (83%)
 Frame = +1

Query: 49  DGPFVDNDQESNNEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRL 228
           DGP  +ND+E+NNE+L + C+NGKL +A  L+ VMAR +Q+P+FP+C NL+RGL   ++L
Sbjct: 92  DGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQL 151

Query: 229 EKAAEVLKVMVMSGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTI 408
           +KA  +L++MVMSGGVPD ITYNM++G LCKK H+++A+ LL+DMS SG PPDVITYNT+
Sbjct: 152 DKAMVILRIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTV 211

Query: 409 LRCMFDYGQYDQAIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAMEHE 582
           +RCMFD+G  +QAI+FWKDQLRNGCPPY ITYTVL+ELVCR+CG+ RAM VLE M  E
Sbjct: 212 IRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVE 269



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 50/163 (30%), Positives = 77/163 (47%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N ++   C  G L E + +I  +       N      L+  L +    ++  E+L +M  
Sbjct: 279 NSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQ 338

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
           +   P +ITYN+L+ GLCK R L  AID    M    C PD++TYNT+L  M   G  D 
Sbjct: 339 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDD 398

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
           AI+         C P  ITY  +I+ + R    ++A+++   M
Sbjct: 399 AIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHM 441



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 52/161 (32%), Positives = 80/161 (49%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N +L S C+N    E   ++N+M + S  P       LI GL     L +A +    M+ 
Sbjct: 314 NTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLE 373

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
              +PDI+TYN L+G + K+  +  AI+LL  +  + C P +ITYN+++  +   G   +
Sbjct: 374 QKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKK 433

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLE 567
           A++ +   L  G  P  IT   LI   CR    E A QVL+
Sbjct: 434 ALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLK 474



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/126 (30%), Positives = 64/126 (50%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N V+      G + +A  L + M      P+     +LI G    N +E+A++VLK    
Sbjct: 419 NSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSN 478

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
            G      TY +++ GLCKKR ++ AI++++ M  SGC PD   Y  I++ + + G   +
Sbjct: 479 RGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAIVKGVEEMGMGSE 538

Query: 445 AIQFWK 462
           A+Q  K
Sbjct: 539 AVQLQK 544



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/145 (25%), Positives = 70/145 (48%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N +L +    G + +A  L+ ++   S +P      ++I GL     ++KA E+   M+ 
Sbjct: 384 NTLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLD 443

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
           +G  PD IT   L+ G C+   ++ A  +LK+ S  G      TY  +++ +    + + 
Sbjct: 444 AGISPDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEM 503

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIE 519
           AI+  +  L +GC P    YT +++
Sbjct: 504 AIEVVEIMLTSGCKPDETIYTAIVK 528



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/163 (23%), Positives = 71/163 (43%)
 Frame = +1

Query: 85  NEVLQSFCTNGKLIEASHLINVMARKSQIPNFPNCINLIRGLINFNRLEKAAEVLKVMVM 264
           N V++    +G   +A        R    P       L+  +  +    +A +VL+ M +
Sbjct: 209 NTVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAV 268

Query: 265 SGGVPDIITYNMLVGGLCKKRHLKTAIDLLKDMSFSGCPPDVITYNTILRCMFDYGQYDQ 444
            G  PDI+TYN LV   C++ +L+    +++ +   G   + +TYNT+L  +     +D+
Sbjct: 269 EGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDE 328

Query: 445 AIQFWKDQLRNGCPPYSITYTVLIELVCRHCGAERAMQVLEAM 573
             +      +    P  ITY +LI  +C+     RA+     M
Sbjct: 329 VEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQM 371


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