BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024516
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT39281.2| Integrase core domain containing protein [Solanum...   144   7e-33
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   138   6e-31
emb|CCH50966.1| T4.5 [Malus x robusta]                                136   2e-30
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   134   7e-30
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   132   3e-29

>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
          Length = 1760

 Score =  144 bits (364), Expect = 7e-33
 Identities = 75/180 (41%), Positives = 100/180 (55%), Gaps = 1/180 (0%)
 Frame = +2

Query: 5   GNEQVMAGDGKHVPISHIGNTTLKTSSSSFRLTNVLCVPFIKKNLLSVAQFTRDNDCKFE 184
           G E++  GDG  +PISH GNT L  S+  F+L N LC   IK NLLSV++F RDN    E
Sbjct: 334 GPEEIAMGDGNTIPISHTGNTNLSASNQQFKLLNTLCSHSIKNNLLSVSKFCRDNHTSIE 393

Query: 185 FFPWGYVVKDLKTGTPLFEGSVQGNLYP-PLNVEHHSQGPHKAFLTLKAPASVWHCRLGH 361
           FFP+ Y VKDL TG PLF G  +  LY  PL   HH+         +  P  +WH RLGH
Sbjct: 394 FFPFSYCVKDLSTGAPLFRGQNRDGLYEWPLGSAHHTPQ-----CNVVVPLHLWHRRLGH 448

Query: 362 PAVDVIQVLHKNKDIQFSPAATTHSSVCHSCQMGKSTRLPFYNSKRVSTSPLSLVHCDIW 541
           P    + ++     +  S + T  +S+C+SC   K  RLPF  +   S  PL +++ D+W
Sbjct: 449 PNHRTLNMIFHQFSLPVSHSRT--ASICNSCYSNKMHRLPFSENSLQSQRPLQIIYTDLW 506


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  138 bits (347), Expect = 6e-31
 Identities = 70/182 (38%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
 Frame = +2

Query: 5   GNEQVMAGDGKHVPISHIGNTTLKTSSSSFRLTNVLCVPFIKKNLLSVAQFTRDNDCKFE 184
           G + ++ GDG  + I+H G++ L  +S SF L+NVLC P IK+NL+SV++F + N+   E
Sbjct: 336 GPDDILLGDGSGLEITHTGSSKLPATSKSFCLSNVLCXPSIKQNLISVSKFCKTNNTSIE 395

Query: 185 FFPWGYVVKDLKTGTPLFEGSVQGNLYP---PLNVEHHSQGPHKAFLTLKAPASVWHCRL 355
           FFP  +V+KDLKTG  L +G  + ++Y    P         P +A +++K   + WH RL
Sbjct: 396 FFPSSFVIKDLKTGARLTQGRSKDDVYEWPWPNKGNTLGTSPKQACVSVKTSLANWHHRL 455

Query: 356 GHPAVDVIQVLHKNKDIQFSPAATTHSSVCHSCQMGKSTRLPFYNSKRVSTSPLSLVHCD 535
           GHP+  + Q L +  ++Q  P  + H+  C SC   KS +LPF  S   S   L LV+ D
Sbjct: 456 GHPSSRIFQFLIRKHNLQIYPTESFHNFFCESCLCNKSHKLPFGVSSLRSRGXLDLVYSD 515

Query: 536 IW 541
           +W
Sbjct: 516 VW 517


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  136 bits (343), Expect = 2e-30
 Identities = 79/185 (42%), Positives = 104/185 (56%), Gaps = 5/185 (2%)
 Frame = +2

Query: 2    SGNEQVMAGDGKHVPISHIGNTTLKTSSSSFRLTNVLCVPFIKKNLLSVAQFTRDNDCKF 181
            SGN+Q+  GDGK + ISH G+  ++T  ++FRL +VL VP    NLLSV +F  DN C  
Sbjct: 615  SGNDQLFVGDGKGLCISHTGSALIRTKHATFRLNDVLLVPQASHNLLSVYKFVYDNWCYL 674

Query: 182  EFFPWGYVVKDLKTGTPLFEGSVQGNLYP-PLNVEHHSQG---PHKAFLTLKAPASVWHC 349
             F P+G+ VKDL TG  LF+G  +G LYP   N  +   G      A +  KA    WH 
Sbjct: 675  TFDPFGFYVKDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHR 734

Query: 350  RLGHPAVDVI-QVLHKNKDIQFSPAATTHSSVCHSCQMGKSTRLPFYNSKRVSTSPLSLV 526
            RLGHP+   +  V+HKN           + SVC +CQ+GKS RL F      S+ PL L+
Sbjct: 735  RLGHPSGGTLHSVVHKNHLPVI--GYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLL 792

Query: 527  HCDIW 541
            H D+W
Sbjct: 793  HTDVW 797


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  134 bits (338), Expect = 7e-30
 Identities = 67/180 (37%), Positives = 108/180 (60%)
 Frame = +2

Query: 2   SGNEQVMAGDGKHVPISHIGNTTLKTSSSSFRLTNVLCVPFIKKNLLSVAQFTRDNDCKF 181
           +G++ +M  DG  +PI+H G+ +L TS++ F LTNVLCVP +KKNL+S+++    N+   
Sbjct: 257 NGSDDIMIDDGTGLPITHTGSLSLHTSNAQFSLTNVLCVPGMKKNLISISKLXISNNVSI 316

Query: 182 EFFPWGYVVKDLKTGTPLFEGSVQGNLYPPLNVEHHSQGPHKAFLTLKAPASVWHCRLGH 361
            F P  ++VKDL+TG  L +G  +  +Y     E     P  AF ++K  +S WH RLGH
Sbjct: 317 TFLPSSFLVKDLRTGATLLKGKTKDGVY-----EWLVSSPLLAFSSVKTSSSEWHHRLGH 371

Query: 362 PAVDVIQVLHKNKDIQFSPAATTHSSVCHSCQMGKSTRLPFYNSKRVSTSPLSLVHCDIW 541
           PA  +++ +    ++  S ++  H S C++C   KS +L F NS   S+ PL +++ D+W
Sbjct: 372 PAFPILKHVISTNNLALSSSSLLHFS-CNTCHCNKSHKLSFSNSTINSSRPLQILYSDVW 430


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  132 bits (332), Expect = 3e-29
 Identities = 72/175 (41%), Positives = 96/175 (54%)
 Frame = +2

Query: 17  VMAGDGKHVPISHIGNTTLKTSSSSFRLTNVLCVPFIKKNLLSVAQFTRDNDCKFEFFPW 196
           V  G+G   P+  IG+ TL   S SF L NVL  P I KNL+SV +F  DN C  EF P+
Sbjct: 391 VTVGNGSLAPVETIGHGTLSYPSRSFSLRNVLVCPAIVKNLVSVRKFVTDNWCTIEFDPF 450

Query: 197 GYVVKDLKTGTPLFEGSVQGNLYPPLNVEHHSQGPHKAFLTLKAPASVWHCRLGHPAVDV 376
           G+ VKDLKT   L      G LY      + S   H A     + + +WH RLGHP+  +
Sbjct: 451 GFSVKDLKTRNKLLRCDSSGPLYSVTPSSYPSS--HHALAATTSDSFIWHRRLGHPSSTL 508

Query: 377 IQVLHKNKDIQFSPAATTHSSVCHSCQMGKSTRLPFYNSKRVSTSPLSLVHCDIW 541
           +   H    +  S   T  +S+C +CQ+GK TRLPF+NS  +++S   +VH DIW
Sbjct: 509 LS--HLLSSLSISVPKTDLTSLCQACQLGKHTRLPFFNSNTIASSLFEIVHSDIW 561